CircRNA Information

General Information
circRNA Basic Information
CircID chr1:223231103|223231330
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTCCCTGCACTGCACCAGATCTAGACAGGCTGTCCACCGCAGACCCTGTTTCCCAGACCCCCTTGTCACCTGGCTCCCCACTGGCTTTGTCCAGAGGGAGCCTGGAGGGTGGGCAGGTGGAGAACCAGGCTACTTCTCCCTCACTGTTCCTGCCCTGGGGACATCTCCAGCGGGGTCTGAGTTTCCCCGGGCTCCAGTTCCCGCGGGATAGACCTCCATGGTTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:223231103|223231330 hsa-miR-148a-5p 0 0 1
chr1:223231103|223231330 hsa-miR-148a-3p 0 0 1
chr1:223231103|223231330 hsa-miR-152-5p 0 0 1
chr1:223231103|223231330 hsa-miR-152-3p 0 0 1
chr1:223231103|223231330 hsa-miR-148b-5p 0 0 1
chr1:223231103|223231330 hsa-miR-148b-3p 0 0 1
chr1:223231103|223231330 hsa-miR-422a 0 0 1
chr1:223231103|223231330 hsa-miR-484 0 0 1
chr1:223231103|223231330 hsa-miR-562 0 0 1
chr1:223231103|223231330 hsa-miR-575 0 1 1
chr1:223231103|223231330 hsa-miR-596 0 0 1
chr1:223231103|223231330 hsa-miR-620 0 0 1
chr1:223231103|223231330 hsa-miR-873-5p 0 0 1
chr1:223231103|223231330 hsa-miR-873-3p 0 0 1
chr1:223231103|223231330 hsa-miR-939-5p 0 0 1
chr1:223231103|223231330 hsa-miR-939-3p 0 0 1
chr1:223231103|223231330 hsa-miR-1182 0 1 1
chr1:223231103|223231330 hsa-miR-1270 0 0 1
chr1:223231103|223231330 hsa-miR-125a-3p 0 1 1
chr1:223231103|223231330 hsa-miR-491-5p 0 0 1
chr1:223231103|223231330 hsa-miR-515-5p 0 0 1
chr1:223231103|223231330 hsa-miR-642 0 0 1
chr1:223231103|223231330 hsa-miR-378 0 0 1
chr1:223231103|223231330 hsa-miR-637 1 0 0
chr1:223231103|223231330 hsa-miR-298 1 0 0
chr1:223231103|223231330 hsa-miR-760 1 0 0
chr1:223231103|223231330 hsa-miR-921 0 1 0
chr1:223231103|223231330 hsa-miR-1231 1 0 0
chr1:223231103|223231330 hsa-miR-2861 1 0 0
chr1:223231103|223231330 hsa-miR-3138 1 1 0
chr1:223231103|223231330 hsa-miR-3154 1 0 0
chr1:223231103|223231330 hsa-miR-3155a 0 1 0
chr1:223231103|223231330 hsa-miR-4314 0 1 0
chr1:223231103|223231330 hsa-miR-4321 1 0 0
chr1:223231103|223231330 hsa-miR-4261 0 1 0
chr1:223231103|223231330 hsa-miR-3155b 0 1 0
chr1:223231103|223231330 hsa-miR-4510 0 1 0
chr1:223231103|223231330 hsa-miR-4516 0 1 0
chr1:223231103|223231330 hsa-miR-4734 1 0 0
chr1:223231103|223231330 hsa-miR-4739 1 0 0
chr1:223231103|223231330 hsa-miR-5090 0 1 0
chr1:223231103|223231330 hsa-miR-6133 1 1 0
chr1:223231103|223231330 hsa-miR-6860 1 1 0
chr1:223231103|223231330 hsa-miR-8059 0 1 0
chr1:223231103|223231330 hsa-miR-8089 1 1 0
chr1:223231103|223231330 hsa-miR-1843 0 1 0
chr1:223231103|223231330 hsa-miR-12115 1 0 0
chr1:223231103|223231330 hsa-miR-143-5p 0 1 0
chr1:223231103|223231330 hsa-miR-214-5p 0 1 0
chr1:223231103|223231330 hsa-miR-4726-3p 0 1 0
chr1:223231103|223231330 hsa-miR-3150a-3p 1 0 0
chr1:223231103|223231330 hsa-miR-139-3p 1 0 0
chr1:223231103|223231330 hsa-miR-1236-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6089 1 0 0
chr1:223231103|223231330 hsa-miR-3192-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6746-5p 1 0 0
chr1:223231103|223231330 hsa-miR-4722-5p 1 0 0
chr1:223231103|223231330 hsa-miR-505-5p 0 1 0
chr1:223231103|223231330 hsa-miR-6721-5p 1 1 0
chr1:223231103|223231330 hsa-miR-7845-5p 0 1 0
chr1:223231103|223231330 hsa-miR-1288-3p 1 0 0
chr1:223231103|223231330 hsa-miR-6732-5p 0 1 0
chr1:223231103|223231330 hsa-miR-6827-5p 1 1 0
chr1:223231103|223231330 hsa-miR-6798-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6760-5p 0 1 0
chr1:223231103|223231330 hsa-miR-5006-5p 1 0 0
chr1:223231103|223231330 hsa-miR-1226-5p 1 0 0
chr1:223231103|223231330 hsa-miR-4763-5p 0 1 0
chr1:223231103|223231330 hsa-miR-1229-5p 1 0 0
chr1:223231103|223231330 hsa-miR-30c-2-3p 1 0 0
chr1:223231103|223231330 hsa-miR-4638-3p 0 1 0
chr1:223231103|223231330 hsa-miR-4446-3p 1 0 0
chr1:223231103|223231330 hsa-miR-597-3p 0 1 0
chr1:223231103|223231330 hsa-miR-3940-3p 0 1 0
chr1:223231103|223231330 hsa-miR-6865-3p 0 1 0
chr1:223231103|223231330 hsa-miR-6777-3p 0 1 0
chr1:223231103|223231330 hsa-miR-518c-5p 0 1 0
chr1:223231103|223231330 hsa-miR-4802-5p 0 1 0
chr1:223231103|223231330 hsa-miR-1207-5p 1 0 0
chr1:223231103|223231330 hsa-miR-4763-3p 1 0 0
chr1:223231103|223231330 hsa-miR-6775-5p 1 1 0
chr1:223231103|223231330 hsa-miR-6726-5p 1 1 0
chr1:223231103|223231330 hsa-miR-6737-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6743-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6752-5p 1 0 0
chr1:223231103|223231330 hsa-miR-7110-5p 1 0 0
chr1:223231103|223231330 hsa-miR-1249-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6751-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6879-5p 1 1 0
chr1:223231103|223231330 hsa-miR-10526-3p 1 0 0
chr1:223231103|223231330 hsa-miR-328-5p 1 0 0
chr1:223231103|223231330 hsa-miR-4632-5p 1 1 0
chr1:223231103|223231330 hsa-miR-4685-5p 1 1 0
chr1:223231103|223231330 hsa-miR-6777-5p 0 1 0
chr1:223231103|223231330 hsa-miR-6794-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6848-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6858-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6889-5p 0 1 0
chr1:223231103|223231330 hsa-miR-4436b-3p 0 1 0
chr1:223231103|223231330 hsa-miR-4723-5p 0 1 0
chr1:223231103|223231330 hsa-miR-1266-5p 0 1 0
chr1:223231103|223231330 hsa-miR-3198 1 1 0
chr1:223231103|223231330 hsa-miR-6855-5p 1 0 0
chr1:223231103|223231330 hsa-miR-4700-5p 1 0 0
chr1:223231103|223231330 hsa-miR-4646-5p 1 1 0
chr1:223231103|223231330 hsa-miR-6750-5p 1 0 0
chr1:223231103|223231330 hsa-miR-6837-5p 0 1 0
chr1:223231103|223231330 hsa-miR-4756-5p 1 0 0
chr1:223231103|223231330 hsa-miR-4676-5p 0 1 0
chr1:223231103|223231330 hsa-miR-6764-5p 0 1 0
chr1:223231103|223231330 hsa-miR-412-3p 0 1 0
chr1:223231103|223231330 hsa-miR-7153-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:223231103|223231330
ORF Type ORF1
Protein Length 66
Nucleotide Length 198
Protein Sequence MSTADPVSQTPLSPGSPLALSRGSLEGGQVENQATSPSLFLPWGHLQRGLSFPGLQFPRDRPPWFH
Nucleotide Sequence CTGTCCACCGCAGACCCTGTTTCCCAGACCCCCTTGTCACCTGGCTCCCCACTGGCTTTGTCCAGAGGGAGCCTGGAGGGTGGGCAGGTGGAGAACCAGGCTACTTCTCCCTCACTGTTCCTGCCCTGGGGACATCTCCAGCGGGGTCTGAGTTTCCCCGGGCTCCAGTTCCCGCGGGATAGACCTCCATGGTTCCAC

CircID chr1:223231103|223231330
ORF Type ORF2
Protein Length 44
Nucleotide Length 135
Protein Sequence MFPRPPCHLAPHWLCPEGAWRVGRWRTRLLLPHCSCPGDISSGV
Nucleotide Sequence CTGTTTCCCAGACCCCCTTGTCACCTGGCTCCCCACTGGCTTTGTCCAGAGGGAGCCTGGAGGGTGGGCAGGTGGAGAACCAGGCTACTTCTCCCTCACTGTTCCTGCCCTGGGGACATCTCCAGCGGGGTCTGA

CircID chr1:223231103|223231330
ORF Type ORF3
Protein Length 68
Nucleotide Length 207
Protein Sequence MHCTRSRQAVHRRPCFPDPLVTWLPTGFVQREPGGWAGGEPGYFSLTVPALGTSPAGSEFPRAPVPAG
Nucleotide Sequence CTGCACTGCACCAGATCTAGACAGGCTGTCCACCGCAGACCCTGTTTCCCAGACCCCCTTGTCACCTGGCTCCCCACTGGCTTTGTCCAGAGGGAGCCTGGAGGGTGGGCAGGTGGAGAACCAGGCTACTTCTCCCTCACTGTTCCTGCCCTGGGGACATCTCCAGCGGGGTCTGAGTTTCCCCGGGCTCCAGTTCCCGCGGGATAG

CircID chr1:223231103|223231330
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MDKASGEPGDKGVWETGSAVDSLSRSGAVQG
Nucleotide Sequence CTGGACAAAGCCAGTGGGGAGCCAGGTGACAAGGGGGTCTGGGAAACAGGGTCTGCGGTGGACAGCCTGTCTAGATCTGGTGCAGTGCAGGGA

CircID chr1:223231103|223231330
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MEVYPAGTGARGNSDPAGDVPRAGTVREK
Nucleotide Sequence ATGGAGGTCTATCCCGCGGGAACTGGAGCCCGGGGAAACTCAGACCCCGCTGGAGATGTCCCCAGGGCAGGAACAGTGAGGGAGAAGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites