CircRNA Information

General Information
circRNA Basic Information
CircID chr1:207814119|207814253
Strand -
CircType exon
Host Gene ENSG00000203709.8;
Algorism CIRI2;
Sequence CACCTCAGCTCCAGAGCCACCAACTCTGTTAACCTCTGCTGGATCCCGGATGGAGAGGCCCCATGCTGCCTCCTGACTCCCAGACCTCAGAAATTCAAAGGTCAAGAAAAAAGTGCCAGATATGCTGGCCCCTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:207814119|207814253 hsa-miR-107 0 0 1
chr1:207814119|207814253 hsa-miR-192-5p 0 0 1
chr1:207814119|207814253 hsa-miR-192-3p 0 0 1
chr1:207814119|207814253 hsa-miR-215-5p 0 0 1
chr1:207814119|207814253 hsa-miR-215-3p 0 0 1
chr1:207814119|207814253 hsa-miR-136-5p 0 0 1
chr1:207814119|207814253 hsa-miR-136-3p 0 0 1
chr1:207814119|207814253 hsa-miR-526b-5p 0 0 1
chr1:207814119|207814253 hsa-miR-526b-3p 0 0 1
chr1:207814119|207814253 hsa-miR-571 1 0 1
chr1:207814119|207814253 hsa-miR-578 0 0 1
chr1:207814119|207814253 hsa-miR-650 1 1 1
chr1:207814119|207814253 hsa-miR-760 0 1 1
chr1:207814119|207814253 hsa-miR-922 0 1 1
chr1:207814119|207814253 hsa-miR-1827 0 0 1
chr1:207814119|207814253 hsa-miR-423-5p 0 0 1
chr1:207814119|207814253 hsa-miR-338-3p 0 0 1
chr1:207814119|207814253 hsa-miR-103 0 0 1
chr1:207814119|207814253 hsa-miR-516b 0 0 1
chr1:207814119|207814253 hsa-miR-638 1 0 0
chr1:207814119|207814253 hsa-miR-762 1 0 0
chr1:207814119|207814253 hsa-miR-4270 1 0 0
chr1:207814119|207814253 hsa-miR-3612 0 1 0
chr1:207814119|207814253 hsa-miR-3937 1 0 0
chr1:207814119|207814253 hsa-miR-4507 1 0 0
chr1:207814119|207814253 hsa-miR-4654 1 0 0
chr1:207814119|207814253 hsa-miR-4688 1 0 0
chr1:207814119|207814253 hsa-miR-8057 0 1 0
chr1:207814119|207814253 hsa-miR-8089 1 0 0
chr1:207814119|207814253 hsa-miR-12119 1 0 0
chr1:207814119|207814253 hsa-miR-128-1-5p 1 0 0
chr1:207814119|207814253 hsa-miR-3192-5p 0 1 0
chr1:207814119|207814253 hsa-miR-4695-5p 1 1 0
chr1:207814119|207814253 hsa-miR-6871-5p 1 0 0
chr1:207814119|207814253 hsa-miR-2467-3p 1 1 0
chr1:207814119|207814253 hsa-miR-4640-5p 1 0 0
chr1:207814119|207814253 hsa-miR-7161-3p 1 0 0
chr1:207814119|207814253 hsa-miR-296-3p 1 0 0
chr1:207814119|207814253 hsa-miR-6771-5p 1 1 0
chr1:207814119|207814253 hsa-miR-6823-5p 1 0 0
chr1:207814119|207814253 hsa-miR-4713-3p 1 1 0
chr1:207814119|207814253 hsa-miR-6847-5p 1 0 0
chr1:207814119|207814253 hsa-miR-937-5p 1 0 0
chr1:207814119|207814253 hsa-miR-3162-5p 1 0 0
chr1:207814119|207814253 hsa-miR-4715-5p 1 0 0
chr1:207814119|207814253 hsa-miR-4649-3p 1 0 0
chr1:207814119|207814253 hsa-miR-3675-5p 0 1 0
chr1:207814119|207814253 hsa-miR-6778-5p 0 1 0
chr1:207814119|207814253 hsa-miR-6803-5p 1 0 0
chr1:207814119|207814253 hsa-miR-6813-5p 1 0 0
chr1:207814119|207814253 hsa-miR-10401-5p 1 0 0
chr1:207814119|207814253 hsa-miR-6751-5p 1 0 0
chr1:207814119|207814253 hsa-miR-6779-5p 1 0 0
chr1:207814119|207814253 hsa-miR-328-5p 1 0 0
chr1:207814119|207814253 hsa-miR-4632-5p 1 0 0
chr1:207814119|207814253 hsa-miR-4745-5p 1 0 0
chr1:207814119|207814253 hsa-miR-6777-5p 1 0 0
chr1:207814119|207814253 hsa-miR-6846-5p 1 0 0
chr1:207814119|207814253 hsa-miR-6848-5p 1 0 0
chr1:207814119|207814253 hsa-miR-6889-5p 1 0 0
chr1:207814119|207814253 hsa-miR-3940-5p 1 0 0
chr1:207814119|207814253 hsa-miR-1914-3p 1 0 0
chr1:207814119|207814253 hsa-miR-4646-5p 1 0 0
chr1:207814119|207814253 hsa-miR-378a-3p 1 0 0
chr1:207814119|207814253 hsa-miR-3184-5p 0 1 0
chr1:207814119|207814253 hsa-miR-6744-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:207814119|207814253
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MLDPGWRGPMLPPDSQTSEIQRSRKKCQICWPL
Nucleotide Sequence CTGCTGGATCCCGGATGGAGAGGCCCCATGCTGCCTCCTGACTCCCAGACCTCAGAAATTCAAAGGTCAAGAAAAAAGTGCCAGATATGCTGGCCCCTC

CircID chr1:207814119|207814253
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MTFEFLRSGSQEAAWGLSIRDPAEVNRVGGSGAEV
Nucleotide Sequence TTGACCTTTGAATTTCTGAGGTCTGGGAGTCAGGAGGCAGCATGGGGCCTCTCCATCCGGGATCCAGCAGAGGTTAACAGAGTTGGTGGCTCTGGAGCTGAGGTG

CircID chr1:207814119|207814253
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MGVRRQHGASPSGIQQRLTELVALELR
Nucleotide Sequence CTGGGAGTCAGGAGGCAGCATGGGGCCTCTCCATCCGGGATCCAGCAGAGGTTAACAGAGTTGGTGGCTCTGGAGCTGAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites