CircRNA Information

General Information
circRNA Basic Information
CircID chr1:21828068|21828320
Strand +
CircType exon
Host Gene ENSG00000142798.15;
Algorism CIRI2;
Sequence ATGGTGCCACGTGCATGCCCGCTGGCGAGTATGAGTTCCAGTGCCTGTGTCGAGATGGATTCAAAGGTGGGAAAGCCTGCCCAGGGCACCGGAGGGGAGGGGCACAGGTGGTCAGCGACACCTCCAGCCCATGCCCACCCACCCACTCGCCTCTGCCCTGGCCCACAGGAGACCTGTGTGAGCACGAGGAGAACCCCTGCCAGCTCCGTGAACCCTGTCTGCATGGGGGCACCTGCCAGGGCACCCGCTGCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:21828068|21828320 hsa-miR-377-5p 0 0 1
chr1:21828068|21828320 hsa-miR-377-3p 0 0 1
chr1:21828068|21828320 hsa-miR-612 0 1 1
chr1:21828068|21828320 hsa-miR-874-5p 0 0 1
chr1:21828068|21828320 hsa-miR-874-3p 0 0 1
chr1:21828068|21828320 hsa-miR-541-5p 0 0 1
chr1:21828068|21828320 hsa-miR-541-3p 0 0 1
chr1:21828068|21828320 hsa-miR-1178-5p 0 0 1
chr1:21828068|21828320 hsa-miR-1178-3p 0 0 1
chr1:21828068|21828320 hsa-miR-1293 0 0 1
chr1:21828068|21828320 hsa-miR-1324 0 0 1
chr1:21828068|21828320 hsa-miR-885-3p 1 1 1
chr1:21828068|21828320 hsa-miR-767-5p 0 0 1
chr1:21828068|21828320 hsa-miR-146b-3p 0 0 1
chr1:21828068|21828320 hsa-miR-654-5p 0 0 1
chr1:21828068|21828320 hsa-miR-1224-3p 0 1 1
chr1:21828068|21828320 hsa-miR-188-3p 0 0 1
chr1:21828068|21828320 hsa-miR-1207-5p 1 1 1
chr1:21828068|21828320 hsa-miR-342-3p 0 1 1
chr1:21828068|21828320 hsa-miR-1260 0 0 1
chr1:21828068|21828320 hsa-miR-1280 0 0 1
chr1:21828068|21828320 hsa-miR-1285 0 0 1
chr1:21828068|21828320 hsa-miR-886-3p 0 0 1
chr1:21828068|21828320 hsa-miR-637 1 0 0
chr1:21828068|21828320 hsa-miR-638 1 0 0
chr1:21828068|21828320 hsa-miR-658 0 1 0
chr1:21828068|21828320 hsa-miR-762 1 1 0
chr1:21828068|21828320 hsa-miR-764 0 1 0
chr1:21828068|21828320 hsa-miR-1248 1 0 0
chr1:21828068|21828320 hsa-miR-1260a 0 1 0
chr1:21828068|21828320 hsa-miR-1268a 1 0 0
chr1:21828068|21828320 hsa-miR-4296 0 1 0
chr1:21828068|21828320 hsa-miR-4322 0 1 0
chr1:21828068|21828320 hsa-miR-4253 0 1 0
chr1:21828068|21828320 hsa-miR-4268 0 1 0
chr1:21828068|21828320 hsa-miR-4292 0 1 0
chr1:21828068|21828320 hsa-miR-3652 1 1 0
chr1:21828068|21828320 hsa-miR-3907 1 1 0
chr1:21828068|21828320 hsa-miR-3943 1 0 0
chr1:21828068|21828320 hsa-miR-3945 1 0 0
chr1:21828068|21828320 hsa-miR-1268b 1 0 0
chr1:21828068|21828320 hsa-miR-4481 1 1 0
chr1:21828068|21828320 hsa-miR-4498 1 1 0
chr1:21828068|21828320 hsa-miR-4507 1 0 0
chr1:21828068|21828320 hsa-miR-1587 0 1 0
chr1:21828068|21828320 hsa-miR-4651 1 0 0
chr1:21828068|21828320 hsa-miR-4656 1 0 0
chr1:21828068|21828320 hsa-miR-4673 1 0 0
chr1:21828068|21828320 hsa-miR-4754 1 1 0
chr1:21828068|21828320 hsa-miR-5090 1 0 0
chr1:21828068|21828320 hsa-miR-6860 0 1 0
chr1:21828068|21828320 hsa-miR-7150 0 1 0
chr1:21828068|21828320 hsa-miR-134-3p 0 1 0
chr1:21828068|21828320 hsa-miR-135a-3p 1 0 0
chr1:21828068|21828320 hsa-miR-6089 1 0 0
chr1:21828068|21828320 hsa-miR-6741-5p 0 1 0
chr1:21828068|21828320 hsa-miR-3622b-5p 1 1 0
chr1:21828068|21828320 hsa-miR-6759-5p 1 1 0
chr1:21828068|21828320 hsa-miR-6721-5p 1 1 0
chr1:21828068|21828320 hsa-miR-197-5p 1 0 0
chr1:21828068|21828320 hsa-miR-3189-5p 1 0 0
chr1:21828068|21828320 hsa-miR-4728-3p 1 0 0
chr1:21828068|21828320 hsa-miR-6845-3p 0 1 0
chr1:21828068|21828320 hsa-miR-6768-5p 0 1 0
chr1:21828068|21828320 hsa-miR-6748-5p 1 1 0
chr1:21828068|21828320 hsa-miR-6793-5p 1 0 0
chr1:21828068|21828320 hsa-miR-185-3p 1 0 0
chr1:21828068|21828320 hsa-miR-6732-5p 1 0 0
chr1:21828068|21828320 hsa-miR-23a-5p 1 0 0
chr1:21828068|21828320 hsa-miR-2467-3p 0 1 0
chr1:21828068|21828320 hsa-miR-6810-5p 1 0 0
chr1:21828068|21828320 hsa-miR-5006-5p 1 1 0
chr1:21828068|21828320 hsa-miR-5088-5p 1 0 0
chr1:21828068|21828320 hsa-miR-1226-5p 1 0 0
chr1:21828068|21828320 hsa-miR-1229-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6784-5p 1 0 0
chr1:21828068|21828320 hsa-miR-4640-5p 1 1 0
chr1:21828068|21828320 hsa-miR-6753-5p 1 1 0
chr1:21828068|21828320 hsa-miR-1228-5p 1 0 0
chr1:21828068|21828320 hsa-miR-296-3p 1 0 0
chr1:21828068|21828320 hsa-miR-6823-5p 1 1 0
chr1:21828068|21828320 hsa-miR-3677-3p 1 0 0
chr1:21828068|21828320 hsa-miR-4787-5p 1 0 0
chr1:21828068|21828320 hsa-miR-2681-3p 1 0 0
chr1:21828068|21828320 hsa-miR-4446-3p 1 0 0
chr1:21828068|21828320 hsa-miR-6776-3p 0 1 0
chr1:21828068|21828320 hsa-miR-6781-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6825-3p 0 1 0
chr1:21828068|21828320 hsa-miR-664b-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6811-3p 0 1 0
chr1:21828068|21828320 hsa-miR-6889-3p 0 1 0
chr1:21828068|21828320 hsa-miR-6887-3p 0 1 0
chr1:21828068|21828320 hsa-miR-597-3p 0 1 0
chr1:21828068|21828320 hsa-miR-6782-3p 0 1 0
chr1:21828068|21828320 hsa-miR-7151-5p 1 1 0
chr1:21828068|21828320 hsa-miR-6826-3p 0 1 0
chr1:21828068|21828320 hsa-miR-1914-5p 0 1 0
chr1:21828068|21828320 hsa-miR-4749-3p 0 1 0
chr1:21828068|21828320 hsa-miR-2277-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6767-5p 1 1 0
chr1:21828068|21828320 hsa-miR-18a-5p 0 1 0
chr1:21828068|21828320 hsa-miR-4524b-3p 0 1 0
chr1:21828068|21828320 hsa-miR-10400-5p 1 1 0
chr1:21828068|21828320 hsa-miR-1233-5p 1 0 0
chr1:21828068|21828320 hsa-miR-4763-3p 1 1 0
chr1:21828068|21828320 hsa-miR-6769b-5p 1 1 0
chr1:21828068|21828320 hsa-miR-6787-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6816-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6893-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6775-5p 1 1 0
chr1:21828068|21828320 hsa-miR-5001-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6726-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6743-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6756-5p 1 1 0
chr1:21828068|21828320 hsa-miR-6769a-5p 1 1 0
chr1:21828068|21828320 hsa-miR-6803-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6813-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6851-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6722-3p 1 1 0
chr1:21828068|21828320 hsa-miR-6751-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6779-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6808-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6879-5p 1 1 0
chr1:21828068|21828320 hsa-miR-4685-3p 0 1 0
chr1:21828068|21828320 hsa-miR-3620-5p 1 1 0
chr1:21828068|21828320 hsa-miR-5189-5p 0 1 0
chr1:21828068|21828320 hsa-miR-5196-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6862-5p 0 1 0
chr1:21828068|21828320 hsa-miR-10396b-5p 1 0 0
chr1:21828068|21828320 hsa-miR-1909-3p 1 1 0
chr1:21828068|21828320 hsa-miR-328-5p 1 0 0
chr1:21828068|21828320 hsa-miR-449c-5p 1 0 0
chr1:21828068|21828320 hsa-miR-4632-5p 1 1 0
chr1:21828068|21828320 hsa-miR-4649-5p 1 1 0
chr1:21828068|21828320 hsa-miR-4685-5p 1 1 0
chr1:21828068|21828320 hsa-miR-4701-3p 1 0 0
chr1:21828068|21828320 hsa-miR-4726-5p 1 1 0
chr1:21828068|21828320 hsa-miR-4745-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6729-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6735-5p 0 1 0
chr1:21828068|21828320 hsa-miR-6846-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6883-5p 1 0 0
chr1:21828068|21828320 hsa-miR-4436b-3p 0 1 0
chr1:21828068|21828320 hsa-miR-6845-5p 1 1 0
chr1:21828068|21828320 hsa-miR-939-5p 1 0 0
chr1:21828068|21828320 hsa-miR-4758-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6511b-5p 1 0 0
chr1:21828068|21828320 hsa-miR-7843-5p 0 1 0
chr1:21828068|21828320 hsa-miR-6785-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6724-5p 1 0 0
chr1:21828068|21828320 hsa-miR-6837-5p 0 1 0
chr1:21828068|21828320 hsa-miR-6529-3p 0 1 0
chr1:21828068|21828320 hsa-miR-6737-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:21828068|21828320
ORF Type ORF1
Protein Length 84
Nucleotide Length 252
Protein Sequence MVPRACPLASMSSSACVEMDSKVGKPAQGTGGEGHRWSATPPAHAHPPTRLCPGPQETCVSTRRTPASSVNPVCMGAPARAPAA
Nucleotide Sequence ATGGTGCCACGTGCATGCCCGCTGGCGAGTATGAGTTCCAGTGCCTGTGTCGAGATGGATTCAAAGGTGGGAAAGCCTGCCCAGGGCACCGGAGGGGAGGGGCACAGGTGGTCAGCGACACCTCCAGCCCATGCCCACCCACCCACTCGCCTCTGCCCTGGCCCACAGGAGACCTGTGTGAGCACGAGGAGAACCCCTGCCAGCTCCGTGAACCCTGTCTGCATGGGGGCACCTGCCAGGGCACCCGCTGCC
CircID chr1:21828068|21828320
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MPRAPEGRGTGGQRHLQPMPTHPLASALAHRRPV
Nucleotide Sequence CTGCCCAGGGCACCGGAGGGGAGGGGCACAGGTGGTCAGCGACACCTCCAGCCCATGCCCACCCACCCACTCGCCTCTGCCCTGGCCCACAGGAGACCTGTGTGA
CircID chr1:21828068|21828320
ORF Type ORF3
Protein Length 79
Nucleotide Length 237
Protein Sequence MPAGEYEFQCLCRDGFKGGKACPGHRRGGAQVVSDTSSPCPPTHSPLPWPTGDLCEHEENPCQLREPCLHGGTCQGTRC
Nucleotide Sequence ATGCCCGCTGGCGAGTATGAGTTCCAGTGCCTGTGTCGAGATGGATTCAAAGGTGGGAAAGCCTGCCCAGGGCACCGGAGGGGAGGGGCACAGGTGGTCAGCGACACCTCCAGCCCATGCCCACCCACCCACTCGCCTCTGCCCTGGCCCACAGGAGACCTGTGTGAGCACGAGGAGAACCCCTGCCAGCTCCGTGAACCCTGTCTGCATGGGGGCACCTGCCAGGGCACCCGCTGC
CircID chr1:21828068|21828320
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MEVSLTTCAPPLRCPGQAFPPLNPSRHRHWNSYSPAGMHVAP
Nucleotide Sequence CTGGAGGTGTCGCTGACCACCTGTGCCCCTCCCCTCCGGTGCCCTGGGCAGGCTTTCCCACCTTTGAATCCATCTCGACACAGGCACTGGAACTCATACTCGCCAGCGGGCATGCACGTGGCACCA
CircID chr1:21828068|21828320
ORF Type ORF5
Protein Length 79
Nucleotide Length 237
Protein Sequence MAGAPMQTGFTELAGVLLVLTQVSCGPGQRRVGGWAWAGGVADHLCPSPPVPWAGFPTFESISTQALELILASGHARGT
Nucleotide Sequence CTGGCAGGTGCCCCCATGCAGACAGGGTTCACGGAGCTGGCAGGGGTTCTCCTCGTGCTCACACAGGTCTCCTGTGGGCCAGGGCAGAGGCGAGTGGGTGGGTGGGCATGGGCTGGAGGTGTCGCTGACCACCTGTGCCCCTCCCCTCCGGTGCCCTGGGCAGGCTTTCCCACCTTTGAATCCATCTCGACACAGGCACTGGAACTCATACTCGCCAGCGGGCATGCACGTGGCACC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab