CircRNA Information

General Information
circRNA Basic Information
CircID chr1:21824121|21824376
Strand -
CircType exon
Host Gene ENSG00000187942.10;
Algorism CIRI2;
Sequence CGCAGTGCTGTCACCCGGTGCCACTCGCCGTCATTGATGGGGTCCTCAGAGACCAGGCGGGCCTCCCCACTACCCAGCTGGTACCTGCAGTCATCCAGGCCCAAGAAGTATGAGCTGGGGCAGGACCGGGGGGTGGGGTGCTGGGACCAGGGAAGGGAGAGGAAGGGCCAGGTGCCAGGACCTACCTGAAGACAAGGTGCCCGTCTTGAAGCCCGAGGCTGATGAAGTCCTTGCCTTGGCCGGCCTCTCCCACCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:21824121|21824376 hsa-miR-328-5p 0 0 1
chr1:21824121|21824376 hsa-miR-328-3p 0 0 1
chr1:21824121|21824376 hsa-miR-511-5p 0 0 1
chr1:21824121|21824376 hsa-miR-511-3p 0 0 1
chr1:21824121|21824376 hsa-miR-593-5p 0 0 1
chr1:21824121|21824376 hsa-miR-593-3p 0 0 1
chr1:21824121|21824376 hsa-miR-634 1 1 1
chr1:21824121|21824376 hsa-miR-635 0 1 1
chr1:21824121|21824376 hsa-miR-657 0 0 1
chr1:21824121|21824376 hsa-miR-939-5p 0 0 1
chr1:21824121|21824376 hsa-miR-939-3p 0 0 1
chr1:21824121|21824376 hsa-miR-1205 0 0 1
chr1:21824121|21824376 hsa-miR-1291 0 0 1
chr1:21824121|21824376 hsa-miR-1255a 0 0 1
chr1:21824121|21824376 hsa-miR-491-5p 0 1 1
chr1:21824121|21824376 hsa-miR-1224-5p 0 0 1
chr1:21824121|21824376 hsa-miR-483-5p 0 0 1
chr1:21824121|21824376 hsa-miR-1207-3p 0 0 1
chr1:21824121|21824376 hsa-miR-324-3p 0 0 1
chr1:21824121|21824376 hsa-miR-509-3-5p 0 0 1
chr1:21824121|21824376 hsa-miR-509-5p 0 0 1
chr1:21824121|21824376 hsa-miR-542-3p 0 0 1
chr1:21824121|21824376 hsa-miR-1274a 0 0 1
chr1:21824121|21824376 hsa-miR-1255b 0 0 1
chr1:21824121|21824376 hsa-miR-1254 0 0 1
chr1:21824121|21824376 hsa-miR-611 1 0 0
chr1:21824121|21824376 hsa-miR-663a 1 0 0
chr1:21824121|21824376 hsa-miR-1183 0 1 0
chr1:21824121|21824376 hsa-miR-1202 0 1 0
chr1:21824121|21824376 hsa-miR-3142 1 0 0
chr1:21824121|21824376 hsa-miR-3921 0 1 0
chr1:21824121|21824376 hsa-miR-4418 0 1 0
chr1:21824121|21824376 hsa-miR-4651 0 1 0
chr1:21824121|21824376 hsa-miR-5787 0 1 0
chr1:21824121|21824376 hsa-miR-7977 0 1 0
chr1:21824121|21824376 hsa-miR-12115 1 0 0
chr1:21824121|21824376 hsa-miR-12119 0 1 0
chr1:21824121|21824376 hsa-miR-6749-3p 1 0 0
chr1:21824121|21824376 hsa-miR-149-5p 1 0 0
chr1:21824121|21824376 hsa-miR-3150a-3p 0 1 0
chr1:21824121|21824376 hsa-miR-6861-5p 0 1 0
chr1:21824121|21824376 hsa-miR-6892-3p 1 0 0
chr1:21824121|21824376 hsa-miR-6881-3p 1 1 0
chr1:21824121|21824376 hsa-miR-6089 1 1 0
chr1:21824121|21824376 hsa-miR-7110-3p 1 0 0
chr1:21824121|21824376 hsa-miR-6845-3p 1 0 0
chr1:21824121|21824376 hsa-miR-3663-5p 0 1 0
chr1:21824121|21824376 hsa-miR-423-3p 1 0 0
chr1:21824121|21824376 hsa-miR-877-3p 1 1 0
chr1:21824121|21824376 hsa-miR-6765-3p 1 1 0
chr1:21824121|21824376 hsa-miR-6763-3p 0 1 0
chr1:21824121|21824376 hsa-miR-30c-2-3p 0 1 0
chr1:21824121|21824376 hsa-miR-3667-3p 1 1 0
chr1:21824121|21824376 hsa-miR-6749-5p 1 0 0
chr1:21824121|21824376 hsa-miR-6878-3p 1 0 0
chr1:21824121|21824376 hsa-miR-7111-3p 1 1 0
chr1:21824121|21824376 hsa-miR-4640-3p 0 1 0
chr1:21824121|21824376 hsa-miR-6781-5p 0 1 0
chr1:21824121|21824376 hsa-miR-4646-3p 1 0 0
chr1:21824121|21824376 hsa-miR-6804-3p 0 1 0
chr1:21824121|21824376 hsa-miR-4727-3p 0 1 0
chr1:21824121|21824376 hsa-miR-383-3p 0 1 0
chr1:21824121|21824376 hsa-miR-6871-3p 0 1 0
chr1:21824121|21824376 hsa-miR-6826-3p 0 1 0
chr1:21824121|21824376 hsa-miR-6886-3p 1 1 0
chr1:21824121|21824376 hsa-miR-5088-3p 1 0 0
chr1:21824121|21824376 hsa-miR-6738-3p 1 0 0
chr1:21824121|21824376 hsa-miR-4749-3p 1 0 0
chr1:21824121|21824376 hsa-miR-6795-3p 0 1 0
chr1:21824121|21824376 hsa-miR-331-3p 0 1 0
chr1:21824121|21824376 hsa-miR-6851-3p 1 1 0
chr1:21824121|21824376 hsa-miR-6515-3p 1 0 0
chr1:21824121|21824376 hsa-miR-6812-3p 1 0 0
chr1:21824121|21824376 hsa-miR-1249-3p 1 1 0
chr1:21824121|21824376 hsa-miR-6800-3p 1 0 0
chr1:21824121|21824376 hsa-miR-3162-3p 1 0 0
chr1:21824121|21824376 hsa-miR-10400-5p 1 1 0
chr1:21824121|21824376 hsa-miR-1233-5p 0 1 0
chr1:21824121|21824376 hsa-miR-4763-3p 1 0 0
chr1:21824121|21824376 hsa-miR-6778-5p 0 1 0
chr1:21824121|21824376 hsa-miR-6865-5p 1 0 0
chr1:21824121|21824376 hsa-miR-1343-5p 1 0 0
chr1:21824121|21824376 hsa-miR-6737-5p 1 0 0
chr1:21824121|21824376 hsa-miR-6756-5p 1 0 0
chr1:21824121|21824376 hsa-miR-6774-5p 0 1 0
chr1:21824121|21824376 hsa-miR-6779-5p 1 1 0
chr1:21824121|21824376 hsa-miR-4685-3p 1 1 0
chr1:21824121|21824376 hsa-miR-4725-3p 1 0 0
chr1:21824121|21824376 hsa-miR-4745-5p 1 0 0
chr1:21824121|21824376 hsa-miR-6729-5p 1 0 0
chr1:21824121|21824376 hsa-miR-10394-3p 1 0 0
chr1:21824121|21824376 hsa-miR-30c-1-3p 0 1 0
chr1:21824121|21824376 hsa-miR-3116 0 1 0
chr1:21824121|21824376 hsa-miR-6724-5p 1 0 0
chr1:21824121|21824376 hsa-miR-193b-3p 1 0 0
chr1:21824121|21824376 hsa-miR-6756-3p 1 0 0
chr1:21824121|21824376 hsa-miR-5009-5p 0 1 0
chr1:21824121|21824376 hsa-miR-6775-3p 1 0 0
chr1:21824121|21824376 hsa-miR-3059-5p 0 1 0
chr1:21824121|21824376 hsa-miR-4723-3p 1 0 0
chr1:21824121|21824376 hsa-miR-6769b-3p 1 0 0
chr1:21824121|21824376 hsa-miR-10394-5p 0 1 0
chr1:21824121|21824376 hsa-miR-6848-3p 1 1 0
chr1:21824121|21824376 hsa-miR-6824-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:21824121|21824376
ORF Type ORF1
Protein Length 51
Nucleotide Length 156
Protein Sequence MMGSSETRRASPLPSWYLQSSRPKKYELGQDRGVGCWDQGRERKGQVPGPT
Nucleotide Sequence TTGATGGGGTCCTCAGAGACCAGGCGGGCCTCCCCACTACCCAGCTGGTACCTGCAGTCATCCAGGCCCAAGAAGTATGAGCTGGGGCAGGACCGGGGGGTGGGGTGCTGGGACCAGGGAAGGGAGAGGAAGGGCCAGGTGCCAGGACCTACCTGA
CircID chr1:21824121|21824376
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MSWGRTGGWGAGTREGRGRARCQDLPEDKVPVLKPEADEVLALAGLSHL
Nucleotide Sequence ATGAGCTGGGGCAGGACCGGGGGGTGGGGTGCTGGGACCAGGGAAGGGAGAGGAAGGGCCAGGTGCCAGGACCTACCTGAAGACAAGGTGCCCGTCTTGAAGCCCGAGGCTGATGAAGTCCTTGCCTTGGCCGGCCTCTCCCACCTC
CircID chr1:21824121|21824376
ORF Type ORF3
Protein Length 55
Nucleotide Length 168
Protein Sequence MAPGPSSPFPGPSTPPPGPAPAHTSWAWMTAGTSWVVGRPAWSLRTPSMTASGTG
Nucleotide Sequence CTGGCACCTGGCCCTTCCTCTCCCTTCCCTGGTCCCAGCACCCCACCCCCCGGTCCTGCCCCAGCTCATACTTCTTGGGCCTGGATGACTGCAGGTACCAGCTGGGTAGTGGGGAGGCCCGCCTGGTCTCTGAGGACCCCATCAATGACGGCGAGTGGCACCGGGTGA
CircID chr1:21824121|21824376
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MSSGRSWHLALPLPSLVPAPHPPVLPQLILLGPG
Nucleotide Sequence TTGTCTTCAGGTAGGTCCTGGCACCTGGCCCTTCCTCTCCCTTCCCTGGTCCCAGCACCCCACCCCCCGGTCCTGCCCCAGCTCATACTTCTTGGGCCTGGATGA
CircID chr1:21824121|21824376
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MGLDDCRYQLGSGEARLVSEDPINDGEWHRVTAL
Nucleotide Sequence TTGGGCCTGGATGACTGCAGGTACCAGCTGGGTAGTGGGGAGGCCCGCCTGGTCTCTGAGGACCCCATCAATGACGGCGAGTGGCACCGGGTGACAGCACTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab