CircRNA Information

General Information
circRNA Basic Information
CircID chr1:21831275|21831523
Strand +
CircType exon
Host Gene ENSG00000142798.15;
Algorism CIRI2;
Sequence CTGGGTGGCTATCCTGACTATGGTGCCATCCCCAAGGCGGGGCTGAGCAGCGGCTTCATAGGTGAGCCCCCTCCCCACCTCCAGCTGAGGCTGGGCCTTACCTGGCTGGCTGGAAGAGCCCTGGAGAGCCTGGGAGGGCACCTCAGGGTATGGGCTGGGACACCCTGCCCTGTGCTCATCCTGCCCACTCACCTCCCAGGCTGTGTCCGGGAGCTGCGCATCCAGGGCGAGGAGATCGTCTTCCATGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:21831275|21831523 hsa-miR-10a-5p 0 0 1
chr1:21831275|21831523 hsa-miR-10a-3p 0 0 1
chr1:21831275|21831523 hsa-miR-10b-5p 0 0 1
chr1:21831275|21831523 hsa-miR-10b-3p 0 0 1
chr1:21831275|21831523 hsa-miR-183-5p 0 0 1
chr1:21831275|21831523 hsa-miR-183-3p 0 0 1
chr1:21831275|21831523 hsa-miR-484 0 0 1
chr1:21831275|21831523 hsa-miR-661 0 0 1
chr1:21831275|21831523 hsa-miR-766-5p 0 0 1
chr1:21831275|21831523 hsa-miR-766-3p 0 0 1
chr1:21831275|21831523 hsa-miR-939-5p 0 0 1
chr1:21831275|21831523 hsa-miR-939-3p 0 0 1
chr1:21831275|21831523 hsa-miR-1236-5p 0 0 1
chr1:21831275|21831523 hsa-miR-1236-3p 0 0 1
chr1:21831275|21831523 hsa-miR-1249-5p 0 0 1
chr1:21831275|21831523 hsa-miR-1249-3p 0 0 1
chr1:21831275|21831523 hsa-miR-1255a 0 1 1
chr1:21831275|21831523 hsa-miR-491-5p 0 0 1
chr1:21831275|21831523 hsa-miR-767-5p 0 1 1
chr1:21831275|21831523 hsa-miR-490-5p 0 0 1
chr1:21831275|21831523 hsa-miR-1207-3p 0 0 1
chr1:21831275|21831523 hsa-miR-767-3p 0 1 1
chr1:21831275|21831523 hsa-miR-1207-5p 0 0 1
chr1:21831275|21831523 hsa-miR-125a-5p 0 0 1
chr1:21831275|21831523 hsa-miR-125b 0 0 1
chr1:21831275|21831523 hsa-miR-1255b 0 0 1
chr1:21831275|21831523 hsa-miR-220c 0 0 1
chr1:21831275|21831523 hsa-miR-7 0 0 1
chr1:21831275|21831523 hsa-miR-608 1 0 0
chr1:21831275|21831523 hsa-miR-638 1 0 0
chr1:21831275|21831523 hsa-miR-3155a 0 1 0
chr1:21831275|21831523 hsa-miR-1268b 1 0 0
chr1:21831275|21831523 hsa-miR-3135b 0 1 0
chr1:21831275|21831523 hsa-miR-3689c 0 1 0
chr1:21831275|21831523 hsa-miR-3155b 0 1 0
chr1:21831275|21831523 hsa-miR-4481 0 1 0
chr1:21831275|21831523 hsa-miR-4533 1 0 0
chr1:21831275|21831523 hsa-miR-4651 1 0 0
chr1:21831275|21831523 hsa-miR-4706 1 0 0
chr1:21831275|21831523 hsa-miR-7977 0 1 0
chr1:21831275|21831523 hsa-miR-6825-5p 0 1 0
chr1:21831275|21831523 hsa-miR-6857-5p 0 1 0
chr1:21831275|21831523 hsa-miR-6720-5p 0 1 0
chr1:21831275|21831523 hsa-miR-6799-5p 0 1 0
chr1:21831275|21831523 hsa-miR-3192-5p 0 1 0
chr1:21831275|21831523 hsa-miR-593-5p 0 1 0
chr1:21831275|21831523 hsa-miR-24-3p 0 1 0
chr1:21831275|21831523 hsa-miR-6721-5p 0 1 0
chr1:21831275|21831523 hsa-miR-6742-5p 1 0 0
chr1:21831275|21831523 hsa-miR-6748-5p 0 1 0
chr1:21831275|21831523 hsa-miR-6732-5p 1 0 0
chr1:21831275|21831523 hsa-miR-6805-5p 1 1 0
chr1:21831275|21831523 hsa-miR-6782-5p 1 0 0
chr1:21831275|21831523 hsa-miR-3194-5p 1 1 0
chr1:21831275|21831523 hsa-miR-30b-3p 0 1 0
chr1:21831275|21831523 hsa-miR-6786-5p 1 0 0
chr1:21831275|21831523 hsa-miR-542-5p 0 1 0
chr1:21831275|21831523 hsa-miR-7854-3p 0 1 0
chr1:21831275|21831523 hsa-miR-4787-5p 1 0 0
chr1:21831275|21831523 hsa-miR-6802-5p 1 0 0
chr1:21831275|21831523 hsa-miR-7843-3p 0 1 0
chr1:21831275|21831523 hsa-miR-4433b-5p 0 1 0
chr1:21831275|21831523 hsa-miR-1273h-5p 0 1 0
chr1:21831275|21831523 hsa-miR-3689b-3p 0 1 0
chr1:21831275|21831523 hsa-miR-4763-3p 1 1 0
chr1:21831275|21831523 hsa-miR-6769b-5p 1 1 0
chr1:21831275|21831523 hsa-miR-6816-5p 1 0 0
chr1:21831275|21831523 hsa-miR-1343-5p 1 0 0
chr1:21831275|21831523 hsa-miR-6752-5p 1 1 0
chr1:21831275|21831523 hsa-miR-6756-5p 1 0 0
chr1:21831275|21831523 hsa-miR-6803-5p 1 1 0
chr1:21831275|21831523 hsa-miR-6851-5p 1 1 0
chr1:21831275|21831523 hsa-miR-7110-5p 0 1 0
chr1:21831275|21831523 hsa-miR-6779-5p 0 1 0
chr1:21831275|21831523 hsa-miR-6780a-5p 0 1 0
chr1:21831275|21831523 hsa-miR-6879-5p 0 1 0
chr1:21831275|21831523 hsa-miR-4728-5p 1 1 0
chr1:21831275|21831523 hsa-miR-5189-5p 1 0 0
chr1:21831275|21831523 hsa-miR-1237-5p 1 0 0
chr1:21831275|21831523 hsa-miR-328-5p 1 0 0
chr1:21831275|21831523 hsa-miR-3689a-3p 0 1 0
chr1:21831275|21831523 hsa-miR-4632-5p 0 1 0
chr1:21831275|21831523 hsa-miR-4685-5p 0 1 0
chr1:21831275|21831523 hsa-miR-4725-3p 1 0 0
chr1:21831275|21831523 hsa-miR-6735-5p 0 1 0
chr1:21831275|21831523 hsa-miR-675-5p 1 0 0
chr1:21831275|21831523 hsa-miR-6885-5p 1 0 0
chr1:21831275|21831523 hsa-miR-4758-5p 0 1 0
chr1:21831275|21831523 hsa-miR-3689d 0 1 0
chr1:21831275|21831523 hsa-miR-10392-3p 1 1 0
chr1:21831275|21831523 hsa-miR-4690-3p 0 1 0
chr1:21831275|21831523 hsa-miR-1255b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:21831275|21831523
ORF Type ORF1
Protein Length 83
Nucleotide Length 249
Protein Sequence LGGYPDYGAIPKAGLSSGFIGEPPPHLQLRLGLTWLAGRALESLGGHLRVWAGTPCPVLILPTHLPGCVRELRIQGEEIVFHD
Nucleotide Sequence CTGGGTGGCTATCCTGACTATGGTGCCATCCCCAAGGCGGGGCTGAGCAGCGGCTTCATAGGTGAGCCCCCTCCCCACCTCCAGCTGAGGCTGGGCCTTACCTGGCTGGCTGGAAGAGCCCTGGAGAGCCTGGGAGGGCACCTCAGGGTATGGGCTGGGACACCCTGCCCTGTGCTCATCCTGCCCACTCACCTCCCAGGCTGTGTCCGGGAGCTGCGCATCCAGGGCGAGGAGATCGTCTTCCATGAC
CircID chr1:21831275|21831523
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MEEPWRAWEGTSGYGLGHPALCSSCPLTSQAVSGSCASRARRSSSM
Nucleotide Sequence CTGGAAGAGCCCTGGAGAGCCTGGGAGGGCACCTCAGGGTATGGGCTGGGACACCCTGCCCTGTGCTCATCCTGCCCACTCACCTCCCAGGCTGTGTCCGGGAGCTGCGCATCCAGGGCGAGGAGATCGTCTTCCATG
CircID chr1:21831275|21831523
ORF Type ORF3
Protein Length 48
Nucleotide Length 147
Protein Sequence MAGWKSPGEPGRAPQGMGWDTLPCAHPAHSPPRLCPGAAHPGRGDRLP
Nucleotide Sequence CTGGCTGGCTGGAAGAGCCCTGGAGAGCCTGGGAGGGCACCTCAGGGTATGGGCTGGGACACCCTGCCCTGTGCTCATCCTGCCCACTCACCTCCCAGGCTGTGTCCGGGAGCTGCGCATCCAGGGCGAGGAGATCGTCTTCCATGA
CircID chr1:21831275|21831523
ORF Type ORF4
Protein Length 82
Nucleotide Length 246
Protein Sequence MEDDLLALDAQLPDTAWEVSGQDEHRAGCPSPYPEVPSQALQGSSSQPGKAQPQLEVGRGLTYEAAAQPRLGDGTIVRIATQ
Nucleotide Sequence ATGGAAGACGATCTCCTCGCCCTGGATGCGCAGCTCCCGGACACAGCCTGGGAGGTGAGTGGGCAGGATGAGCACAGGGCAGGGTGTCCCAGCCCATACCCTGAGGTGCCCTCCCAGGCTCTCCAGGGCTCTTCCAGCCAGCCAGGTAAGGCCCAGCCTCAGCTGGAGGTGGGGAGGGGGCTCACCTATGAAGCCGCTGCTCAGCCCCGCCTTGGGGATGGCACCATAGTCAGGATAGCCACCCAG
CircID chr1:21831275|21831523
ORF Type ORF5
Protein Length 53
Nucleotide Length 162
Protein Sequence MSTGQGVPAHTLRCPPRLSRALPASQVRPSLSWRWGGGSPMKPLLSPALGMAP
Nucleotide Sequence ATGAGCACAGGGCAGGGTGTCCCAGCCCATACCCTGAGGTGCCCTCCCAGGCTCTCCAGGGCTCTTCCAGCCAGCCAGGTAAGGCCCAGCCTCAGCTGGAGGTGGGGAGGGGGCTCACCTATGAAGCCGCTGCTCAGCCCCGCCTTGGGGATGGCACCATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab