CircRNA Information

General Information
circRNA Basic Information
CircID chr1:21577833|21578083
Strand -
CircType exon
Host Gene ENSG00000162551.12;
Algorism CIRI2;
Sequence CCACTTCTGGCCTCCAGCCTTTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCCCAGTCTCATCTCCTGACCCTCCCACTCCCATCTCCTTACCTCTGGAACCCCCCAGGCCCTACAATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:21577833|21578083 hsa-miR-10a-5p 0 0 1
chr1:21577833|21578083 hsa-miR-10a-3p 0 0 1
chr1:21577833|21578083 hsa-miR-10b-5p 0 0 1
chr1:21577833|21578083 hsa-miR-10b-3p 0 0 1
chr1:21577833|21578083 hsa-miR-143-5p 0 0 1
chr1:21577833|21578083 hsa-miR-143-3p 0 0 1
chr1:21577833|21578083 hsa-miR-326 0 0 1
chr1:21577833|21578083 hsa-miR-346 0 0 1
chr1:21577833|21578083 hsa-miR-539-5p 0 0 1
chr1:21577833|21578083 hsa-miR-539-3p 0 0 1
chr1:21577833|21578083 hsa-miR-580-5p 0 0 1
chr1:21577833|21578083 hsa-miR-580-3p 0 0 1
chr1:21577833|21578083 hsa-miR-588 0 0 1
chr1:21577833|21578083 hsa-miR-622 0 0 1
chr1:21577833|21578083 hsa-miR-632 0 0 1
chr1:21577833|21578083 hsa-miR-637 1 0 1
chr1:21577833|21578083 hsa-miR-650 0 0 1
chr1:21577833|21578083 hsa-miR-661 0 0 1
chr1:21577833|21578083 hsa-miR-1296-5p 0 0 1
chr1:21577833|21578083 hsa-miR-1296-3p 0 0 1
chr1:21577833|21578083 hsa-miR-1205 0 0 1
chr1:21577833|21578083 hsa-miR-885-3p 1 0 1
chr1:21577833|21578083 hsa-miR-193a-5p 0 0 1
chr1:21577833|21578083 hsa-miR-1184 0 0 1
chr1:21577833|21578083 hsa-miR-525-5p 0 0 1
chr1:21577833|21578083 hsa-miR-654-3p 0 0 1
chr1:21577833|21578083 hsa-miR-520a-5p 0 0 1
chr1:21577833|21578083 hsa-miR-330-5p 0 0 1
chr1:21577833|21578083 hsa-miR-1274b 0 0 1
chr1:21577833|21578083 hsa-miR-1300 0 0 1
chr1:21577833|21578083 hsa-miR-516b 0 0 1
chr1:21577833|21578083 hsa-miR-198 1 0 0
chr1:21577833|21578083 hsa-miR-608 1 0 0
chr1:21577833|21578083 hsa-miR-762 1 0 0
chr1:21577833|21578083 hsa-miR-765 1 0 0
chr1:21577833|21578083 hsa-miR-1182 1 0 0
chr1:21577833|21578083 hsa-miR-1183 1 0 0
chr1:21577833|21578083 hsa-miR-1268a 1 0 0
chr1:21577833|21578083 hsa-miR-2861 1 0 0
chr1:21577833|21578083 hsa-miR-3132 1 0 0
chr1:21577833|21578083 hsa-miR-3141 1 0 0
chr1:21577833|21578083 hsa-miR-3147 1 0 0
chr1:21577833|21578083 hsa-miR-3154 1 0 0
chr1:21577833|21578083 hsa-miR-1268b 1 0 0
chr1:21577833|21578083 hsa-miR-4428 1 0 0
chr1:21577833|21578083 hsa-miR-2392 1 0 0
chr1:21577833|21578083 hsa-miR-4516 1 0 0
chr1:21577833|21578083 hsa-miR-3960 1 0 0
chr1:21577833|21578083 hsa-miR-4651 1 0 0
chr1:21577833|21578083 hsa-miR-4654 1 0 0
chr1:21577833|21578083 hsa-miR-4688 1 0 0
chr1:21577833|21578083 hsa-miR-4689 1 0 0
chr1:21577833|21578083 hsa-miR-4706 1 0 0
chr1:21577833|21578083 hsa-miR-4710 1 0 0
chr1:21577833|21578083 hsa-miR-4739 1 0 0
chr1:21577833|21578083 hsa-miR-4784 1 0 0
chr1:21577833|21578083 hsa-miR-5093 1 0 0
chr1:21577833|21578083 hsa-miR-5194 1 0 0
chr1:21577833|21578083 hsa-miR-5572 1 0 0
chr1:21577833|21578083 hsa-miR-5787 1 0 0
chr1:21577833|21578083 hsa-miR-6085 1 0 0
chr1:21577833|21578083 hsa-miR-6086 1 0 0
chr1:21577833|21578083 hsa-miR-6088 1 0 0
chr1:21577833|21578083 hsa-miR-6090 1 0 0
chr1:21577833|21578083 hsa-miR-6127 1 0 0
chr1:21577833|21578083 hsa-miR-6133 1 0 0
chr1:21577833|21578083 hsa-miR-7974 1 0 0
chr1:21577833|21578083 hsa-miR-8072 1 0 0
chr1:21577833|21578083 hsa-miR-8089 1 0 0
chr1:21577833|21578083 hsa-miR-4433b-3p 1 0 0
chr1:21577833|21578083 hsa-miR-504-3p 1 0 0
chr1:21577833|21578083 hsa-miR-4433a-3p 1 0 0
chr1:21577833|21578083 hsa-miR-125b-1-3p 1 0 0
chr1:21577833|21578083 hsa-miR-7106-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6825-5p 1 0 0
chr1:21577833|21578083 hsa-miR-125a-3p 1 0 0
chr1:21577833|21578083 hsa-miR-6799-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6728-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6515-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6089 1 0 0
chr1:21577833|21578083 hsa-miR-6757-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4695-5p 1 0 0
chr1:21577833|21578083 hsa-miR-3622b-5p 1 0 0
chr1:21577833|21578083 hsa-miR-3187-3p 1 0 0
chr1:21577833|21578083 hsa-miR-197-5p 1 0 0
chr1:21577833|21578083 hsa-miR-7845-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6716-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6871-5p 1 0 0
chr1:21577833|21578083 hsa-miR-3180-3p 1 0 0
chr1:21577833|21578083 hsa-miR-6748-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6793-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6732-5p 1 0 0
chr1:21577833|21578083 hsa-miR-23a-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6760-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6881-5p 1 0 0
chr1:21577833|21578083 hsa-miR-2467-3p 1 0 0
chr1:21577833|21578083 hsa-miR-6782-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6888-5p 1 0 0
chr1:21577833|21578083 hsa-miR-5006-5p 1 0 0
chr1:21577833|21578083 hsa-miR-7109-5p 1 0 0
chr1:21577833|21578083 hsa-miR-1226-5p 1 0 0
chr1:21577833|21578083 hsa-miR-193b-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4640-5p 1 0 0
chr1:21577833|21578083 hsa-miR-1228-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6771-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4713-3p 1 0 0
chr1:21577833|21578083 hsa-miR-6749-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6847-5p 1 0 0
chr1:21577833|21578083 hsa-miR-7854-3p 1 0 0
chr1:21577833|21578083 hsa-miR-3648 1 0 0
chr1:21577833|21578083 hsa-miR-4787-5p 1 0 0
chr1:21577833|21578083 hsa-miR-425-3p 1 0 0
chr1:21577833|21578083 hsa-miR-149-3p 1 0 0
chr1:21577833|21578083 hsa-miR-202-3p 1 0 0
chr1:21577833|21578083 hsa-miR-3162-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6877-5p 1 0 0
chr1:21577833|21578083 hsa-miR-664b-5p 1 0 0
chr1:21577833|21578083 hsa-miR-135b-3p 1 0 0
chr1:21577833|21578083 hsa-miR-423-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4727-3p 1 0 0
chr1:21577833|21578083 hsa-miR-10400-5p 1 0 0
chr1:21577833|21578083 hsa-miR-1207-5p 1 0 0
chr1:21577833|21578083 hsa-miR-1233-5p 1 0 0
chr1:21577833|21578083 hsa-miR-1273h-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4763-3p 1 0 0
chr1:21577833|21578083 hsa-miR-6769b-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6778-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6787-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6816-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6865-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6775-5p 1 0 0
chr1:21577833|21578083 hsa-miR-1343-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6726-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6737-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6743-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6752-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6754-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6756-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6803-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6813-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6819-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6851-5p 1 0 0
chr1:21577833|21578083 hsa-miR-7107-5p 1 0 0
chr1:21577833|21578083 hsa-miR-7110-5p 1 0 0
chr1:21577833|21578083 hsa-miR-10401-5p 1 0 0
chr1:21577833|21578083 hsa-miR-11181-3p 1 0 0
chr1:21577833|21578083 hsa-miR-1249-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6722-3p 1 0 0
chr1:21577833|21578083 hsa-miR-6751-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6763-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6779-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6780a-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6797-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6808-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6879-5p 1 0 0
chr1:21577833|21578083 hsa-miR-7111-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4728-5p 1 0 0
chr1:21577833|21578083 hsa-miR-5196-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6780b-5p 1 0 0
chr1:21577833|21578083 hsa-miR-10396b-5p 1 0 0
chr1:21577833|21578083 hsa-miR-1237-5p 1 0 0
chr1:21577833|21578083 hsa-miR-328-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4632-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4685-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4726-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4745-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4749-5p 1 0 0
chr1:21577833|21578083 hsa-miR-675-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6777-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6795-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6846-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6848-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6858-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6883-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6887-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6889-5p 1 0 0
chr1:21577833|21578083 hsa-miR-939-5p 1 0 0
chr1:21577833|21578083 hsa-miR-1238-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4758-5p 1 0 0
chr1:21577833|21578083 hsa-miR-4769-5p 1 0 0
chr1:21577833|21578083 hsa-miR-1914-3p 1 0 0
chr1:21577833|21578083 hsa-miR-3679-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6891-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6766-5p 1 0 0
chr1:21577833|21578083 hsa-miR-6785-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:21577833|21578083
ORF Type ORF1
Protein Length 72
Nucleotide Length 216
Protein Sequence MPFGQQGRFLLGRQRVQTADILKASYFSSERISPDPEALKPPWNILDLTLPVSSPDPPTPISLPLEPPRPYN
Nucleotide Sequence CTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGAAGCCTCCGTGGAACATTCTGGATCTGACCCTCCCAGTCTCATCTCCTGACCCTCCCACTCCCATCTCCTTACCTCTGGAACCCCCCAGGCCCTACAAT
CircID chr1:21577833|21578083
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MLPPRCPLANRVDFSWAGREYRLQTFSKPLIFLANVFLQTQRP
Nucleotide Sequence TTGCTCCCTCCCCGCTGCCCTTTGGCCAACAGGGTAGATTTCTCTTGGGCAGGCAGAGAGTACAGACTGCAGACATTCTCAAAGCCTCTTATTTTTCTAGCGAACGTATTTCTCCAGACCCAGAGGCCCTGA
CircID chr1:21577833|21578083
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MRLGGSDPECSTEASGPLGLEKYVR
Nucleotide Sequence ATGAGACTGGGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAG
CircID chr1:21577833|21578083
ORF Type ORF4
Protein Length 30
Nucleotide Length 90
Protein Sequence MQSVLSACPREIYPVGQRAAGREQRLEARS
Nucleotide Sequence CTGCAGTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCTGGAGGCCAGAAGT
CircID chr1:21577833|21578083
ORF Type ORF5
Protein Length 28
Nucleotide Length 84
Protein Sequence MYSLPAQEKSTLLAKGQRGGSKGWRPEV
Nucleotide Sequence CTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCTGGAGGCCAGAAGTG
CircID chr1:21577833|21578083
ORF Type ORF6
Protein Length 43
Nucleotide Length 132
Protein Sequence MGGSRGKEMGVGGSGDETGRVRSRMFHGGFRASGSGEIRSLEK
Nucleotide Sequence CTGGGGGGTTCCAGAGGTAAGGAGATGGGAGTGGGAGGGTCAGGAGATGAGACTGGGAGGGTCAGATCCAGAATGTTCCACGGAGGCTTCAGGGCCTCTGGGTCTGGAGAAATACGTTCGCTAGAAAAATAA
CircID chr1:21577833|21578083
ORF Type ORF7
Protein Length 34
Nucleotide Length 102
Protein Sequence MRMSAVCTLCLPKRNLPCWPKGSGEGAKAGGQKW
Nucleotide Sequence TTGAGAATGTCTGCAGTCTGTACTCTCTGCCTGCCCAAGAGAAATCTACCCTGTTGGCCAAAGGGCAGCGGGGAGGGAGCAAAGGCTGGAGGCCAGAAGTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab