CircNet

General Information

circRNA Basic Information

CircID	chr1:205161258\|205163955
Strand	-
CircType	exon
Host Gene	ENSG00000133059.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	ACGTCATTGTCCCTGAGAATGGAGAACCAGTAGGCACCAGAGAGATCAAATGCTGCATCCGACAGATCCAGGAACTCATCATCTCCCGACTTAATCAGGCAGTGGCTAATAAGCTGATCAGCTCAGTGGATTACCTGAGGGAAAGCTTCGTCGGAACCCTGGAACGATGTCTGCAGAGCCTGGAGAAGTCTCAGGATGTCTCAGTTCACATCACCAGTAATTATCTCAAACAGATCTTAAATGCTGCCTATCATGTTGAAGTCACGTTTCACTCAGGGTCGTCAGTTACAAGGATGCTATGGGAGCAAATCAAACAGATCATCCAGCGCATCACATGGGTGAGCCCACCTGCCATCACTCTGGAATGGAAGAGGAAGGTGGCCCAGGAAGCCATTGAGAGCCTCAGCGCCTCCAAATTGGCTAAGAGCATTTGCAGCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCAGCTGGAAGCTGGCCACTCAGGCCGGTTAGAGAAAACGGAAGATCTATGGCTGAGGGTTCGGAAAGATCATGCTCCCCGCCTGGCCCGCCTTTCTCTGGAAAGCTGTTCTTTACAGGATGTCTTGCTTCATC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:205161258\|205163955	hsa-miR-661	1	1	1
chr1:205161258\|205163955	hsa-miR-662	1	1	1
chr1:205161258\|205163955	hsa-miR-665	1	1	1
chr1:205161258\|205163955	hsa-miR-663b	1	1	1
chr1:205161258\|205163955	hsa-miR-1270	1	1	1
chr1:205161258\|205163955	hsa-miR-3188	1	1	1
chr1:205161258\|205163955	hsa-miR-4258	1	1	1
chr1:205161258\|205163955	hsa-miR-4533	1	1	1
chr1:205161258\|205163955	hsa-miR-3975	1	1	1
chr1:205161258\|205163955	hsa-miR-3978	1	1	1
chr1:205161258\|205163955	hsa-miR-4660	1	1	1
chr1:205161258\|205163955	hsa-miR-4663	1	1	1
chr1:205161258\|205163955	hsa-miR-6079	1	1	1
chr1:205161258\|205163955	hsa-miR-6125	1	1	1
chr1:205161258\|205163955	hsa-miR-8075	1	1	1
chr1:205161258\|205163955	hsa-miR-6734-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-6747-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-671-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-6807-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-1301-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-7160-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-6820-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-6741-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-3928-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-6842-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-3187-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-1915-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-2467-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-6827-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-2467-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-6765-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-6882-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-6772-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-1226-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-4707-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-4691-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-885-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-296-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-4717-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-4743-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-7156-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-7106-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-1307-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-34a-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-328-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-4649-3p	1	1	1
chr1:205161258\|205163955	hsa-miR-7158-5p	1	1	1
chr1:205161258\|205163955	hsa-miR-580-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:205161258\|205163955
ORF Type	ORF1
Protein Length	174
Nucleotide Length	522
Protein Sequence	VANKLISSVDYLRESFVGTLERCLQSLEKSQDVSVHITSNYLKQILNAAYHVEVTFHSGSSVTRMLWEQIKQIIQRITWVSPPAITLEWKRKVAQEAIESLSASKLAKSICSQFRTRLNSSHEAFAASLRQLEAGHSGRLEKTEDLWLRVRKDHAPRLARLSLESCSLQDVLLH
Nucleotide Sequence	GTGGCTAATAAGCTGATCAGCTCAGTGGATTACCTGAGGGAAAGCTTCGTCGGAACCCTGGAACGATGTCTGCAGAGCCTGGAGAAGTCTCAGGATGTCTCAGTTCACATCACCAGTAATTATCTCAAACAGATCTTAAATGCTGCCTATCATGTTGAAGTCACGTTTCACTCAGGGTCGTCAGTTACAAGGATGCTATGGGAGCAAATCAAACAGATCATCCAGCGCATCACATGGGTGAGCCCACCTGCCATCACTCTGGAATGGAAGAGGAAGGTGGCCCAGGAAGCCATTGAGAGCCTCAGCGCCTCCAAATTGGCTAAGAGCATTTGCAGCCAATTCCGGACTCGGCTCAATAGTTCCCACGAGGCTTTTGCAGCCTCCTTGCGGCAGCTGGAAGCTGGCCACTCAGGCCGGTTAGAGAAAACGGAAGATCTATGGCTGAGGGTTCGGAAAGATCATGCTCCCCGCCTGGCCCGCCTTTCTCTGGAAAGCTGTTCTTTACAGGATGTCTTGCTTCAT

CircID	chr1:205161258\|205163955
ORF Type	ORF2
Protein Length	54
Nucleotide Length	162
Protein Sequence	MLLANLEALRLSMASWATFLFHSRVMAGGLTHVMRWMICLICSHSILVTDDPE*
Nucleotide Sequence	ATGCTCTTAGCCAATTTGGAGGCGCTGAGGCTCTCAATGGCTTCCTGGGCCACCTTCCTCTTCCATTCCAGAGTGATGGCAGGTGGGCTCACCCATGTGATGCGCTGGATGATCTGTTTGATTTGCTCCCATAGCATCCTTGTAACTGACGACCCTGAGTGA

CircID	chr1:205161258\|205163955
ORF Type	ORF3
Protein Length	34
Nucleotide Length	102
Protein Sequence	MLPIMLKSRFTQGRQLQGCYGSKSNRSSSASHG*
Nucleotide Sequence	ATGCTGCCTATCATGTTGAAGTCACGTTTCACTCAGGGTCGTCAGTTACAAGGATGCTATGGGAGCAAATCAAACAGATCATCCAGCGCATCACATGGGTGA

CircID	chr1:205161258\|205163955
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MGANQTDHPAHHMGEPTCHHSGMEEEGGPGSH*
Nucleotide Sequence	ATGGGAGCAAATCAAACAGATCATCCAGCGCATCACATGGGTGAGCCCACCTGCCATCACTCTGGAATGGAAGAGGAAGGTGGCCCAGGAAGCCATTGA

CircID	chr1:205161258\|205163955
ORF Type	ORF5
Protein Length	71
Nucleotide Length	213
Protein Sequence	VASFQLPQGGCKSLVGTIEPSPELAANALSQFGGAEALNGFLGHLPLPFQSDGRWAHPCDALDDLFDLLP*
Nucleotide Sequence	GTGGCCAGCTTCCAGCTGCCGCAAGGAGGCTGCAAAAGCCTCGTGGGAACTATTGAGCCGAGTCCGGAATTGGCTGCAAATGCTCTTAGCCAATTTGGAGGCGCTGAGGCTCTCAATGGCTTCCTGGGCCACCTTCCTCTTCCATTCCAGAGTGATGGCAGGTGGGCTCACCCATGTGATGCGCTGGATGATCTGTTTGATTTGCTCCCATAG

CircID	chr1:205161258\|205163955
ORF Type	ORF6
Protein Length	57
Nucleotide Length	171
Protein Sequence	DEARHPVKNSFPEKGGPGGEHDLSEPSAIDLPFSLTGLSGQLPAAARRLQKPRGNY*
Nucleotide Sequence	GATGAAGCAAGACATCCTGTAAAGAACAGCTTTCCAGAGAAAGGCGGGCCAGGCGGGGAGCATGATCTTTCCGAACCCTCAGCCATAGATCTTCCGTTTTCTCTAACCGGCCTGAGTGGCCAGCTTCCAGCTGCCGCAAGGAGGCTGCAAAAGCCTCGTGGGAACTATTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:205161258\|205163955	ELAVL1	0	0	2
chr1:205161258\|205163955	NUMA1	0	1	0
chr1:205161258\|205163955	CNBP	0	0	1
chr1:205161258\|205163955	FMR1	0	5	10
chr1:205161258\|205163955	SRSF1	0	2	8
chr1:205161258\|205163955	NOP58	0	1	4
chr1:205161258\|205163955	U2AF1	0	0	4
chr1:205161258\|205163955	U2AF2	3	4	3
chr1:205161258\|205163955	SRSF9	0	0	1
chr1:205161258\|205163955	DDX54	0	0	5
chr1:205161258\|205163955	PTBP1	1	1	0
chr1:205161258\|205163955	HNRNPC	0	1	0
chr1:205161258\|205163955	TRA2A	0	0	1
chr1:205161258\|205163955	ZC3H7B	0	0	1
chr1:205161258\|205163955	LIN28B	0	0	2
chr1:205161258\|205163955	RANGAP1	0	0	1
chr1:205161258\|205163955	FXR1	0	0	1
chr1:205161258\|205163955	FXR2	0	1	2
chr1:205161258\|205163955	IGF2BP1	0	0	3
chr1:205161258\|205163955	IGF2BP3	0	0	2
chr1:205161258\|205163955	IGF2BP2	1	0	4
chr1:205161258\|205163955	BUD13	1	1	5
chr1:205161258\|205163955	PRPF8	0	4	0
chr1:205161258\|205163955	CSTF2T	0	0	2
chr1:205161258\|205163955	TIA1	0	1	0
chr1:205161258\|205163955	RBM27	0	1	0
chr1:205161258\|205163955	RBM22	0	0	1
chr1:205161258\|205163955	AGO2	0	0	2
chr1:205161258\|205163955	EWSR1	0	1	0
chr1:205161258\|205163955	EIF4A3	2	2	8
chr1:205161258\|205163955	FBL	2	1	3

CircRNA Information