CircNet

General Information

circRNA Basic Information

CircID	chr1:226390492\|226390624
Strand	-
CircType	exon
Host Gene	ENSG00000143799.11;
Algorism	CIRI2;
Sequence	TCGCACTGTACTCGGGCCGGAAACCCAGCTCCTCCCTGTTCTTGACAAAGCAGCCTGGATGGTACCAGCGGTCAATCATGCCTAGCTGTGGCTTCTCCGGGTCCACCATCTTCTTGGACAGGCGCACCTGGCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr1:226390492\|226390624	hsa-miR-629-5p	0	1
chr1:226390492\|226390624	hsa-miR-629-3p	0	1
chr1:226390492\|226390624	hsa-miR-765	0	1
chr1:226390492\|226390624	hsa-miR-708-5p	0	1
chr1:226390492\|226390624	hsa-miR-708-3p	0	1
chr1:226390492\|226390624	hsa-miR-1180-5p	0	1
chr1:226390492\|226390624	hsa-miR-1180-3p	0	1
chr1:226390492\|226390624	hsa-miR-1263	0	1
chr1:226390492\|226390624	hsa-miR-1321	0	1
chr1:226390492\|226390624	hsa-miR-28-5p	0	1
chr1:226390492\|226390624	hsa-miR-661	1	0
chr1:226390492\|226390624	hsa-miR-762	1	0
chr1:226390492\|226390624	hsa-miR-3937	1	0
chr1:226390492\|226390624	hsa-miR-4462	1	0
chr1:226390492\|226390624	hsa-miR-1587	1	0
chr1:226390492\|226390624	hsa-miR-4739	1	0
chr1:226390492\|226390624	hsa-miR-6133	1	0
chr1:226390492\|226390624	hsa-miR-4687-3p	1	0
chr1:226390492\|226390624	hsa-miR-5589-5p	1	0
chr1:226390492\|226390624	hsa-miR-3180-3p	1	0
chr1:226390492\|226390624	hsa-miR-185-3p	1	0
chr1:226390492\|226390624	hsa-miR-6829-5p	1	0
chr1:226390492\|226390624	hsa-miR-6798-5p	1	0
chr1:226390492\|226390624	hsa-miR-6770-5p	1	0
chr1:226390492\|226390624	hsa-miR-4786-3p	1	0
chr1:226390492\|226390624	hsa-miR-6771-5p	1	0
chr1:226390492\|226390624	hsa-miR-3677-3p	1	0
chr1:226390492\|226390624	hsa-miR-149-3p	1	0
chr1:226390492\|226390624	hsa-miR-4763-3p	1	0
chr1:226390492\|226390624	hsa-miR-1343-5p	1	0
chr1:226390492\|226390624	hsa-miR-6726-5p	1	0
chr1:226390492\|226390624	hsa-miR-6743-5p	1	0
chr1:226390492\|226390624	hsa-miR-6756-5p	1	0
chr1:226390492\|226390624	hsa-miR-6813-5p	1	0
chr1:226390492\|226390624	hsa-miR-6815-5p	1	0
chr1:226390492\|226390624	hsa-miR-1249-5p	1	0
chr1:226390492\|226390624	hsa-miR-3620-5p	1	0
chr1:226390492\|226390624	hsa-miR-675-5p	1	0
chr1:226390492\|226390624	hsa-miR-6889-5p	1	0
chr1:226390492\|226390624	hsa-miR-939-5p	1	0
chr1:226390492\|226390624	hsa-miR-10394-3p	1	0
chr1:226390492\|226390624	hsa-miR-3085-5p	1	0
chr1:226390492\|226390624	hsa-miR-10398-3p	1	0
chr1:226390492\|226390624	hsa-miR-6724-5p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:226390492\|226390624
ORF Type	ORF1
Protein Length	26
Nucleotide Length	78
Protein Sequence	MDGTSGQSCLAVASPGPPSSWTGAPG
Nucleotide Sequence	CTGGATGGTACCAGCGGTCAATCATGCCTAGCTGTGGCTTCTCCGGGTCCACCATCTTCTTGGACAGGCGCACCTGGC

CircID	chr1:226390492\|226390624
ORF Type	ORF2
Protein Length	42
Nucleotide Length	126
Protein Sequence	MYSGRKPSSSLFLTKQPGWYQRSIMPSCGFSGSTIFLDRRTW
Nucleotide Sequence	CTGTACTCGGGCCGGAAACCCAGCTCCTCCCTGTTCTTGACAAAGCAGCCTGGATGGTACCAGCGGTCAATCATGCCTAGCTGTGGCTTCTCCGGGTCCACCATCTTCTTGGACAGGCGCACCTGG

CircID	chr1:226390492\|226390624
ORF Type	ORF3
Protein Length	40
Nucleotide Length	120
Protein Sequence	MSKKMVDPEKPQLGMIDRWYHPGCFVKNREELGFRPEYSA
Nucleotide Sequence	CTGTCCAAGAAGATGGTGGACCCGGAGAAGCCACAGCTAGGCATGATTGACCGCTGGTACCATCCAGGCTGCTTTGTCAAGAACAGGGAGGAGCTGGGTTTCCGGCCCGAGTACAGTGCG

CircID	chr1:226390492\|226390624
ORF Type	ORF4
Protein Length	25
Nucleotide Length	75
Protein Sequence	MTAGTIQAALSRTGRSWVSGPSTVR
Nucleotide Sequence	TTGACCGCTGGTACCATCCAGGCTGCTTTGTCAAGAACAGGGAGGAGCTGGGTTTCCGGCCCGAGTACAGTGCGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information