CircNet

General Information

circRNA Basic Information

CircID	chr1:20650934\|20651116
Strand	+
CircType	exon
Host Gene	ENSG00000158828.5;
Algorism	CIRI2;
Sequence	TCCCGTAACTGAACGTGCTGACCCATGTTGATGTCTGCCTTCATCCAGGTGGCAAATCAGACATGCTACGCTGCCCCCTTCAAACGAGTTCCTCGTGTTAGGGGCAAAGGTCACAGCCAAACTCTGCCACTGACAGCCAGTGCCTTGGCCTGGATCCTCTCTGTGGATGCAGGCCTACCCCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:20650934\|20651116	hsa-miR-223-5p	0	0	1
chr1:20650934\|20651116	hsa-miR-223-3p	0	0	1
chr1:20650934\|20651116	hsa-miR-506-5p	0	0	1
chr1:20650934\|20651116	hsa-miR-506-3p	0	0	1
chr1:20650934\|20651116	hsa-miR-619-5p	0	0	1
chr1:20650934\|20651116	hsa-miR-619-3p	0	0	1
chr1:20650934\|20651116	hsa-miR-647	0	0	1
chr1:20650934\|20651116	hsa-miR-892b	0	0	1
chr1:20650934\|20651116	hsa-miR-935	0	0	1
chr1:20650934\|20651116	hsa-miR-1255a	0	0	1
chr1:20650934\|20651116	hsa-miR-1282	0	0	1
chr1:20650934\|20651116	hsa-miR-486-3p	1	1	1
chr1:20650934\|20651116	hsa-miR-885-3p	0	1	1
chr1:20650934\|20651116	hsa-miR-324-5p	0	0	1
chr1:20650934\|20651116	hsa-miR-654-3p	0	0	1
chr1:20650934\|20651116	hsa-miR-1255b	0	0	1
chr1:20650934\|20651116	hsa-miR-1308	0	0	1
chr1:20650934\|20651116	hsa-miR-124	0	0	1
chr1:20650934\|20651116	hsa-miR-4487	1	0	0
chr1:20650934\|20651116	hsa-miR-4498	1	0	0
chr1:20650934\|20651116	hsa-miR-4651	1	0	0
chr1:20650934\|20651116	hsa-miR-4741	1	0	0
chr1:20650934\|20651116	hsa-miR-7974	1	1	0
chr1:20650934\|20651116	hsa-miR-1972	0	1	0
chr1:20650934\|20651116	hsa-miR-4687-3p	1	0	0
chr1:20650934\|20651116	hsa-miR-3064-5p	1	1	0
chr1:20650934\|20651116	hsa-miR-4697-3p	1	0	0
chr1:20650934\|20651116	hsa-miR-6805-5p	0	1	0
chr1:20650934\|20651116	hsa-miR-4715-3p	0	1	0
chr1:20650934\|20651116	hsa-miR-3614-5p	0	1	0
chr1:20650934\|20651116	hsa-miR-6864-5p	0	1	0
chr1:20650934\|20651116	hsa-miR-616-3p	1	0	0
chr1:20650934\|20651116	hsa-miR-4661-3p	0	1	0
chr1:20650934\|20651116	hsa-miR-6759-3p	0	1	0
chr1:20650934\|20651116	hsa-miR-6808-3p	0	1	0
chr1:20650934\|20651116	hsa-miR-3913-3p	0	1	0
chr1:20650934\|20651116	hsa-miR-758-3p	0	1	0
chr1:20650934\|20651116	hsa-miR-124-3p	0	1	0
chr1:20650934\|20651116	hsa-miR-1207-5p	1	0	0
chr1:20650934\|20651116	hsa-miR-4763-3p	1	0	0
chr1:20650934\|20651116	hsa-miR-6865-5p	1	0	0
chr1:20650934\|20651116	hsa-miR-6743-5p	1	0	0
chr1:20650934\|20651116	hsa-miR-6756-5p	1	0	0
chr1:20650934\|20651116	hsa-miR-6808-5p	1	0	0
chr1:20650934\|20651116	hsa-miR-6780b-5p	1	0	0
chr1:20650934\|20651116	hsa-miR-4632-5p	1	1	0
chr1:20650934\|20651116	hsa-miR-6738-5p	0	1	0
chr1:20650934\|20651116	hsa-miR-1910-3p	0	1	0
chr1:20650934\|20651116	hsa-miR-6511a-5p	0	1	0
chr1:20650934\|20651116	hsa-miR-6856-5p	0	1	0
chr1:20650934\|20651116	hsa-miR-3085-3p	1	1	0
chr1:20650934\|20651116	hsa-miR-323b-5p	1	1	0
chr1:20650934\|20651116	hsa-miR-34c-5p	0	1	0
chr1:20650934\|20651116	hsa-miR-410-5p	1	1	0
chr1:20650934\|20651116	hsa-miR-6820-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:20650934\|20651116
ORF Type	ORF1
Protein Length	53
Nucleotide Length	159
Protein Sequence	MLMSAFIQVANQTCYAAPFKRVPRVRGKGHSQTLPLTASALAWILSVDAGLPL
Nucleotide Sequence	ATGTTGATGTCTGCCTTCATCCAGGTGGCAAATCAGACATGCTACGCTGCCCCCTTCAAACGAGTTCCTCGTGTTAGGGGCAAAGGTCACAGCCAAACTCTGCCACTGACAGCCAGTGCCTTGGCCTGGATCCTCTCTGTGGATGCAGGCCTACCCCTC

CircID	chr1:20650934\|20651116
ORF Type	ORF2
Protein Length	32
Nucleotide Length	99
Protein Sequence	MPSSRWQIRHATLPPSNEFLVLGAKVTAKLCH
Nucleotide Sequence	CTGCCTTCATCCAGGTGGCAAATCAGACATGCTACGCTGCCCCCTTCAAACGAGTTCCTCGTGTTAGGGGCAAAGGTCACAGCCAAACTCTGCCACTGA

CircID	chr1:20650934\|20651116
ORF Type	ORF3
Protein Length	30
Nucleotide Length	93
Protein Sequence	MNVLTHVDVCLHPGGKSDMLRCPLQTSSSC
Nucleotide Sequence	CTGAACGTGCTGACCCATGTTGATGTCTGCCTTCATCCAGGTGGCAAATCAGACATGCTACGCTGCCCCCTTCAAACGAGTTCCTCGTGTTAG

CircID	chr1:20650934\|20651116
ORF Type	ORF4
Protein Length	40
Nucleotide Length	120
Protein Sequence	MAVTFAPNTRNSFEGGSVACLICHLDEGRHQHGSARSVTG
Nucleotide Sequence	TTGGCTGTGACCTTTGCCCCTAACACGAGGAACTCGTTTGAAGGGGGCAGCGTAGCATGTCTGATTTGCCACCTGGATGAAGGCAGACATCAACATGGGTCAGCACGTTCAGTTACGGGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information