CircRNA Information

General Information
circRNA Basic Information
CircID chr1:225923725|225924118
Strand +
CircType exon
Host Gene ENSG00000255835.1;
Algorism CIRI2;
Sequence CGCGGACCATGAGCGTGGGCTTCATCGGGGCCGGCCAGCTGGCCTATGCTCTGGCGCGGGGCTTCACGGCCGCAGGCAAGCGCGTGGAGGCGGGAGGCGGCTTCGCGGGCGGTCCCGAGGCCCGAGGGGGCCTCCGTCCCACCAGCATGAGCGAATGAAAGGGGAGTTTGCGTCCGGTGGGGTAGATGAGACTCTGGTTGAGCAGCAAGTGCGTCTTCTGTCCTCGTAGAGGGTTGAGGGGGAGAGGGAGACTGGCACTGTTAGGACGGCTCTGGGTTTTAGAGCCAGGGAAAGCGTGGTAACGGGCTGGGCCGCGACCCCTAGTTGAAAAGCTCTGTCTTCTGCAGGCATCCTGTCGGCTCACAAGATAATAGCCAGCTCCCCAGAAATGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:225923725|225924118 hsa-miR-212-5p 0 0 1
chr1:225923725|225924118 hsa-miR-212-3p 0 0 1
chr1:225923725|225924118 hsa-miR-132-5p 0 0 1
chr1:225923725|225924118 hsa-miR-132-3p 0 0 1
chr1:225923725|225924118 hsa-miR-149-5p 0 0 1
chr1:225923725|225924118 hsa-miR-149-3p 0 0 1
chr1:225923725|225924118 hsa-miR-184 0 0 1
chr1:225923725|225924118 hsa-miR-579-5p 0 0 1
chr1:225923725|225924118 hsa-miR-579-3p 0 0 1
chr1:225923725|225924118 hsa-miR-581 0 0 1
chr1:225923725|225924118 hsa-miR-611 0 0 1
chr1:225923725|225924118 hsa-miR-637 1 0 1
chr1:225923725|225924118 hsa-miR-1298-5p 0 0 1
chr1:225923725|225924118 hsa-miR-1298-3p 0 0 1
chr1:225923725|225924118 hsa-miR-298 1 1 1
chr1:225923725|225924118 hsa-miR-541-5p 0 0 1
chr1:225923725|225924118 hsa-miR-541-3p 0 0 1
chr1:225923725|225924118 hsa-miR-760 0 0 1
chr1:225923725|225924118 hsa-miR-920 0 0 1
chr1:225923725|225924118 hsa-miR-939-5p 0 0 1
chr1:225923725|225924118 hsa-miR-939-3p 0 0 1
chr1:225923725|225924118 hsa-miR-1305 0 0 1
chr1:225923725|225924118 hsa-miR-1281 0 1 1
chr1:225923725|225924118 hsa-miR-654-5p 0 0 1
chr1:225923725|225924118 hsa-miR-1207-3p 0 1 1
chr1:225923725|225924118 hsa-miR-767-3p 1 1 1
chr1:225923725|225924118 hsa-miR-574-3p 0 1 1
chr1:225923725|225924118 hsa-miR-521 0 1 1
chr1:225923725|225924118 hsa-miR-1274a 0 0 1
chr1:225923725|225924118 hsa-miR-1280 0 0 1
chr1:225923725|225924118 hsa-miR-642 0 0 1
chr1:225923725|225924118 hsa-miR-138 0 0 1
chr1:225923725|225924118 hsa-miR-612 1 0 0
chr1:225923725|225924118 hsa-miR-623 1 0 0
chr1:225923725|225924118 hsa-miR-638 1 0 0
chr1:225923725|225924118 hsa-miR-663a 1 0 0
chr1:225923725|225924118 hsa-miR-663b 1 0 0
chr1:225923725|225924118 hsa-miR-1204 1 0 0
chr1:225923725|225924118 hsa-miR-1291 0 1 0
chr1:225923725|225924118 hsa-miR-1275 1 0 0
chr1:225923725|225924118 hsa-miR-1538 1 0 0
chr1:225923725|225924118 hsa-miR-3131 0 1 0
chr1:225923725|225924118 hsa-miR-3181 0 1 0
chr1:225923725|225924118 hsa-miR-4300 0 1 0
chr1:225923725|225924118 hsa-miR-4479 1 0 0
chr1:225923725|225924118 hsa-miR-4487 0 1 0
chr1:225923725|225924118 hsa-miR-5572 1 0 0
chr1:225923725|225924118 hsa-miR-5685 1 0 0
chr1:225923725|225924118 hsa-miR-6860 1 0 0
chr1:225923725|225924118 hsa-miR-7704 0 1 0
chr1:225923725|225924118 hsa-miR-7974 1 1 0
chr1:225923725|225924118 hsa-miR-8089 1 1 0
chr1:225923725|225924118 hsa-miR-11400 0 1 0
chr1:225923725|225924118 hsa-miR-4747-3p 1 0 0
chr1:225923725|225924118 hsa-miR-7155-5p 1 0 0
chr1:225923725|225924118 hsa-miR-4665-3p 1 0 0
chr1:225923725|225924118 hsa-miR-6836-3p 1 0 0
chr1:225923725|225924118 hsa-miR-6861-5p 1 0 0
chr1:225923725|225924118 hsa-miR-6892-3p 1 1 0
chr1:225923725|225924118 hsa-miR-7114-5p 1 0 0
chr1:225923725|225924118 hsa-miR-3064-5p 0 1 0
chr1:225923725|225924118 hsa-miR-7110-3p 0 1 0
chr1:225923725|225924118 hsa-miR-3180-3p 1 0 0
chr1:225923725|225924118 hsa-miR-877-3p 1 0 0
chr1:225923725|225924118 hsa-miR-185-3p 0 1 0
chr1:225923725|225924118 hsa-miR-2467-3p 1 0 0
chr1:225923725|225924118 hsa-miR-6765-3p 1 0 0
chr1:225923725|225924118 hsa-miR-5008-5p 0 1 0
chr1:225923725|225924118 hsa-miR-6850-5p 1 0 0
chr1:225923725|225924118 hsa-miR-6735-3p 1 0 0
chr1:225923725|225924118 hsa-miR-6882-3p 1 0 0
chr1:225923725|225924118 hsa-miR-7109-5p 1 0 0
chr1:225923725|225924118 hsa-miR-4786-3p 1 0 0
chr1:225923725|225924118 hsa-miR-1908-3p 1 0 0
chr1:225923725|225924118 hsa-miR-6803-3p 1 1 0
chr1:225923725|225924118 hsa-miR-7113-3p 1 0 0
chr1:225923725|225924118 hsa-miR-6749-5p 0 1 0
chr1:225923725|225924118 hsa-miR-7111-3p 1 1 0
chr1:225923725|225924118 hsa-miR-6824-5p 1 0 0
chr1:225923725|225924118 hsa-miR-7843-3p 0 1 0
chr1:225923725|225924118 hsa-miR-3158-5p 0 1 0
chr1:225923725|225924118 hsa-miR-1236-3p 0 1 0
chr1:225923725|225924118 hsa-miR-4758-3p 1 0 0
chr1:225923725|225924118 hsa-miR-6867-3p 1 1 0
chr1:225923725|225924118 hsa-miR-6778-3p 0 1 0
chr1:225923725|225924118 hsa-miR-6895-3p 1 0 0
chr1:225923725|225924118 hsa-miR-6746-3p 1 1 0
chr1:225923725|225924118 hsa-miR-5004-5p 0 1 0
chr1:225923725|225924118 hsa-miR-1227-3p 1 0 0
chr1:225923725|225924118 hsa-miR-449c-3p 0 1 0
chr1:225923725|225924118 hsa-miR-3184-3p 0 1 0
chr1:225923725|225924118 hsa-miR-6812-3p 1 0 0
chr1:225923725|225924118 hsa-miR-6847-3p 0 1 0
chr1:225923725|225924118 hsa-miR-642a-5p 0 1 0
chr1:225923725|225924118 hsa-miR-7158-5p 1 0 0
chr1:225923725|225924118 hsa-miR-1343-5p 1 0 0
chr1:225923725|225924118 hsa-miR-6726-5p 1 1 0
chr1:225923725|225924118 hsa-miR-6763-5p 1 1 0
chr1:225923725|225924118 hsa-miR-3127-3p 1 0 0
chr1:225923725|225924118 hsa-miR-328-5p 1 0 0
chr1:225923725|225924118 hsa-miR-4685-5p 1 0 0
chr1:225923725|225924118 hsa-miR-6848-5p 1 0 0
chr1:225923725|225924118 hsa-miR-3187-5p 1 0 0
chr1:225923725|225924118 hsa-miR-1199-5p 1 0 0
chr1:225923725|225924118 hsa-miR-6791-3p 0 1 0
chr1:225923725|225924118 hsa-miR-4700-5p 1 0 0
chr1:225923725|225924118 hsa-miR-4646-5p 1 0 0
chr1:225923725|225924118 hsa-miR-4667-5p 1 1 0
chr1:225923725|225924118 hsa-miR-5591-5p 0 1 0
chr1:225923725|225924118 hsa-miR-550a-5p 0 1 0
chr1:225923725|225924118 hsa-miR-6792-3p 1 0 0
chr1:225923725|225924118 hsa-miR-6805-3p 1 0 0
chr1:225923725|225924118 hsa-miR-10392-3p 1 1 0
chr1:225923725|225924118 hsa-miR-1295b-5p 0 1 0
chr1:225923725|225924118 hsa-miR-10524-5p 0 1 0
chr1:225923725|225924118 hsa-miR-1912-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:225923725|225924118
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MLWRGASRPQASAWRREAASRAVPRPEGASVPPA
Nucleotide Sequence ATGCTCTGGCGCGGGGCTTCACGGCCGCAGGCAAGCGCGTGGAGGCGGGAGGCGGCTTCGCGGGCGGTCCCGAGGCCCGAGGGGGCCTCCGTCCCACCAGCATGA

CircID chr1:225923725|225924118
ORF Type ORF2
Protein Length 49
Nucleotide Length 150
Protein Sequence MSVGFIGAGQLAYALARGFTAAGKRVEAGGGFAGGPEARGGLRPTSMSE
Nucleotide Sequence ATGAGCGTGGGCTTCATCGGGGCCGGCCAGCTGGCCTATGCTCTGGCGCGGGGCTTCACGGCCGCAGGCAAGCGCGTGGAGGCGGGAGGCGGCTTCGCGGGCGGTCCCGAGGCCCGAGGGGGCCTCCGTCCCACCAGCATGAGCGAATGA

CircID chr1:225923725|225924118
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MRLWLSSKCVFCPRRGLRGRGRLALLGRLWVLEPGKAW
Nucleotide Sequence ATGAGACTCTGGTTGAGCAGCAAGTGCGTCTTCTGTCCTCGTAGAGGGTTGAGGGGGAGAGGGAGACTGGCACTGTTAGGACGGCTCTGGGTTTTAGAGCCAGGGAAAGCGTGGTAA

CircID chr1:225923725|225924118
ORF Type ORF4
Protein Length 54
Nucleotide Length 165
Protein Sequence MLLNQSLIYPTGRKLPFHSLMLVGRRPPRASGPPAKPPPASTRLPAAVKPRARA
Nucleotide Sequence TTGCTGCTCAACCAGAGTCTCATCTACCCCACCGGACGCAAACTCCCCTTTCATTCGCTCATGCTGGTGGGACGGAGGCCCCCTCGGGCCTCGGGACCGCCCGCGAAGCCGCCTCCCGCCTCCACGCGCTTGCCTGCGGCCGTGAAGCCCCGCGCCAGAGCATAG

CircID chr1:225923725|225924118
ORF Type ORF5
Protein Length 95
Nucleotide Length 288
Protein Sequence MPAEDRAFQLGVAAQPVTTLSLALKPRAVLTVPVSLSPSTLYEDRRRTCCSTRVSSTPPDANSPFIRSCWWDGGPLGPRDRPRSRLPPPRACLRP
Nucleotide Sequence ATGCCTGCAGAAGACAGAGCTTTTCAACTAGGGGTCGCGGCCCAGCCCGTTACCACGCTTTCCCTGGCTCTAAAACCCAGAGCCGTCCTAACAGTGCCAGTCTCCCTCTCCCCCTCAACCCTCTACGAGGACAGAAGACGCACTTGCTGCTCAACCAGAGTCTCATCTACCCCACCGGACGCAAACTCCCCTTTCATTCGCTCATGCTGGTGGGACGGAGGCCCCCTCGGGCCTCGGGACCGCCCGCGAAGCCGCCTCCCGCCTCCACGCGCTTGCCTGCGGCCGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites