CircRNA Information

General Information
circRNA Basic Information
CircID chr1:224227832|224228011
Strand +
CircType exon
Host Gene ENSG00000237101.1;
Algorism CIRI2;
Sequence AGTTCTGGAGAGTGTTGGGCAGGATTGGTTCTTCTGGAGCCTTTGTCCTCACTGATGGCTGTCTTCTCCCAGCGCCTGCATGTGCTTTTCCCTCTGCGCACATGCTCTTCCCTCCTGTGCCCTAATCCCCTCTTTTTGTAAGGAGAGCAGTCATATTGGATAAGAGTCTACCTGTATGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:224227832|224228011 hsa-miR-379-5p 0 0 1
chr1:224227832|224228011 hsa-miR-379-3p 0 0 1
chr1:224227832|224228011 hsa-miR-552-5p 0 0 1
chr1:224227832|224228011 hsa-miR-552-3p 0 0 1
chr1:224227832|224228011 hsa-miR-583 0 0 1
chr1:224227832|224228011 hsa-miR-1296-5p 0 0 1
chr1:224227832|224228011 hsa-miR-1296-3p 0 0 1
chr1:224227832|224228011 hsa-miR-766-5p 0 0 1
chr1:224227832|224228011 hsa-miR-766-3p 0 0 1
chr1:224227832|224228011 hsa-miR-933 0 1 1
chr1:224227832|224228011 hsa-miR-1253 0 1 1
chr1:224227832|224228011 hsa-miR-1224-5p 0 0 1
chr1:224227832|224228011 hsa-miR-524-5p 0 0 1
chr1:224227832|224228011 hsa-miR-485-3p 0 1 1
chr1:224227832|224228011 hsa-miR-548b-3p 0 0 1
chr1:224227832|224228011 hsa-miR-520d-5p 0 0 1
chr1:224227832|224228011 hsa-miR-658 1 0 0
chr1:224227832|224228011 hsa-miR-760 1 0 0
chr1:224227832|224228011 hsa-miR-3132 1 0 0
chr1:224227832|224228011 hsa-miR-3154 1 0 0
chr1:224227832|224228011 hsa-miR-3665 1 0 0
chr1:224227832|224228011 hsa-miR-3945 1 0 0
chr1:224227832|224228011 hsa-miR-4425 1 0 0
chr1:224227832|224228011 hsa-miR-4450 1 1 0
chr1:224227832|224228011 hsa-miR-4489 1 0 0
chr1:224227832|224228011 hsa-miR-4510 0 1 0
chr1:224227832|224228011 hsa-miR-4689 1 0 0
chr1:224227832|224228011 hsa-miR-4706 1 0 0
chr1:224227832|224228011 hsa-miR-4739 1 1 0
chr1:224227832|224228011 hsa-miR-4779 1 1 0
chr1:224227832|224228011 hsa-miR-5194 1 0 0
chr1:224227832|224228011 hsa-miR-6077 0 1 0
chr1:224227832|224228011 hsa-miR-6085 1 0 0
chr1:224227832|224228011 hsa-miR-6127 1 0 0
chr1:224227832|224228011 hsa-miR-6129 1 0 0
chr1:224227832|224228011 hsa-miR-8085 1 0 0
chr1:224227832|224228011 hsa-miR-6734-5p 1 0 0
chr1:224227832|224228011 hsa-miR-4731-5p 1 0 0
chr1:224227832|224228011 hsa-miR-125b-1-3p 1 0 0
chr1:224227832|224228011 hsa-miR-6857-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6799-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6510-5p 1 0 0
chr1:224227832|224228011 hsa-miR-5187-5p 1 0 0
chr1:224227832|224228011 hsa-miR-3192-5p 1 1 0
chr1:224227832|224228011 hsa-miR-6873-5p 1 1 0
chr1:224227832|224228011 hsa-miR-6867-5p 0 1 0
chr1:224227832|224228011 hsa-miR-6746-5p 1 0 0
chr1:224227832|224228011 hsa-miR-4722-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6727-5p 1 0 0
chr1:224227832|224228011 hsa-miR-197-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6716-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6732-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6798-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6760-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6881-5p 1 0 0
chr1:224227832|224228011 hsa-miR-2467-3p 0 1 0
chr1:224227832|224228011 hsa-miR-3194-5p 1 0 0
chr1:224227832|224228011 hsa-miR-5088-5p 1 0 0
chr1:224227832|224228011 hsa-miR-7109-5p 1 0 0
chr1:224227832|224228011 hsa-miR-1226-5p 1 0 0
chr1:224227832|224228011 hsa-miR-30c-2-3p 0 1 0
chr1:224227832|224228011 hsa-miR-149-3p 1 0 0
chr1:224227832|224228011 hsa-miR-6878-5p 0 1 0
chr1:224227832|224228011 hsa-miR-5010-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6499-5p 1 0 0
chr1:224227832|224228011 hsa-miR-483-5p 1 0 0
chr1:224227832|224228011 hsa-miR-589-5p 0 1 0
chr1:224227832|224228011 hsa-miR-4763-3p 1 0 0
chr1:224227832|224228011 hsa-miR-1249-5p 1 1 0
chr1:224227832|224228011 hsa-miR-6780a-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6788-5p 0 1 0
chr1:224227832|224228011 hsa-miR-6797-5p 1 1 0
chr1:224227832|224228011 hsa-miR-6879-5p 1 0 0
chr1:224227832|224228011 hsa-miR-4728-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6780b-5p 1 0 0
chr1:224227832|224228011 hsa-miR-4632-5p 1 0 0
chr1:224227832|224228011 hsa-miR-4649-5p 1 0 0
chr1:224227832|224228011 hsa-miR-4725-3p 1 0 0
chr1:224227832|224228011 hsa-miR-4745-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6729-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6738-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6795-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6848-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6887-5p 1 0 0
chr1:224227832|224228011 hsa-miR-30c-1-3p 0 1 0
chr1:224227832|224228011 hsa-miR-6758-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6856-5p 1 0 0
chr1:224227832|224228011 hsa-miR-1914-3p 1 0 0
chr1:224227832|224228011 hsa-miR-4665-5p 1 0 0
chr1:224227832|224228011 hsa-miR-4646-5p 1 0 0
chr1:224227832|224228011 hsa-miR-6891-5p 1 0 0
chr1:224227832|224228011 hsa-miR-4716-3p 1 1 0
chr1:224227832|224228011 hsa-miR-6750-5p 1 0 0
chr1:224227832|224228011 hsa-miR-1185-1-3p 1 1 0
chr1:224227832|224228011 hsa-miR-6811-5p 0 1 0
chr1:224227832|224228011 hsa-miR-3927-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:224227832|224228011
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MVLLEPLSSLMAVFSQRLHVLFPLRTCSSLLCPNPLFL
Nucleotide Sequence TTGGTTCTTCTGGAGCCTTTGTCCTCACTGATGGCTGTCTTCTCCCAGCGCCTGCATGTGCTTTTCCCTCTGCGCACATGCTCTTCCCTCCTGTGCCCTAATCCCCTCTTTTTGTAA
CircID chr1:224227832|224228011
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MSSPSACMCFSLCAHALPSCALIPSFCKESSHIG
Nucleotide Sequence CTGTCTTCTCCCAGCGCCTGCATGTGCTTTTCCCTCTGCGCACATGCTCTTCCCTCCTGTGCCCTAATCCCCTCTTTTTGTAAGGAGAGCAGTCATATTGGATAA
CircID chr1:224227832|224228011
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MGRIGSSGAFVLTDGCLLPAPACAFPSAHMLFPPVP
Nucleotide Sequence TTGGGCAGGATTGGTTCTTCTGGAGCCTTTGTCCTCACTGATGGCTGTCTTCTCCCAGCGCCTGCATGTGCTTTTCCCTCTGCGCACATGCTCTTCCCTCCTGTGCCCTAA
CircID chr1:224227832|224228011
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MLSLQKEGIRAQEGRACAQREKHMQALGEDSHQ
Nucleotide Sequence CTGCTCTCCTTACAAAAAGAGGGGATTAGGGCACAGGAGGGAAGAGCATGTGCGCAGAGGGAAAAGCACATGCAGGCGCTGGGAGAAGACAGCCATCAGTGA
CircID chr1:224227832|224228011
ORF Type ORF5
Protein Length 34
Nucleotide Length 102
Protein Sequence MCAEGKAHAGAGRRQPSVRTKAPEEPILPNTLQN
Nucleotide Sequence ATGTGCGCAGAGGGAAAAGCACATGCAGGCGCTGGGAGAAGACAGCCATCAGTGAGGACAAAGGCTCCAGAAGAACCAATCCTGCCCAACACTCTCCAGAAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab