CircRNA Information

General Information
circRNA Basic Information
CircID chr1:225519198|225519322
Strand -
CircType exon
Host Gene ENSG00000154380.15;
Algorism CIRI2;
Sequence CAGCACTTGATATTCTGCGCTCTCTCTCCCATTCCAGCTGTTCCCTTTCTAACTGCTCTTGTCGCTCCCTTTCTTGCCTCTCCCGTTCCAGTCTCTCCAGCCTCTCTCGTTCTTGTCTTTCTTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:225519198|225519322 hsa-miR-31-5p 0 0 1
chr1:225519198|225519322 hsa-miR-31-3p 0 0 1
chr1:225519198|225519322 hsa-miR-185-5p 0 0 1
chr1:225519198|225519322 hsa-miR-185-3p 0 0 1
chr1:225519198|225519322 hsa-miR-206 1 0 1
chr1:225519198|225519322 hsa-miR-302a-5p 0 0 1
chr1:225519198|225519322 hsa-miR-302a-3p 0 0 1
chr1:225519198|225519322 hsa-miR-302b-5p 0 0 1
chr1:225519198|225519322 hsa-miR-302b-3p 0 0 1
chr1:225519198|225519322 hsa-miR-302c-5p 0 0 1
chr1:225519198|225519322 hsa-miR-302c-3p 0 0 1
chr1:225519198|225519322 hsa-miR-302d-5p 0 0 1
chr1:225519198|225519322 hsa-miR-302d-3p 0 0 1
chr1:225519198|225519322 hsa-miR-372-5p 0 0 1
chr1:225519198|225519322 hsa-miR-372-3p 0 0 1
chr1:225519198|225519322 hsa-miR-373-5p 0 0 1
chr1:225519198|225519322 hsa-miR-373-3p 0 0 1
chr1:225519198|225519322 hsa-miR-335-5p 0 0 1
chr1:225519198|225519322 hsa-miR-335-3p 0 0 1
chr1:225519198|225519322 hsa-miR-520e-5p 0 0 1
chr1:225519198|225519322 hsa-miR-520e-3p 0 0 1
chr1:225519198|225519322 hsa-miR-520b-5p 0 0 1
chr1:225519198|225519322 hsa-miR-520b-3p 0 0 1
chr1:225519198|225519322 hsa-miR-613 0 0 1
chr1:225519198|225519322 hsa-miR-302e 0 0 1
chr1:225519198|225519322 hsa-miR-512-3p 0 0 1
chr1:225519198|225519322 hsa-miR-485-5p 1 0 1
chr1:225519198|225519322 hsa-miR-1207-3p 0 0 1
chr1:225519198|225519322 hsa-miR-520d-3p 0 0 1
chr1:225519198|225519322 hsa-miR-520a-3p 0 0 1
chr1:225519198|225519322 hsa-miR-520c-3p 0 0 1
chr1:225519198|225519322 hsa-miR-1 0 0 1
chr1:225519198|225519322 hsa-miR-663a 1 0 0
chr1:225519198|225519322 hsa-miR-762 1 0 0
chr1:225519198|225519322 hsa-miR-920 1 0 0
chr1:225519198|225519322 hsa-miR-1270 1 0 0
chr1:225519198|225519322 hsa-miR-1275 1 0 0
chr1:225519198|225519322 hsa-miR-2861 1 0 0
chr1:225519198|225519322 hsa-miR-3138 1 0 0
chr1:225519198|225519322 hsa-miR-3154 1 0 0
chr1:225519198|225519322 hsa-miR-3161 1 0 0
chr1:225519198|225519322 hsa-miR-3175 1 0 0
chr1:225519198|225519322 hsa-miR-3188 1 0 0
chr1:225519198|225519322 hsa-miR-3196 1 0 0
chr1:225519198|225519322 hsa-miR-3197 1 0 0
chr1:225519198|225519322 hsa-miR-4298 1 0 0
chr1:225519198|225519322 hsa-miR-4306 1 0 0
chr1:225519198|225519322 hsa-miR-3652 1 0 0
chr1:225519198|225519322 hsa-miR-4429 1 0 0
chr1:225519198|225519322 hsa-miR-4430 1 0 0
chr1:225519198|225519322 hsa-miR-4458 1 0 0
chr1:225519198|225519322 hsa-miR-3135b 1 0 0
chr1:225519198|225519322 hsa-miR-4462 1 0 0
chr1:225519198|225519322 hsa-miR-4463 1 0 0
chr1:225519198|225519322 hsa-miR-4466 1 0 0
chr1:225519198|225519322 hsa-miR-4489 1 0 0
chr1:225519198|225519322 hsa-miR-4498 1 0 0
chr1:225519198|225519322 hsa-miR-4499 1 0 0
chr1:225519198|225519322 hsa-miR-4505 1 0 0
chr1:225519198|225519322 hsa-miR-2392 1 0 0
chr1:225519198|225519322 hsa-miR-4508 1 0 0
chr1:225519198|225519322 hsa-miR-4510 1 0 0
chr1:225519198|225519322 hsa-miR-4514 1 0 0
chr1:225519198|225519322 hsa-miR-4523 1 0 0
chr1:225519198|225519322 hsa-miR-1587 1 0 0
chr1:225519198|225519322 hsa-miR-4538 1 0 0
chr1:225519198|225519322 hsa-miR-3976 1 0 0
chr1:225519198|225519322 hsa-miR-4644 1 0 0
chr1:225519198|225519322 hsa-miR-4648 1 0 0
chr1:225519198|225519322 hsa-miR-4688 1 0 0
chr1:225519198|225519322 hsa-miR-4689 1 0 0
chr1:225519198|225519322 hsa-miR-4739 1 0 0
chr1:225519198|225519322 hsa-miR-5192 1 0 0
chr1:225519198|225519322 hsa-miR-5194 1 0 0
chr1:225519198|225519322 hsa-miR-5698 1 0 0
chr1:225519198|225519322 hsa-miR-5739 1 0 0
chr1:225519198|225519322 hsa-miR-5787 1 0 0
chr1:225519198|225519322 hsa-miR-6081 1 0 0
chr1:225519198|225519322 hsa-miR-6085 1 0 0
chr1:225519198|225519322 hsa-miR-6086 1 0 0
chr1:225519198|225519322 hsa-miR-6090 1 0 0
chr1:225519198|225519322 hsa-miR-6124 1 0 0
chr1:225519198|225519322 hsa-miR-6127 1 0 0
chr1:225519198|225519322 hsa-miR-6128 1 0 0
chr1:225519198|225519322 hsa-miR-6129 1 0 0
chr1:225519198|225519322 hsa-miR-6133 1 0 0
chr1:225519198|225519322 hsa-miR-6165 1 0 0
chr1:225519198|225519322 hsa-miR-8052 1 0 0
chr1:225519198|225519322 hsa-miR-8085 1 0 0
chr1:225519198|225519322 hsa-miR-8089 1 0 0
chr1:225519198|225519322 hsa-miR-12115 1 0 0
chr1:225519198|225519322 hsa-miR-12120 1 0 0
chr1:225519198|225519322 hsa-miR-134-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4433b-3p 1 0 0
chr1:225519198|225519322 hsa-miR-4731-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4433a-3p 1 0 0
chr1:225519198|225519322 hsa-miR-3150a-3p 1 0 0
chr1:225519198|225519322 hsa-miR-7106-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6825-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6894-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6510-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6728-5p 1 0 0
chr1:225519198|225519322 hsa-miR-139-3p 1 0 0
chr1:225519198|225519322 hsa-miR-1236-5p 1 0 0
chr1:225519198|225519322 hsa-miR-5187-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6089 1 0 0
chr1:225519198|225519322 hsa-miR-6757-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6873-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6880-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4695-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6746-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6730-5p 1 0 0
chr1:225519198|225519322 hsa-miR-1301-3p 1 0 0
chr1:225519198|225519322 hsa-miR-6890-5p 1 0 0
chr1:225519198|225519322 hsa-miR-3622b-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4655-5p 1 0 0
chr1:225519198|225519322 hsa-miR-197-5p 1 0 0
chr1:225519198|225519322 hsa-miR-7845-5p 1 0 0
chr1:225519198|225519322 hsa-miR-3605-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6716-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6871-5p 1 0 0
chr1:225519198|225519322 hsa-miR-3151-5p 1 0 0
chr1:225519198|225519322 hsa-miR-1292-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6732-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6805-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6827-5p 1 0 0
chr1:225519198|225519322 hsa-miR-3126-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6760-5p 1 0 0
chr1:225519198|225519322 hsa-miR-2467-3p 1 0 0
chr1:225519198|225519322 hsa-miR-6514-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4738-3p 1 0 0
chr1:225519198|225519322 hsa-miR-204-3p 1 0 0
chr1:225519198|225519322 hsa-miR-30c-2-3p 1 0 0
chr1:225519198|225519322 hsa-miR-1228-5p 1 0 0
chr1:225519198|225519322 hsa-miR-92b-5p 1 0 0
chr1:225519198|225519322 hsa-miR-3202 1 0 0
chr1:225519198|225519322 hsa-miR-6834-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4787-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4446-3p 1 0 0
chr1:225519198|225519322 hsa-miR-149-3p 1 0 0
chr1:225519198|225519322 hsa-miR-6830-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6824-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6781-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6878-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6866-5p 1 0 0
chr1:225519198|225519322 hsa-miR-423-5p 1 0 0
chr1:225519198|225519322 hsa-miR-873-3p 1 0 0
chr1:225519198|225519322 hsa-miR-4727-3p 1 0 0
chr1:225519198|225519322 hsa-miR-483-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6761-5p 1 0 0
chr1:225519198|225519322 hsa-miR-1207-5p 1 0 0
chr1:225519198|225519322 hsa-miR-1233-5p 1 0 0
chr1:225519198|225519322 hsa-miR-1273h-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4763-3p 1 0 0
chr1:225519198|225519322 hsa-miR-6778-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6787-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6812-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6870-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6893-5p 1 0 0
chr1:225519198|225519322 hsa-miR-1343-5p 1 0 0
chr1:225519198|225519322 hsa-miR-5001-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6726-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6743-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6754-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6756-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6803-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6813-5p 1 0 0
chr1:225519198|225519322 hsa-miR-10401-5p 1 0 0
chr1:225519198|225519322 hsa-miR-1249-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6751-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6763-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6779-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6780a-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6788-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6797-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6808-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6875-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6879-5p 1 0 0
chr1:225519198|225519322 hsa-miR-7111-5p 1 0 0
chr1:225519198|225519322 hsa-miR-3620-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4728-5p 1 0 0
chr1:225519198|225519322 hsa-miR-5196-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6780b-5p 1 0 0
chr1:225519198|225519322 hsa-miR-10396a-5p 1 0 0
chr1:225519198|225519322 hsa-miR-10396b-5p 1 0 0
chr1:225519198|225519322 hsa-miR-10526-3p 1 0 0
chr1:225519198|225519322 hsa-miR-1237-5p 1 0 0
chr1:225519198|225519322 hsa-miR-3689a-3p 1 0 0
chr1:225519198|225519322 hsa-miR-4632-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4649-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4725-3p 1 0 0
chr1:225519198|225519322 hsa-miR-4726-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4745-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6729-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6735-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6795-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6883-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6887-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4436b-3p 1 0 0
chr1:225519198|225519322 hsa-miR-4723-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6845-5p 1 0 0
chr1:225519198|225519322 hsa-miR-939-5p 1 0 0
chr1:225519198|225519322 hsa-miR-3199 1 0 0
chr1:225519198|225519322 hsa-miR-1238-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4758-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4769-5p 1 0 0
chr1:225519198|225519322 hsa-miR-5586-3p 1 0 0
chr1:225519198|225519322 hsa-miR-6511a-5p 1 0 0
chr1:225519198|225519322 hsa-miR-30c-1-3p 1 0 0
chr1:225519198|225519322 hsa-miR-6731-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6739-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6758-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6856-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4665-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4646-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4747-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6876-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4716-3p 1 0 0
chr1:225519198|225519322 hsa-miR-6750-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6766-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6785-5p 1 0 0
chr1:225519198|225519322 hsa-miR-4667-5p 1 0 0
chr1:225519198|225519322 hsa-miR-3184-5p 1 0 0
chr1:225519198|225519322 hsa-miR-5591-5p 1 0 0
chr1:225519198|225519322 hsa-miR-6822-5p 1 0 0
chr1:225519198|225519322 hsa-miR-320a-3p 1 0 0
chr1:225519198|225519322 hsa-miR-320b 1 0 0
chr1:225519198|225519322 hsa-miR-320c 1 0 0
chr1:225519198|225519322 hsa-miR-6884-5p 1 0 0
chr1:225519198|225519322 hsa-miR-7161-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:225519198|225519322
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MIFCALSPIPAVPFLTALVAPFLASPVPVSPASLVLVFL
Nucleotide Sequence TTGATATTCTGCGCTCTCTCTCCCATTCCAGCTGTTCCCTTTCTAACTGCTCTTGTCGCTCCCTTTCTTGCCTCTCCCGTTCCAGTCTCTCCAGCCTCTCTCGTTCTTGTCTTTCTT
CircID chr1:225519198|225519322
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MRSLSHSSCSLSNCSCRSLSCLSRSSLSSLSRSCLSC
Nucleotide Sequence CTGCGCTCTCTCTCCCATTCCAGCTGTTCCCTTTCTAACTGCTCTTGTCGCTCCCTTTCTTGCCTCTCCCGTTCCAGTCTCTCCAGCCTCTCTCGTTCTTGTCTTTCTTGC
CircID chr1:225519198|225519322
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MERLERERQERERQEQLEREQLEWERERRISSA
Nucleotide Sequence CTGGAGAGACTGGAACGGGAGAGGCAAGAAAGGGAGCGACAAGAGCAGTTAGAAAGGGAACAGCTGGAATGGGAGAGAGAGCGCAGAATATCAAGTGCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab