CircNet

General Information

circRNA Basic Information

CircID	chr1:213230497\|213232255
Strand	+
CircType	exon
Host Gene	ENSG00000136643.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTTTTACTTGTAATGGACACAAGGACAGAACAGACTTTCATTTTAAAAGGTCTAAGGAAAAGCAGTGAATACAGCAGGAACAGAAAGACCATCATCCCCCGCTGTGTGCCCAACATGGTGTGTCTGCATAAGTACATCATCTCTGAGGAGTCAGTATTTCTTGTGCTGCAGCATGCGGAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:213230497\|213232255	hsa-miR-107	0	0	1
chr1:213230497\|213232255	hsa-miR-214-5p	0	0	1
chr1:213230497\|213232255	hsa-miR-214-3p	0	0	1
chr1:213230497\|213232255	hsa-miR-346	0	0	1
chr1:213230497\|213232255	hsa-miR-578	0	1	1
chr1:213230497\|213232255	hsa-miR-581	0	0	1
chr1:213230497\|213232255	hsa-miR-632	0	0	1
chr1:213230497\|213232255	hsa-miR-873-5p	0	0	1
chr1:213230497\|213232255	hsa-miR-873-3p	0	0	1
chr1:213230497\|213232255	hsa-miR-1184	0	0	1
chr1:213230497\|213232255	hsa-miR-103	0	0	1
chr1:213230497\|213232255	hsa-miR-218	0	0	1
chr1:213230497\|213232255	hsa-miR-499-3p	0	0	1
chr1:213230497\|213232255	hsa-miR-662	1	0	0
chr1:213230497\|213232255	hsa-miR-761	0	1	0
chr1:213230497\|213232255	hsa-miR-298	1	0	0
chr1:213230497\|213232255	hsa-miR-3153	1	0	0
chr1:213230497\|213232255	hsa-miR-3193	1	0	0
chr1:213230497\|213232255	hsa-miR-4321	1	0	0
chr1:213230497\|213232255	hsa-miR-4291	0	1	0
chr1:213230497\|213232255	hsa-miR-3650	1	1	0
chr1:213230497\|213232255	hsa-miR-3921	0	1	0
chr1:213230497\|213232255	hsa-miR-4521	0	1	0
chr1:213230497\|213232255	hsa-miR-5698	1	0	0
chr1:213230497\|213232255	hsa-miR-6165	0	1	0
chr1:213230497\|213232255	hsa-miR-12119	1	1	0
chr1:213230497\|213232255	hsa-miR-6749-3p	1	0	0
chr1:213230497\|213232255	hsa-miR-16-1-3p	0	1	0
chr1:213230497\|213232255	hsa-miR-4732-5p	1	0	0
chr1:213230497\|213232255	hsa-let-7i-5p	1	0	0
chr1:213230497\|213232255	hsa-miR-3619-3p	1	1	0
chr1:213230497\|213232255	hsa-miR-6801-5p	1	0	0
chr1:213230497\|213232255	hsa-miR-6768-3p	1	1	0
chr1:213230497\|213232255	hsa-miR-6509-5p	1	0	0
chr1:213230497\|213232255	hsa-miR-6502-3p	0	1	0
chr1:213230497\|213232255	hsa-miR-6777-5p	1	0	0
chr1:213230497\|213232255	hsa-miR-6799-3p	1	0	0
chr1:213230497\|213232255	hsa-miR-6791-5p	1	0	0
chr1:213230497\|213232255	hsa-miR-519b-3p	0	1	0
chr1:213230497\|213232255	hsa-miR-519c-3p	1	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:213230497\|213232255
ORF Type	ORF1
Protein Length	56
Nucleotide Length	168
Protein Sequence	MDTRTEQTFILKGLRKSSEYSRNRKTIIPRCVPNMVCLHKYIISEESVFLVLQHAE
Nucleotide Sequence	ATGGACACAAGGACAGAACAGACTTTCATTTTAAAAGGTCTAAGGAAAAGCAGTGAATACAGCAGGAACAGAAAGACCATCATCCCCCGCTGTGTGCCCAACATGGTGTGTCTGCATAAGTACATCATCTCTGAGGAGTCAGTATTTCTTGTGCTGCAGCATGCGGAA

CircID	chr1:213230497\|213232255
ORF Type	ORF2
Protein Length	46
Nucleotide Length	138
Protein Sequence	MMYLCRHTMLGTQRGMMVFLFLLYSLLFLRPFKMKVCSVLVSITSK
Nucleotide Sequence	ATGATGTACTTATGCAGACACACCATGTTGGGCACACAGCGGGGGATGATGGTCTTTCTGTTCCTGCTGTATTCACTGCTTTTCCTTAGACCTTTTAAAATGAAAGTCTGTTCTGTCCTTGTGTCCATTACAAGTAAA

CircID	chr1:213230497\|213232255
ORF Type	ORF1
Protein Length	25
Nucleotide Length	78
Protein Sequence	MQTHHVGHTAGDDGLSVPAVFTAFP
Nucleotide Sequence	ATGCAGACACACCATGTTGGGCACACAGCGGGGGATGATGGTCTTTCTGTTCCTGCTGTATTCACTGCTTTTCCTTAG

CircID	chr1:213230497\|213232255
ORF Type	ORF2
Protein Length	32
Nucleotide Length	96
Protein Sequence	MMYLCRHTMLGTQRGMMVFLFLLYSLLFLRPK
Nucleotide Sequence	ATGATGTACTTATGCAGACACACCATGTTGGGCACACAGCGGGGGATGATGGTCTTTCTGTTCCTGCTGTATTCACTGCTTTTCCTTAGACCTAAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:213230497\|213232255	ELAVL1	3	1	0
chr1:213230497\|213232255	FUS	3	1	0
chr1:213230497\|213232255	U2AF2	2	1	0
chr1:213230497\|213232255	DDX54	0	0	1
chr1:213230497\|213232255	FMR1	0	0	1
chr1:213230497\|213232255	NOP58	0	1	0
chr1:213230497\|213232255	PTBP1	1	0	0
chr1:213230497\|213232255	EIF4A3	2	1	4
chr1:213230497\|213232255	FBL	0	0	1

CircRNA Information