CircRNA Information

General Information
circRNA Basic Information
CircID chr1:204132021|204132252
Strand +
CircType exon
Host Gene ENSG00000143845.13;
Algorism CIRI2;
Sequence GCAGTGATCCGATTCAACCAGTACTTCAAGGTGAAGCCTCAAGCGTCAGCCTTGGAGATGCCAAAGTGACCAGCCACCCCATCCCTCCCCTACCCATCTGTCTGGCCAGACCTGTTCTCCAGAGCTCAATTCTGCACTCTGGGATCCACACCCTTGGACAGGGTGGGAGAGGGGACACATGGGTGTCCAGGGAGAAGGCTCTGTCCCTGCCGCCAGACCCCAGTGGTTGCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:204132021|204132252 hsa-miR-96-5p 0 0 1
chr1:204132021|204132252 hsa-miR-96-3p 0 0 1
chr1:204132021|204132252 hsa-miR-10a-5p 0 0 1
chr1:204132021|204132252 hsa-miR-10a-3p 0 0 1
chr1:204132021|204132252 hsa-miR-10b-5p 0 0 1
chr1:204132021|204132252 hsa-miR-10b-3p 0 0 1
chr1:204132021|204132252 hsa-miR-182-5p 0 0 1
chr1:204132021|204132252 hsa-miR-182-3p 0 0 1
chr1:204132021|204132252 hsa-miR-150-5p 0 0 1
chr1:204132021|204132252 hsa-miR-150-3p 0 0 1
chr1:204132021|204132252 hsa-miR-412-5p 0 0 1
chr1:204132021|204132252 hsa-miR-412-3p 0 0 1
chr1:204132021|204132252 hsa-miR-563 0 0 1
chr1:204132021|204132252 hsa-miR-573 0 0 1
chr1:204132021|204132252 hsa-miR-608 1 1 1
chr1:204132021|204132252 hsa-miR-1271-5p 0 0 1
chr1:204132021|204132252 hsa-miR-1271-3p 0 0 1
chr1:204132021|204132252 hsa-miR-298 0 0 1
chr1:204132021|204132252 hsa-miR-1304-5p 0 0 1
chr1:204132021|204132252 hsa-miR-1304-3p 0 0 1
chr1:204132021|204132252 hsa-miR-1278 0 0 1
chr1:204132021|204132252 hsa-miR-1324 0 0 1
chr1:204132021|204132252 hsa-miR-127-3p 0 0 1
chr1:204132021|204132252 hsa-miR-532-3p 0 1 1
chr1:204132021|204132252 hsa-miR-615-5p 0 0 1
chr1:204132021|204132252 hsa-miR-485-5p 0 0 1
chr1:204132021|204132252 hsa-miR-339-5p 0 0 1
chr1:204132021|204132252 hsa-miR-1224-3p 0 0 1
chr1:204132021|204132252 hsa-miR-1207-5p 1 0 1
chr1:204132021|204132252 hsa-miR-342-5p 0 0 1
chr1:204132021|204132252 hsa-miR-515-5p 0 0 1
chr1:204132021|204132252 hsa-miR-1260 0 0 1
chr1:204132021|204132252 hsa-miR-1280 0 0 1
chr1:204132021|204132252 hsa-miR-516b 0 0 1
chr1:204132021|204132252 hsa-miR-658 1 0 0
chr1:204132021|204132252 hsa-miR-762 1 0 0
chr1:204132021|204132252 hsa-miR-940 1 0 0
chr1:204132021|204132252 hsa-miR-1231 0 1 0
chr1:204132021|204132252 hsa-miR-1260a 0 1 0
chr1:204132021|204132252 hsa-miR-1275 1 0 0
chr1:204132021|204132252 hsa-miR-3132 1 0 0
chr1:204132021|204132252 hsa-miR-3141 1 0 0
chr1:204132021|204132252 hsa-miR-1260b 0 1 0
chr1:204132021|204132252 hsa-miR-3175 1 0 0
chr1:204132021|204132252 hsa-miR-4259 1 0 0
chr1:204132021|204132252 hsa-miR-3911 1 1 0
chr1:204132021|204132252 hsa-miR-3929 0 1 0
chr1:204132021|204132252 hsa-miR-3936 1 0 0
chr1:204132021|204132252 hsa-miR-4466 1 0 0
chr1:204132021|204132252 hsa-miR-4478 0 1 0
chr1:204132021|204132252 hsa-miR-4488 1 0 0
chr1:204132021|204132252 hsa-miR-2392 1 0 0
chr1:204132021|204132252 hsa-miR-4507 1 0 0
chr1:204132021|204132252 hsa-miR-4510 1 0 0
chr1:204132021|204132252 hsa-miR-4525 1 0 0
chr1:204132021|204132252 hsa-miR-1587 1 0 0
chr1:204132021|204132252 hsa-miR-4642 0 1 0
chr1:204132021|204132252 hsa-miR-4651 1 1 0
chr1:204132021|204132252 hsa-miR-4710 1 0 0
chr1:204132021|204132252 hsa-miR-4752 0 1 0
chr1:204132021|204132252 hsa-miR-5194 1 0 0
chr1:204132021|204132252 hsa-miR-5572 1 0 0
chr1:204132021|204132252 hsa-miR-5698 1 0 0
chr1:204132021|204132252 hsa-miR-5787 1 0 0
chr1:204132021|204132252 hsa-miR-6090 1 0 0
chr1:204132021|204132252 hsa-miR-6127 1 0 0
chr1:204132021|204132252 hsa-miR-6129 1 0 0
chr1:204132021|204132252 hsa-miR-6131 0 1 0
chr1:204132021|204132252 hsa-miR-6133 1 0 0
chr1:204132021|204132252 hsa-miR-8072 1 0 0
chr1:204132021|204132252 hsa-miR-8089 1 0 0
chr1:204132021|204132252 hsa-miR-11399 1 0 0
chr1:204132021|204132252 hsa-miR-211-3p 0 1 0
chr1:204132021|204132252 hsa-miR-4433b-3p 1 0 0
chr1:204132021|204132252 hsa-miR-7155-5p 0 1 0
chr1:204132021|204132252 hsa-miR-6747-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6861-5p 1 0 0
chr1:204132021|204132252 hsa-miR-7106-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6825-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6894-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6892-3p 0 1 0
chr1:204132021|204132252 hsa-miR-219a-1-3p 0 1 0
chr1:204132021|204132252 hsa-miR-6799-5p 1 0 0
chr1:204132021|204132252 hsa-miR-766-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6757-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6880-5p 1 0 0
chr1:204132021|204132252 hsa-miR-7847-3p 1 0 0
chr1:204132021|204132252 hsa-miR-6820-5p 0 1 0
chr1:204132021|204132252 hsa-miR-4474-3p 1 1 0
chr1:204132021|204132252 hsa-miR-6842-3p 0 1 0
chr1:204132021|204132252 hsa-miR-197-5p 1 0 0
chr1:204132021|204132252 hsa-miR-7845-5p 0 1 0
chr1:204132021|204132252 hsa-miR-6742-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6716-5p 1 0 0
chr1:204132021|204132252 hsa-miR-3151-5p 1 0 0
chr1:204132021|204132252 hsa-miR-3180-3p 1 0 0
chr1:204132021|204132252 hsa-miR-6796-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6732-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6805-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6827-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6782-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6786-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6835-5p 1 0 0
chr1:204132021|204132252 hsa-miR-1229-5p 1 1 0
chr1:204132021|204132252 hsa-miR-619-3p 0 1 0
chr1:204132021|204132252 hsa-miR-1908-5p 1 0 0
chr1:204132021|204132252 hsa-miR-7113-3p 0 1 0
chr1:204132021|204132252 hsa-miR-1228-5p 1 0 0
chr1:204132021|204132252 hsa-miR-296-3p 1 0 0
chr1:204132021|204132252 hsa-miR-92b-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6749-5p 1 0 0
chr1:204132021|204132252 hsa-miR-642b-5p 0 1 0
chr1:204132021|204132252 hsa-miR-7111-3p 0 1 0
chr1:204132021|204132252 hsa-miR-4743-5p 1 0 0
chr1:204132021|204132252 hsa-miR-4638-3p 0 1 0
chr1:204132021|204132252 hsa-miR-4446-3p 1 0 0
chr1:204132021|204132252 hsa-miR-149-3p 1 1 0
chr1:204132021|204132252 hsa-miR-6824-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6789-5p 1 0 0
chr1:204132021|204132252 hsa-miR-7156-3p 1 0 0
chr1:204132021|204132252 hsa-miR-5010-5p 1 0 0
chr1:204132021|204132252 hsa-miR-3190-5p 0 1 0
chr1:204132021|204132252 hsa-miR-1225-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6867-3p 0 1 0
chr1:204132021|204132252 hsa-miR-4773 0 1 0
chr1:204132021|204132252 hsa-miR-6826-3p 0 1 0
chr1:204132021|204132252 hsa-miR-5088-3p 0 1 0
chr1:204132021|204132252 hsa-miR-518c-5p 0 1 0
chr1:204132021|204132252 hsa-miR-642a-5p 0 1 0
chr1:204132021|204132252 hsa-miR-552-3p 1 0 0
chr1:204132021|204132252 hsa-miR-10400-5p 1 0 0
chr1:204132021|204132252 hsa-miR-1233-5p 1 0 0
chr1:204132021|204132252 hsa-miR-4763-3p 1 1 0
chr1:204132021|204132252 hsa-miR-6769b-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6778-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6787-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6812-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6816-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6865-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6870-5p 1 0 0
chr1:204132021|204132252 hsa-miR-1343-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6737-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6756-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6769a-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6803-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6819-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6842-5p 1 0 0
chr1:204132021|204132252 hsa-miR-10401-5p 1 0 0
chr1:204132021|204132252 hsa-miR-1249-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6722-3p 1 0 0
chr1:204132021|204132252 hsa-miR-6751-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6779-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6780a-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6797-5p 1 1 0
chr1:204132021|204132252 hsa-miR-6808-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6879-5p 1 0 0
chr1:204132021|204132252 hsa-miR-7111-5p 1 0 0
chr1:204132021|204132252 hsa-miR-320a-5p 0 1 0
chr1:204132021|204132252 hsa-miR-3620-5p 1 0 0
chr1:204132021|204132252 hsa-miR-4728-5p 1 1 0
chr1:204132021|204132252 hsa-miR-5196-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6780b-5p 1 0 0
chr1:204132021|204132252 hsa-miR-10396b-5p 1 0 0
chr1:204132021|204132252 hsa-miR-1237-5p 1 0 0
chr1:204132021|204132252 hsa-miR-328-5p 1 0 0
chr1:204132021|204132252 hsa-miR-4649-5p 1 0 0
chr1:204132021|204132252 hsa-miR-4726-5p 1 0 0
chr1:204132021|204132252 hsa-miR-4745-5p 1 0 0
chr1:204132021|204132252 hsa-miR-4749-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6729-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6738-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6795-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6846-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6848-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6883-5p 1 1 0
chr1:204132021|204132252 hsa-miR-939-5p 1 0 0
chr1:204132021|204132252 hsa-miR-4758-5p 1 0 0
chr1:204132021|204132252 hsa-miR-3940-5p 1 0 0
chr1:204132021|204132252 hsa-miR-7843-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6736-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6855-5p 1 1 0
chr1:204132021|204132252 hsa-miR-4747-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6766-5p 1 0 0
chr1:204132021|204132252 hsa-miR-6785-5p 1 1 0
chr1:204132021|204132252 hsa-miR-4768-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:204132021|204132252
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MFSRAQFCTLGSTPLDRVGEGTHGCPGRRLCPCRQTPVVA
Nucleotide Sequence CTGTTCTCCAGAGCTCAATTCTGCACTCTGGGATCCACACCCTTGGACAGGGTGGGAGAGGGGACACATGGGTGTCCAGGGAGAAGGCTCTGTCCCTGCCGCCAGACCCCAGTGGTTGCC
CircID chr1:204132021|204132252
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MSGQTCSPELNSALWDPHPWTGWERGHMGVQGEGSVPAARPQWLP
Nucleotide Sequence CTGTCTGGCCAGACCTGTTCTCCAGAGCTCAATTCTGCACTCTGGGATCCACACCCTTGGACAGGGTGGGAGAGGGGACACATGGGTGTCCAGGGAGAAGGCTCTGTCCCTGCCGCCAGACCCCAGTGGTTGCCA
CircID chr1:204132021|204132252
ORF Type ORF3
Protein Length 43
Nucleotide Length 129
Protein Sequence MARPVLQSSILHSGIHTLGQGGRGDTWVSREKALSLPPDPSGC
Nucleotide Sequence CTGGCCAGACCTGTTCTCCAGAGCTCAATTCTGCACTCTGGGATCCACACCCTTGGACAGGGTGGGAGAGGGGACACATGGGTGTCCAGGGAGAAGGCTCTGTCCCTGCCGCCAGACCCCAGTGGTTGC
CircID chr1:204132021|204132252
ORF Type ORF4
Protein Length 65
Nucleotide Length 198
Protein Sequence MGSGGRDRAFSLDTHVSPLPPCPRVWIPECRIELWRTGLARQMGRGGMGWLVTLASPRLTLEASP
Nucleotide Sequence CTGGGGTCTGGCGGCAGGGACAGAGCCTTCTCCCTGGACACCCATGTGTCCCCTCTCCCACCCTGTCCAAGGGTGTGGATCCCAGAGTGCAGAATTGAGCTCTGGAGAACAGGTCTGGCCAGACAGATGGGTAGGGGAGGGATGGGGTGGCTGGTCACTTTGGCATCTCCAAGGCTGACGCTTGAGGCTTCACCTTGA
CircID chr1:204132021|204132252
ORF Type ORF5
Protein Length 56
Nucleotide Length 171
Protein Sequence MAAGTEPSPWTPMCPLSHPVQGCGSQSAELSSGEQVWPDRWVGEGWGGWSLWHLQG
Nucleotide Sequence CTGGCGGCAGGGACAGAGCCTTCTCCCTGGACACCCATGTGTCCCCTCTCCCACCCTGTCCAAGGGTGTGGATCCCAGAGTGCAGAATTGAGCTCTGGAGAACAGGTCTGGCCAGACAGATGGGTAGGGGAGGGATGGGGTGGCTGGTCACTTTGGCATCTCCAAGGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab