CircRNA Information

General Information
circRNA Basic Information
CircID chr1:204537578|204537715
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTTCCCTGAATGTGGTAAGAATTTAATAAGAAAGGTTCTTGGGAGTTCACAGACCAGGGACAGAGTGAACCTTCTCTGTTCTGCCCATAACAGAGTTCCAGTCTCTGAACCTTTCTTTGGGATGTAGCACTTCTGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:204537578|204537715 hsa-miR-181c-5p 0 0 1
chr1:204537578|204537715 hsa-miR-181c-3p 0 0 1
chr1:204537578|204537715 hsa-miR-221-5p 0 0 1
chr1:204537578|204537715 hsa-miR-221-3p 0 0 1
chr1:204537578|204537715 hsa-miR-222-5p 0 0 1
chr1:204537578|204537715 hsa-miR-222-3p 0 0 1
chr1:204537578|204537715 hsa-miR-150-5p 0 0 1
chr1:204537578|204537715 hsa-miR-150-3p 0 0 1
chr1:204537578|204537715 hsa-miR-302a-5p 0 0 1
chr1:204537578|204537715 hsa-miR-302a-3p 0 0 1
chr1:204537578|204537715 hsa-miR-302b-5p 0 0 1
chr1:204537578|204537715 hsa-miR-302b-3p 0 0 1
chr1:204537578|204537715 hsa-miR-302c-5p 0 0 1
chr1:204537578|204537715 hsa-miR-302c-3p 0 0 1
chr1:204537578|204537715 hsa-miR-302d-5p 0 0 1
chr1:204537578|204537715 hsa-miR-302d-3p 0 0 1
chr1:204537578|204537715 hsa-miR-372-5p 0 0 1
chr1:204537578|204537715 hsa-miR-372-3p 0 0 1
chr1:204537578|204537715 hsa-miR-373-5p 0 0 1
chr1:204537578|204537715 hsa-miR-373-3p 0 0 1
chr1:204537578|204537715 hsa-miR-181d-5p 0 0 1
chr1:204537578|204537715 hsa-miR-181d-3p 0 0 1
chr1:204537578|204537715 hsa-miR-520e-5p 0 0 1
chr1:204537578|204537715 hsa-miR-520e-3p 0 0 1
chr1:204537578|204537715 hsa-miR-520b-5p 0 0 1
chr1:204537578|204537715 hsa-miR-520b-3p 0 0 1
chr1:204537578|204537715 hsa-miR-302e 0 0 1
chr1:204537578|204537715 hsa-miR-140-3p 0 0 1
chr1:204537578|204537715 hsa-miR-520d-3p 0 0 1
chr1:204537578|204537715 hsa-miR-520a-3p 0 0 1
chr1:204537578|204537715 hsa-miR-520c-3p 0 1 1
chr1:204537578|204537715 hsa-miR-548b-3p 0 0 1
chr1:204537578|204537715 hsa-miR-181a 0 0 1
chr1:204537578|204537715 hsa-miR-181b 0 0 1
chr1:204537578|204537715 hsa-miR-298 1 0 0
chr1:204537578|204537715 hsa-miR-1299 0 1 0
chr1:204537578|204537715 hsa-miR-4476 0 1 0
chr1:204537578|204537715 hsa-miR-4688 1 0 0
chr1:204537578|204537715 hsa-miR-6089 1 0 0
chr1:204537578|204537715 hsa-miR-6730-5p 0 1 0
chr1:204537578|204537715 hsa-miR-3663-5p 0 1 0
chr1:204537578|204537715 hsa-miR-6770-5p 0 1 0
chr1:204537578|204537715 hsa-miR-6794-3p 0 1 0
chr1:204537578|204537715 hsa-miR-2681-5p 0 1 0
chr1:204537578|204537715 hsa-miR-4677-3p 0 1 0
chr1:204537578|204537715 hsa-miR-7107-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:204537578|204537715
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MELCYGQNREGSLCPWSVNSQEPFLLNSYHIQGK
Nucleotide Sequence CTGGAACTCTGTTATGGGCAGAACAGAGAAGGTTCACTCTGTCCCTGGTCTGTGAACTCCCAAGAACCTTTCTTATTAAATTCTTACCACATTCAGGGAAAG

CircID chr1:204537578|204537715
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MLWAEQRRFTLSLVCELPRTFLIKFLPHSGK
Nucleotide Sequence CTGTTATGGGCAGAACAGAGAAGGTTCACTCTGTCCCTGGTCTGTGAACTCCCAAGAACCTTTCTTATTAAATTCTTACCACATTCAGGGAAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites