CircRNA Information

General Information
circRNA Basic Information
CircID chr1:21217633|21217812
Strand -
CircType exon
Host Gene ENSG00000117298.13;
Algorism CIRI2;
Sequence CACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGAGGGGAGGCAGAGGGGACACCATGGCTGGGAGAAGCCCGCCTCTATGTGGCAAGGGGACTGCGGCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:21217633|21217812 hsa-miR-150-5p 0 0 1
chr1:21217633|21217812 hsa-miR-150-3p 0 0 1
chr1:21217633|21217812 hsa-miR-376c-5p 0 0 1
chr1:21217633|21217812 hsa-miR-376c-3p 0 0 1
chr1:21217633|21217812 hsa-miR-562 0 0 1
chr1:21217633|21217812 hsa-miR-298 1 1 1
chr1:21217633|21217812 hsa-miR-873-5p 0 0 1
chr1:21217633|21217812 hsa-miR-873-3p 0 0 1
chr1:21217633|21217812 hsa-miR-937-5p 0 0 1
chr1:21217633|21217812 hsa-miR-937-3p 0 0 1
chr1:21217633|21217812 hsa-miR-1205 0 0 1
chr1:21217633|21217812 hsa-miR-1293 0 0 1
chr1:21217633|21217812 hsa-miR-532-3p 0 0 1
chr1:21217633|21217812 hsa-miR-1184 0 0 1
chr1:21217633|21217812 hsa-miR-658 1 0 0
chr1:21217633|21217812 hsa-miR-765 0 1 0
chr1:21217633|21217812 hsa-miR-1976 0 1 0
chr1:21217633|21217812 hsa-miR-4290 0 1 0
chr1:21217633|21217812 hsa-miR-4428 1 1 0
chr1:21217633|21217812 hsa-miR-3972 1 0 0
chr1:21217633|21217812 hsa-miR-4767 1 0 0
chr1:21217633|21217812 hsa-miR-4784 0 1 0
chr1:21217633|21217812 hsa-miR-5193 0 1 0
chr1:21217633|21217812 hsa-miR-6081 1 0 0
chr1:21217633|21217812 hsa-miR-7977 0 1 0
chr1:21217633|21217812 hsa-miR-6749-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6747-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6836-3p 1 1 0
chr1:21217633|21217812 hsa-miR-6892-3p 1 1 0
chr1:21217633|21217812 hsa-miR-218-1-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6510-5p 1 0 0
chr1:21217633|21217812 hsa-miR-6515-5p 0 1 0
chr1:21217633|21217812 hsa-miR-6875-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6849-3p 1 0 0
chr1:21217633|21217812 hsa-miR-6845-3p 0 1 0
chr1:21217633|21217812 hsa-miR-503-5p 1 0 0
chr1:21217633|21217812 hsa-miR-2467-3p 1 1 0
chr1:21217633|21217812 hsa-miR-6728-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6882-3p 1 1 0
chr1:21217633|21217812 hsa-miR-6858-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6815-3p 0 1 0
chr1:21217633|21217812 hsa-miR-4786-3p 0 1 0
chr1:21217633|21217812 hsa-miR-5001-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6847-5p 0 1 0
chr1:21217633|21217812 hsa-miR-7111-3p 1 1 0
chr1:21217633|21217812 hsa-miR-6780a-3p 0 1 0
chr1:21217633|21217812 hsa-miR-4667-3p 0 1 0
chr1:21217633|21217812 hsa-miR-3690 1 0 0
chr1:21217633|21217812 hsa-miR-3158-5p 0 1 0
chr1:21217633|21217812 hsa-miR-6825-3p 1 0 0
chr1:21217633|21217812 hsa-miR-4646-3p 0 1 0
chr1:21217633|21217812 hsa-miR-211-5p 0 1 0
chr1:21217633|21217812 hsa-miR-3678-3p 0 1 0
chr1:21217633|21217812 hsa-miR-7152-3p 0 1 0
chr1:21217633|21217812 hsa-miR-1237-3p 1 1 0
chr1:21217633|21217812 hsa-miR-660-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6887-3p 0 1 0
chr1:21217633|21217812 hsa-miR-1910-5p 0 1 0
chr1:21217633|21217812 hsa-miR-2276-5p 0 1 0
chr1:21217633|21217812 hsa-miR-6826-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6886-3p 1 0 0
chr1:21217633|21217812 hsa-miR-6795-3p 1 0 0
chr1:21217633|21217812 hsa-miR-4750-3p 0 1 0
chr1:21217633|21217812 hsa-miR-4433b-5p 1 0 0
chr1:21217633|21217812 hsa-miR-6734-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6838-3p 0 1 0
chr1:21217633|21217812 hsa-miR-6722-3p 1 0 0
chr1:21217633|21217812 hsa-miR-6805-3p 1 0 0
chr1:21217633|21217812 hsa-miR-4723-3p 1 1 0
chr1:21217633|21217812 hsa-miR-3914 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:21217633|21217812
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MAGRSPPLCGKGTAAGFCFSYFSGSCLLCRATRTAACWDQD
Nucleotide Sequence ATGGCTGGGAGAAGCCCGCCTCTATGTGGCAAGGGGACTGCGGCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGAC

CircID chr1:21217633|21217812
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MGEARLYVARGLRLASASATSRVPVSSAELPGLLRAGTR
Nucleotide Sequence CTGGGAGAAGCCCGCCTCTATGTGGCAAGGGGACTGCGGCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGG

CircID chr1:21217633|21217812
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MWQGDCGWLLLQLLLGFLSPLQSYQDCCVLGPG
Nucleotide Sequence ATGTGGCAAGGGGACTGCGGCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGA

CircID chr1:21217633|21217812
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MVPARSSPGSSAEETGTREVAEAEASRSPLAT
Nucleotide Sequence CTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACATAG

CircID chr1:21217633|21217812
ORF Type ORF5
Protein Length 38
Nucleotide Length 114
Protein Sequence MKQKPAAVPLPHRGGLLPAMVSPLPPLPRPSCLPRGGW
Nucleotide Sequence CTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACATAGAGGCGGGCTTCTCCCAGCCATGGTGTCCCCTCTGCCTCCCCTCCCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites