CircRNA Information

General Information
circRNA Basic Information
CircID chr1:203849723|203849950
Strand +
CircType exon
Host Gene ENSG00000058673.14;
Algorism CIRI2;
Sequence CTCCACCTTCTGGGATGACTTTGTGGGAAGCCGCTTGGTCAGGTGCCGTGTGATTCCTGGCACAGCAGTGAGCACTGGTTTCTCTGCCACTTGGGTATTGCAAGAGGCTACATCTCCCCGAAGAGGTGTCAAGACTGATTTTTCCCTCTCCTGCTGTTTCTGCATGTGCTTCTCTCTCATGGTCTCACATCTCTTGACTTGAATTTTAGTGATGTCAACTCCTGTGGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:203849723|203849950 hsa-miR-26b-5p 0 0 1
chr1:203849723|203849950 hsa-miR-26b-3p 0 0 1
chr1:203849723|203849950 hsa-miR-214-5p 0 0 1
chr1:203849723|203849950 hsa-miR-214-3p 0 0 1
chr1:203849723|203849950 hsa-miR-335-5p 0 0 1
chr1:203849723|203849950 hsa-miR-335-3p 0 0 1
chr1:203849723|203849950 hsa-miR-489-5p 0 0 1
chr1:203849723|203849950 hsa-miR-489-3p 0 0 1
chr1:203849723|203849950 hsa-miR-591 0 0 1
chr1:203849723|203849950 hsa-miR-622 0 0 1
chr1:203849723|203849950 hsa-miR-298 1 0 1
chr1:203849723|203849950 hsa-miR-1178-5p 0 0 1
chr1:203849723|203849950 hsa-miR-1178-3p 0 0 1
chr1:203849723|203849950 hsa-miR-1227-5p 0 0 1
chr1:203849723|203849950 hsa-miR-1227-3p 0 0 1
chr1:203849723|203849950 hsa-miR-1297 0 0 1
chr1:203849723|203849950 hsa-miR-1825 0 0 1
chr1:203849723|203849950 hsa-miR-769-5p 0 0 1
chr1:203849723|203849950 hsa-miR-542-5p 0 0 1
chr1:203849723|203849950 hsa-miR-188-3p 0 0 1
chr1:203849723|203849950 hsa-miR-576-3p 0 0 1
chr1:203849723|203849950 hsa-miR-140-3p 0 1 1
chr1:203849723|203849950 hsa-miR-34c-3p 0 0 1
chr1:203849723|203849950 hsa-miR-548c-3p 0 0 1
chr1:203849723|203849950 hsa-miR-1260 0 0 1
chr1:203849723|203849950 hsa-miR-26a 0 0 1
chr1:203849723|203849950 hsa-miR-514 0 0 1
chr1:203849723|203849950 hsa-miR-219-1-3p 0 0 1
chr1:203849723|203849950 hsa-miR-499-3p 0 0 1
chr1:203849723|203849950 hsa-miR-936 1 1 0
chr1:203849723|203849950 hsa-miR-3175 1 0 0
chr1:203849723|203849950 hsa-miR-3665 1 0 0
chr1:203849723|203849950 hsa-miR-3919 0 1 0
chr1:203849723|203849950 hsa-miR-4530 1 0 0
chr1:203849723|203849950 hsa-miR-4644 1 0 0
chr1:203849723|203849950 hsa-miR-4706 1 0 0
chr1:203849723|203849950 hsa-miR-6127 1 0 0
chr1:203849723|203849950 hsa-miR-6165 1 1 0
chr1:203849723|203849950 hsa-miR-8085 1 0 0
chr1:203849723|203849950 hsa-miR-12115 1 0 0
chr1:203849723|203849950 hsa-miR-4433b-3p 1 0 0
chr1:203849723|203849950 hsa-miR-4433a-3p 1 0 0
chr1:203849723|203849950 hsa-miR-671-5p 1 0 0
chr1:203849723|203849950 hsa-miR-7106-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6825-5p 1 1 0
chr1:203849723|203849950 hsa-miR-3692-3p 0 1 0
chr1:203849723|203849950 hsa-miR-125a-3p 1 0 0
chr1:203849723|203849950 hsa-miR-6510-5p 1 1 0
chr1:203849723|203849950 hsa-miR-4786-5p 0 1 0
chr1:203849723|203849950 hsa-miR-6757-5p 0 1 0
chr1:203849723|203849950 hsa-miR-6746-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6727-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6760-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6782-5p 1 0 0
chr1:203849723|203849950 hsa-miR-4690-5p 1 0 0
chr1:203849723|203849950 hsa-miR-149-3p 1 0 0
chr1:203849723|203849950 hsa-miR-1304-3p 0 1 0
chr1:203849723|203849950 hsa-miR-6886-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6826-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6720-3p 1 0 0
chr1:203849723|203849950 hsa-miR-4712-3p 0 1 0
chr1:203849723|203849950 hsa-miR-514a-3p 0 1 0
chr1:203849723|203849950 hsa-miR-4763-3p 1 0 0
chr1:203849723|203849950 hsa-miR-6865-5p 0 1 0
chr1:203849723|203849950 hsa-miR-1343-5p 1 0 0
chr1:203849723|203849950 hsa-miR-1249-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6722-3p 1 0 0
chr1:203849723|203849950 hsa-miR-6780a-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6879-5p 1 0 0
chr1:203849723|203849950 hsa-miR-1909-3p 1 0 0
chr1:203849723|203849950 hsa-miR-4649-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6777-5p 1 0 0
chr1:203849723|203849950 hsa-miR-939-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6731-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6856-5p 1 0 0
chr1:203849723|203849950 hsa-miR-6891-5p 1 0 0
chr1:203849723|203849950 hsa-miR-3622a-3p 0 1 0
chr1:203849723|203849950 hsa-miR-6819-3p 0 1 0
chr1:203849723|203849950 hsa-miR-6859-5p 0 1 0
chr1:203849723|203849950 hsa-miR-514b-3p 0 1 0
chr1:203849723|203849950 hsa-miR-499b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:203849723|203849950
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MLFLHVLLSHGLTSLDLNFSDVNSCG
Nucleotide Sequence CTGCTGTTTCTGCATGTGCTTCTCTCTCATGGTCTCACATCTCTTGACTTGAATTTTAGTGATGTCAACTCCTGTGGT

CircID chr1:203849723|203849950
ORF Type ORF2
Protein Length 55
Nucleotide Length 168
Protein Sequence MVRCRVIPGTAVSTGFSATWVLQEATSPRRGVKTDFSLSCCFCMCFSLMVSHLLT
Nucleotide Sequence TTGGTCAGGTGCCGTGTGATTCCTGGCACAGCAGTGAGCACTGGTTTCTCTGCCACTTGGGTATTGCAAGAGGCTACATCTCCCCGAAGAGGTGTCAAGACTGATTTTTCCCTCTCCTGCTGTTTCTGCATGTGCTTCTCTCTCATGGTCTCACATCTCTTGACTTGA

CircID chr1:203849723|203849950
ORF Type ORF3
Protein Length 40
Nucleotide Length 123
Protein Sequence MVSLPLGYCKRLHLPEEVSRLIFPSPAVSACASLSWSHIS
Nucleotide Sequence CTGGTTTCTCTGCCACTTGGGTATTGCAAGAGGCTACATCTCCCCGAAGAGGTGTCAAGACTGATTTTTCCCTCTCCTGCTGTTTCTGCATGTGCTTCTCTCTCATGGTCTCACATCTCTTGA

CircID chr1:203849723|203849950
ORF Type ORF4
Protein Length 60
Nucleotide Length 180
Protein Sequence MREKHMQKQQEREKSVLTPLRGDVASCNTQVAEKPVLTAVPGITRHLTKRLPTKSSQKVE
Nucleotide Sequence ATGAGAGAGAAGCACATGCAGAAACAGCAGGAGAGGGAAAAATCAGTCTTGACACCTCTTCGGGGAGATGTAGCCTCTTGCAATACCCAAGTGGCAGAGAAACCAGTGCTCACTGCTGTGCCAGGAATCACACGGCACCTGACCAAGCGGCTTCCCACAAAGTCATCCCAGAAGGTGGAG

CircID chr1:203849723|203849950
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MQYPSGRETSAHCCARNHTAPDQAASHKVIPEGG
Nucleotide Sequence TTGCAATACCCAAGTGGCAGAGAAACCAGTGCTCACTGCTGTGCCAGGAATCACACGGCACCTGACCAAGCGGCTTCCCACAAAGTCATCCCAGAAGGTGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites