CircRNA Information

General Information
circRNA Basic Information
CircID chr1:219968786|219969089
Strand +
CircType exon
Host Gene ENSG00000136628.16;
Algorism CIRI2;
Sequence TGTGAGGACTGGATCAAAAAGACCACTGCCAGGTAAACCTAATTAACTGGCAAAACTTTTGAAAAATTGCAATGGAAAGGAATAGCAATTTGCAGCATAAATGAGTGGAATTCTTATTTGTTATTAATTTCAGGGATCAAGATCTTGAACCTGGTGCTCCATCCATGGGAGCTAAAAGCCTTTGCATCCCCTTCAAACCACTCTGTGAACTGCAGCCTGGAGCCAAATGTGTCTGTGGCAAGAACCCTGCCAAGTACTACACCTTATTTGGTCGCAGCTACTGAGGGATGAACGAAAGCCCCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:219968786|219969089 hsa-miR-18a-5p 0 0 1
chr1:219968786|219969089 hsa-miR-18a-3p 0 0 1
chr1:219968786|219969089 hsa-miR-22-5p 0 0 1
chr1:219968786|219969089 hsa-miR-22-3p 0 0 1
chr1:219968786|219969089 hsa-miR-27a-5p 0 0 1
chr1:219968786|219969089 hsa-miR-27a-3p 0 0 1
chr1:219968786|219969089 hsa-miR-29a-5p 0 0 1
chr1:219968786|219969089 hsa-miR-29a-3p 0 0 1
chr1:219968786|219969089 hsa-miR-34a-5p 0 0 1
chr1:219968786|219969089 hsa-miR-34a-3p 0 0 1
chr1:219968786|219969089 hsa-miR-27b-5p 0 0 1
chr1:219968786|219969089 hsa-miR-27b-3p 0 0 1
chr1:219968786|219969089 hsa-miR-29c-5p 0 0 1
chr1:219968786|219969089 hsa-miR-29c-3p 0 0 1
chr1:219968786|219969089 hsa-miR-18b-5p 0 0 1
chr1:219968786|219969089 hsa-miR-18b-3p 0 0 1
chr1:219968786|219969089 hsa-miR-449a 0 0 1
chr1:219968786|219969089 hsa-miR-495-5p 0 0 1
chr1:219968786|219969089 hsa-miR-495-3p 0 0 1
chr1:219968786|219969089 hsa-miR-527 0 0 1
chr1:219968786|219969089 hsa-miR-561-5p 0 0 1
chr1:219968786|219969089 hsa-miR-561-3p 0 0 1
chr1:219968786|219969089 hsa-miR-587 0 0 1
chr1:219968786|219969089 hsa-miR-607 0 0 1
chr1:219968786|219969089 hsa-miR-619-5p 0 0 1
chr1:219968786|219969089 hsa-miR-619-3p 0 0 1
chr1:219968786|219969089 hsa-miR-640 0 0 1
chr1:219968786|219969089 hsa-miR-449b-5p 0 0 1
chr1:219968786|219969089 hsa-miR-449b-3p 0 0 1
chr1:219968786|219969089 hsa-miR-890 0 0 1
chr1:219968786|219969089 hsa-miR-936 0 0 1
chr1:219968786|219969089 hsa-miR-1202 0 0 1
chr1:219968786|219969089 hsa-miR-1305 0 0 1
chr1:219968786|219969089 hsa-miR-302f 0 0 1
chr1:219968786|219969089 hsa-miR-1278 0 0 1
chr1:219968786|219969089 hsa-miR-140-5p 0 0 1
chr1:219968786|219969089 hsa-miR-490-5p 0 0 1
chr1:219968786|219969089 hsa-miR-513a-5p 0 0 1
chr1:219968786|219969089 hsa-miR-199b-3p 0 0 1
chr1:219968786|219969089 hsa-miR-199a-3p 0 0 1
chr1:219968786|219969089 hsa-miR-299-5p 0 0 1
chr1:219968786|219969089 hsa-miR-1207-5p 0 0 1
chr1:219968786|219969089 hsa-miR-125a-5p 0 0 1
chr1:219968786|219969089 hsa-miR-34c-5p 0 0 1
chr1:219968786|219969089 hsa-miR-518a-5p 0 0 1
chr1:219968786|219969089 hsa-miR-491-3p 0 0 1
chr1:219968786|219969089 hsa-miR-125b 0 0 1
chr1:219968786|219969089 hsa-miR-1826 0 0 1
chr1:219968786|219969089 hsa-miR-29b 0 0 1
chr1:219968786|219969089 hsa-miR-663a 1 0 0
chr1:219968786|219969089 hsa-miR-3154 1 0 0
chr1:219968786|219969089 hsa-miR-4430 1 0 0
chr1:219968786|219969089 hsa-miR-4488 1 0 0
chr1:219968786|219969089 hsa-miR-3960 1 0 0
chr1:219968786|219969089 hsa-miR-4734 1 0 0
chr1:219968786|219969089 hsa-miR-5194 1 0 0
chr1:219968786|219969089 hsa-miR-5787 1 0 0
chr1:219968786|219969089 hsa-miR-12131 1 0 0
chr1:219968786|219969089 hsa-miR-6734-5p 1 0 0
chr1:219968786|219969089 hsa-miR-6861-5p 1 0 0
chr1:219968786|219969089 hsa-miR-4687-3p 1 0 0
chr1:219968786|219969089 hsa-miR-6732-5p 1 0 0
chr1:219968786|219969089 hsa-miR-6798-5p 1 0 0
chr1:219968786|219969089 hsa-miR-4787-5p 1 0 0
chr1:219968786|219969089 hsa-miR-3162-5p 1 0 0
chr1:219968786|219969089 hsa-miR-4763-3p 1 0 0
chr1:219968786|219969089 hsa-miR-6787-5p 1 0 0
chr1:219968786|219969089 hsa-miR-6752-5p 1 0 0
chr1:219968786|219969089 hsa-miR-6803-5p 1 0 0
chr1:219968786|219969089 hsa-miR-6813-5p 1 0 0
chr1:219968786|219969089 hsa-miR-6779-5p 1 0 0
chr1:219968786|219969089 hsa-miR-6797-5p 1 0 0
chr1:219968786|219969089 hsa-miR-4728-5p 1 0 0
chr1:219968786|219969089 hsa-miR-6836-5p 1 0 0
chr1:219968786|219969089 hsa-miR-1237-5p 1 0 0
chr1:219968786|219969089 hsa-miR-328-5p 1 0 0
chr1:219968786|219969089 hsa-miR-4685-5p 1 0 0
chr1:219968786|219969089 hsa-miR-4745-5p 1 0 0
chr1:219968786|219969089 hsa-miR-6846-5p 1 0 0
chr1:219968786|219969089 hsa-miR-6848-5p 1 0 0
chr1:219968786|219969089 hsa-miR-4697-5p 1 0 0
chr1:219968786|219969089 hsa-miR-4758-5p 1 0 0
chr1:219968786|219969089 hsa-miR-1266-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:219968786|219969089
ORF Type ORF1
Protein Length 74
Nucleotide Length 225
Protein Sequence MQWKGIAICSINEWNSYLLLISGIKILNLVLHPWELKAFASPSNHSVNCSLEPNVSVARTLPSTTPYLVAATEG
Nucleotide Sequence TTGCAATGGAAAGGAATAGCAATTTGCAGCATAAATGAGTGGAATTCTTATTTGTTATTAATTTCAGGGATCAAGATCTTGAACCTGGTGCTCCATCCATGGGAGCTAAAAGCCTTTGCATCCCCTTCAAACCACTCTGTGAACTGCAGCCTGGAGCCAAATGTGTCTGTGGCAAGAACCCTGCCAAGTACTACACCTTATTTGGTCGCAGCTACTGAGGGATGA

CircID chr1:219968786|219969089
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MCLWQEPCQVLHLIWSQLLRDERKPP
Nucleotide Sequence ATGTGTCTGTGGCAAGAACCCTGCCAAGTACTACACCTTATTTGGTCGCAGCTACTGAGGGATGAACGAAAGCCCCCT

CircID chr1:219968786|219969089
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MGAKSLCIPFKPLCELQPGAKCVCGKNPAKYYTLFGRSY
Nucleotide Sequence ATGGGAGCTAAAAGCCTTTGCATCCCCTTCAAACCACTCTGTGAACTGCAGCCTGGAGCCAAATGTGTCTGTGGCAAGAACCCTGCCAAGTACTACACCTTATTTGGTCGCAGCTACTGA

CircID chr1:219968786|219969089
ORF Type ORF4
Protein Length 38
Nucleotide Length 117
Protein Sequence MAGFLPQTHLAPGCSSQSGLKGMQRLLAPMDGAPGSRS
Nucleotide Sequence TTGGCAGGGTTCTTGCCACAGACACATTTGGCTCCAGGCTGCAGTTCACAGAGTGGTTTGAAGGGGATGCAAAGGCTTTTAGCTCCCATGGATGGAGCACCAGGTTCAAGATCTTGA

CircID chr1:219968786|219969089
ORF Type ORF5
Protein Length 39
Nucleotide Length 120
Protein Sequence MKLITNKNSTHLCCKLLFLSIAIFQKFCQLIRFTWQWSF
Nucleotide Sequence CTGAAATTAATAACAAATAAGAATTCCACTCATTTATGCTGCAAATTGCTATTCCTTTCCATTGCAATTTTTCAAAAGTTTTGCCAGTTAATTAGGTTTACCTGGCAGTGGTCTTTTTGA

CircID chr1:219968786|219969089
ORF Type ORF6
Protein Length 33
Nucleotide Length 102
Protein Sequence MQFTEWFEGDAKAFSSHGWSTRFKILIPEINNK
Nucleotide Sequence CTGCAGTTCACAGAGTGGTTTGAAGGGGATGCAAAGGCTTTTAGCTCCCATGGATGGAGCACCAGGTTCAAGATCTTGATCCCTGAAATTAATAACAAATAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites