CircRNA Information

General Information
circRNA Basic Information
CircID chr1:220698489|220698684
Strand -
CircType exon
Host Gene ENSG00000162817.6;
Algorism CIRI2;
Sequence ACGTGAGATAATTACAGCTTGCCCCACAACACTGGGTGTTGGAGAAAGGGAGAGATAGTCATAAGTGGAAGAAAAAGCCAAGCATAGTGAGTGGGAAAGAGAGTGAGAGCCTGTGCAGGCTGCTGACGAGCCCCAGGCAGCCCACAAGTTTCTCGTGGGGAGATGGAGGCAGAGCCCAGGGTAGGGGACAGAGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:220698489|220698684 hsa-miR-10a-5p 0 0 1
chr1:220698489|220698684 hsa-miR-10a-3p 0 0 1
chr1:220698489|220698684 hsa-miR-10b-5p 0 0 1
chr1:220698489|220698684 hsa-miR-10b-3p 0 0 1
chr1:220698489|220698684 hsa-miR-204-5p 0 0 1
chr1:220698489|220698684 hsa-miR-204-3p 0 0 1
chr1:220698489|220698684 hsa-miR-211-5p 0 0 1
chr1:220698489|220698684 hsa-miR-211-3p 0 0 1
chr1:220698489|220698684 hsa-miR-214-5p 0 0 1
chr1:220698489|220698684 hsa-miR-214-3p 0 0 1
chr1:220698489|220698684 hsa-miR-484 0 1 1
chr1:220698489|220698684 hsa-miR-596 1 1 1
chr1:220698489|220698684 hsa-miR-661 1 1 1
chr1:220698489|220698684 hsa-miR-760 0 0 1
chr1:220698489|220698684 hsa-miR-922 0 0 1
chr1:220698489|220698684 hsa-miR-944 0 0 1
chr1:220698489|220698684 hsa-miR-491-5p 0 0 1
chr1:220698489|220698684 hsa-miR-486-3p 0 0 1
chr1:220698489|220698684 hsa-miR-199a-5p 0 1 1
chr1:220698489|220698684 hsa-miR-188-3p 0 0 1
chr1:220698489|220698684 hsa-miR-199b-5p 0 1 1
chr1:220698489|220698684 hsa-miR-515-5p 0 0 1
chr1:220698489|220698684 hsa-miR-1260 0 0 1
chr1:220698489|220698684 hsa-miR-1254 0 0 1
chr1:220698489|220698684 hsa-miR-326 1 1 0
chr1:220698489|220698684 hsa-miR-612 1 0 0
chr1:220698489|220698684 hsa-miR-657 0 1 0
chr1:220698489|220698684 hsa-miR-1913 1 0 0
chr1:220698489|220698684 hsa-miR-4292 1 1 0
chr1:220698489|220698684 hsa-miR-3909 1 0 0
chr1:220698489|220698684 hsa-miR-1587 0 1 0
chr1:220698489|220698684 hsa-miR-141-5p 1 0 0
chr1:220698489|220698684 hsa-miR-3194-3p 1 0 0
chr1:220698489|220698684 hsa-miR-6836-3p 1 1 0
chr1:220698489|220698684 hsa-miR-149-5p 1 0 0
chr1:220698489|220698684 hsa-miR-6822-3p 1 1 0
chr1:220698489|220698684 hsa-miR-27a-5p 1 0 0
chr1:220698489|220698684 hsa-miR-6875-3p 1 0 0
chr1:220698489|220698684 hsa-miR-6873-3p 1 1 0
chr1:220698489|220698684 hsa-miR-7110-3p 1 1 0
chr1:220698489|220698684 hsa-miR-6845-3p 1 0 0
chr1:220698489|220698684 hsa-miR-3151-5p 0 1 0
chr1:220698489|220698684 hsa-miR-4753-3p 1 1 0
chr1:220698489|220698684 hsa-miR-6728-3p 1 1 0
chr1:220698489|220698684 hsa-miR-6882-3p 1 1 0
chr1:220698489|220698684 hsa-miR-4713-5p 1 0 0
chr1:220698489|220698684 hsa-miR-4436b-5p 1 1 0
chr1:220698489|220698684 hsa-miR-6852-5p 0 1 0
chr1:220698489|220698684 hsa-miR-939-3p 1 1 0
chr1:220698489|220698684 hsa-miR-6763-3p 1 0 0
chr1:220698489|220698684 hsa-miR-4783-3p 0 1 0
chr1:220698489|220698684 hsa-miR-5001-3p 0 1 0
chr1:220698489|220698684 hsa-miR-6809-3p 1 0 0
chr1:220698489|220698684 hsa-miR-4646-3p 1 0 0
chr1:220698489|220698684 hsa-miR-2115-5p 1 0 0
chr1:220698489|220698684 hsa-miR-345-5p 1 0 0
chr1:220698489|220698684 hsa-miR-6813-3p 1 0 0
chr1:220698489|220698684 hsa-miR-6867-3p 0 1 0
chr1:220698489|220698684 hsa-miR-6741-3p 0 1 0
chr1:220698489|220698684 hsa-miR-6752-3p 1 0 0
chr1:220698489|220698684 hsa-miR-7848-3p 1 0 0
chr1:220698489|220698684 hsa-miR-6738-3p 0 1 0
chr1:220698489|220698684 hsa-miR-6794-3p 0 1 0
chr1:220698489|220698684 hsa-miR-6760-3p 1 0 0
chr1:220698489|220698684 hsa-miR-1285-5p 0 1 0
chr1:220698489|220698684 hsa-miR-130b-5p 0 1 0
chr1:220698489|220698684 hsa-miR-6779-3p 1 0 0
chr1:220698489|220698684 hsa-miR-6732-3p 0 1 0
chr1:220698489|220698684 hsa-miR-135a-5p 1 1 0
chr1:220698489|220698684 hsa-miR-3162-3p 1 0 0
chr1:220698489|220698684 hsa-miR-6509-3p 1 0 0
chr1:220698489|220698684 hsa-miR-3664-5p 1 0 0
chr1:220698489|220698684 hsa-miR-3682-5p 1 0 0
chr1:220698489|220698684 hsa-miR-3620-5p 1 1 0
chr1:220698489|220698684 hsa-miR-6791-5p 1 1 0
chr1:220698489|220698684 hsa-miR-6753-3p 1 0 0
chr1:220698489|220698684 hsa-miR-6805-3p 1 1 0
chr1:220698489|220698684 hsa-miR-6810-3p 1 0 0
chr1:220698489|220698684 hsa-miR-6775-3p 1 0 0
chr1:220698489|220698684 hsa-miR-3130-5p 0 1 0
chr1:220698489|220698684 hsa-miR-504-5p 1 0 0
chr1:220698489|220698684 hsa-miR-6769b-3p 0 1 0
chr1:220698489|220698684 hsa-miR-330-5p 1 0 0
chr1:220698489|220698684 hsa-miR-6783-3p 1 1 0
chr1:220698489|220698684 hsa-miR-4482-5p 0 1 0
chr1:220698489|220698684 hsa-miR-6874-3p 1 0 0
chr1:220698489|220698684 hsa-miR-135b-5p 1 0 0
chr1:220698489|220698684 hsa-miR-627-3p 0 1 0
chr1:220698489|220698684 hsa-miR-4712-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:220698489|220698684
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MEKGRDSHKWKKKPSIVSGKESESLCRLLTSPRQPTSFSWGDGGRAQGRGQS
Nucleotide Sequence TTGGAGAAAGGGAGAGATAGTCATAAGTGGAAGAAAAAGCCAAGCATAGTGAGTGGGAAAGAGAGTGAGAGCCTGTGCAGGCTGCTGACGAGCCCCAGGCAGCCCACAAGTTTCTCGTGGGGAGATGGAGGCAGAGCCCAGGGTAGGGGACAGAGC

CircID chr1:220698489|220698684
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MPPSPHEKLVGCLGLVSSLHRLSLSFPLTMLGFFFHL
Nucleotide Sequence CTGCCTCCATCTCCCCACGAGAAACTTGTGGGCTGCCTGGGGCTCGTCAGCAGCCTGCACAGGCTCTCACTCTCTTTCCCACTCACTATGCTTGGCTTTTTCTTCCACTTATGA

CircID chr1:220698489|220698684
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence MWAAWGSSAACTGSHSLSHSLCLAFSSTYDYLSLSPTPSVVGQAVIISR
Nucleotide Sequence TTGTGGGCTGCCTGGGGCTCGTCAGCAGCCTGCACAGGCTCTCACTCTCTTTCCCACTCACTATGCTTGGCTTTTTCTTCCACTTATGACTATCTCTCCCTTTCTCCAACACCCAGTGTTGTGGGGCAAGCTGTAATTATCTCACGT

CircID chr1:220698489|220698684
ORF Type ORF4
Protein Length 59
Nucleotide Length 180
Protein Sequence MSPTLGSASISPRETCGLPGARQQPAQALTLFPTHYAWLFLPLMTISPFLQHPVLWGKL
Nucleotide Sequence CTGTCCCCTACCCTGGGCTCTGCCTCCATCTCCCCACGAGAAACTTGTGGGCTGCCTGGGGCTCGTCAGCAGCCTGCACAGGCTCTCACTCTCTTTCCCACTCACTATGCTTGGCTTTTTCTTCCACTTATGACTATCTCTCCCTTTCTCCAACACCCAGTGTTGTGGGGCAAGCTGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites