CircRNA Information

General Information
circRNA Basic Information
CircID chr1:22639309|22639486
Strand -
CircType exon
Host Gene ENSG00000173372.15;
Algorism CIRI2;
Sequence CAGGTCTGGGTTGAAAAAGACCCCAAAAAGGGTCACATTTACCAGGGCTCTGAGGCCGACAGCGTCTTCAGCGGCTTCCTCATCTTCCCATCTGCCTGAGCCAGGGAAGGACCCCCTCCCCCACCCACCTCTCTGGCTTCCATGCTCCGCCTGTAAAATGGGGGCGCTATTGCTTCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:22639309|22639486 hsa-miR-149-5p 0 0 1
chr1:22639309|22639486 hsa-miR-149-3p 0 0 1
chr1:22639309|22639486 hsa-miR-504-5p 0 0 1
chr1:22639309|22639486 hsa-miR-504-3p 0 0 1
chr1:22639309|22639486 hsa-miR-625-5p 0 0 1
chr1:22639309|22639486 hsa-miR-625-3p 0 0 1
chr1:22639309|22639486 hsa-miR-1234-3p 0 0 1
chr1:22639309|22639486 hsa-miR-1293 0 0 1
chr1:22639309|22639486 hsa-miR-1305 0 0 1
chr1:22639309|22639486 hsa-miR-1275 0 0 1
chr1:22639309|22639486 hsa-miR-1234 0 0 1
chr1:22639309|22639486 hsa-miR-671-5p 1 0 1
chr1:22639309|22639486 hsa-miR-615-5p 0 0 1
chr1:22639309|22639486 hsa-miR-193a-5p 0 0 1
chr1:22639309|22639486 hsa-miR-1274a 0 0 1
chr1:22639309|22639486 hsa-miR-1233 0 0 1
chr1:22639309|22639486 hsa-miR-24 0 0 1
chr1:22639309|22639486 hsa-miR-663a 1 0 0
chr1:22639309|22639486 hsa-miR-658 1 0 0
chr1:22639309|22639486 hsa-miR-1538 1 0 0
chr1:22639309|22639486 hsa-miR-2110 1 0 0
chr1:22639309|22639486 hsa-miR-3125 1 0 0
chr1:22639309|22639486 hsa-miR-4257 1 0 0
chr1:22639309|22639486 hsa-miR-4253 1 0 0
chr1:22639309|22639486 hsa-miR-4270 1 0 0
chr1:22639309|22639486 hsa-miR-3916 1 0 0
chr1:22639309|22639486 hsa-miR-3937 1 0 0
chr1:22639309|22639486 hsa-miR-4514 1 0 0
chr1:22639309|22639486 hsa-miR-4651 1 0 0
chr1:22639309|22639486 hsa-miR-4656 1 0 0
chr1:22639309|22639486 hsa-miR-4673 1 0 0
chr1:22639309|22639486 hsa-miR-4692 1 0 0
chr1:22639309|22639486 hsa-miR-4730 1 0 0
chr1:22639309|22639486 hsa-miR-4739 1 0 0
chr1:22639309|22639486 hsa-miR-5192 1 0 0
chr1:22639309|22639486 hsa-miR-5194 1 0 0
chr1:22639309|22639486 hsa-miR-5787 1 0 0
chr1:22639309|22639486 hsa-miR-6077 1 0 0
chr1:22639309|22639486 hsa-miR-6081 1 0 0
chr1:22639309|22639486 hsa-miR-6090 1 0 0
chr1:22639309|22639486 hsa-miR-12114 1 0 0
chr1:22639309|22639486 hsa-miR-12115 1 0 0
chr1:22639309|22639486 hsa-miR-4433b-3p 1 0 0
chr1:22639309|22639486 hsa-miR-6765-5p 1 0 0
chr1:22639309|22639486 hsa-miR-7106-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6894-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6854-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6799-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6880-5p 1 0 0
chr1:22639309|22639486 hsa-miR-4722-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6730-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6727-5p 1 0 0
chr1:22639309|22639486 hsa-miR-3622b-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6742-5p 1 0 0
chr1:22639309|22639486 hsa-miR-3605-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6871-5p 1 0 0
chr1:22639309|22639486 hsa-miR-3180-3p 1 0 0
chr1:22639309|22639486 hsa-miR-6748-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6793-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6827-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6798-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6782-5p 1 0 0
chr1:22639309|22639486 hsa-miR-5006-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6786-5p 1 0 0
chr1:22639309|22639486 hsa-miR-4786-3p 1 0 0
chr1:22639309|22639486 hsa-miR-296-3p 1 0 0
chr1:22639309|22639486 hsa-miR-4690-5p 1 0 0
chr1:22639309|22639486 hsa-miR-4732-5p 1 0 0
chr1:22639309|22639486 hsa-miR-7854-3p 1 0 0
chr1:22639309|22639486 hsa-miR-7846-3p 1 0 0
chr1:22639309|22639486 hsa-miR-4750-5p 1 0 0
chr1:22639309|22639486 hsa-miR-490-5p 1 0 0
chr1:22639309|22639486 hsa-miR-4740-3p 1 0 0
chr1:22639309|22639486 hsa-miR-1207-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6769b-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6812-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6865-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6870-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6893-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6775-5p 1 0 0
chr1:22639309|22639486 hsa-miR-3180 1 0 0
chr1:22639309|22639486 hsa-miR-6726-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6737-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6754-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6756-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6769a-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6803-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6815-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6851-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6779-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6780a-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6808-5p 1 0 0
chr1:22639309|22639486 hsa-miR-5196-5p 1 0 0
chr1:22639309|22639486 hsa-miR-10396a-5p 1 0 0
chr1:22639309|22639486 hsa-miR-10396b-5p 1 0 0
chr1:22639309|22639486 hsa-miR-328-5p 1 0 0
chr1:22639309|22639486 hsa-miR-449c-5p 1 0 0
chr1:22639309|22639486 hsa-miR-4649-5p 1 0 0
chr1:22639309|22639486 hsa-miR-4725-3p 1 0 0
chr1:22639309|22639486 hsa-miR-6735-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6831-5p 1 0 0
chr1:22639309|22639486 hsa-miR-939-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6511a-5p 1 0 0
chr1:22639309|22639486 hsa-miR-6511b-5p 1 0 0
chr1:22639309|22639486 hsa-miR-3940-5p 1 0 0
chr1:22639309|22639486 hsa-miR-1914-3p 1 0 0
chr1:22639309|22639486 hsa-miR-4646-5p 1 0 0
chr1:22639309|22639486 hsa-miR-4747-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:22639309|22639486
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence MKKTPKRVTFTRALRPTASSAASSSSHLPEPGKDPLPHPPLWLPCSACKMGALLLQ
Nucleotide Sequence TTGAAAAAGACCCCAAAAAGGGTCACATTTACCAGGGCTCTGAGGCCGACAGCGTCTTCAGCGGCTTCCTCATCTTCCCATCTGCCTGAGCCAGGGAAGGACCCCCTCCCCCACCCACCTCTCTGGCTTCCATGCTCCGCCTGTAAAATGGGGGCGCTATTGCTTCAG
CircID chr1:22639309|22639486
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MSQGRTPSPTHLSGFHAPPVKWGRYCF
Nucleotide Sequence CTGAGCCAGGGAAGGACCCCCTCCCCCACCCACCTCTCTGGCTTCCATGCTCCGCCTGTAAAATGGGGGCGCTATTGCTTC
CircID chr1:22639309|22639486
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MEAREVGGGGGPSLAQADGKMRKPLKTLSASEPW
Nucleotide Sequence ATGGAAGCCAGAGAGGTGGGTGGGGGAGGGGGTCCTTCCCTGGCTCAGGCAGATGGGAAGATGAGGAAGCCGCTGAAGACGCTGTCGGCCTCAGAGCCCTGGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab