CircRNA Information

General Information
circRNA Basic Information
CircID chr1:228249965|228250240
Strand +
CircType exon
Host Gene ENSG00000154358.20;
Algorism find_circ;CIRI2;CIRC
Sequence AGCCCAAGGCGGTGTTTGCAAAGGAGCAGCTGGCACACAGGAAGGTGCAGGCCGAGGCGGGGGCCATTGCCACGCTGAGCTGCGAGGTGGCCCAGGCCCAGACAGAGGTGACGTGGTACAAGGACGGGAAGAAGCTGAGCTCCAGCTCGAAAGTTCGAATGGAGGCTGTGGGCTGCACACGGAGGCTGGTGGTGCAGCAGGCATGCCAGGCGGACACCGGGGAGTATAGCTGCGAGGCCGGGGGCCAGCGGCTCTCCTTCAGCCTGGACGTGGCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:228249965|228250240 hsa-miR-18a-5p 0 0 1
chr1:228249965|228250240 hsa-miR-18a-3p 0 0 1
chr1:228249965|228250240 hsa-miR-22-5p 0 0 1
chr1:228249965|228250240 hsa-miR-22-3p 0 0 1
chr1:228249965|228250240 hsa-miR-107 0 0 1
chr1:228249965|228250240 hsa-miR-205-5p 0 0 1
chr1:228249965|228250240 hsa-miR-205-3p 0 0 1
chr1:228249965|228250240 hsa-miR-214-5p 0 0 1
chr1:228249965|228250240 hsa-miR-214-3p 0 0 1
chr1:228249965|228250240 hsa-miR-18b-5p 0 0 1
chr1:228249965|228250240 hsa-miR-18b-3p 0 0 1
chr1:228249965|228250240 hsa-miR-527 0 0 1
chr1:228249965|228250240 hsa-miR-558 0 0 1
chr1:228249965|228250240 hsa-miR-624-5p 0 0 1
chr1:228249965|228250240 hsa-miR-624-3p 0 0 1
chr1:228249965|228250240 hsa-miR-646 0 1 1
chr1:228249965|228250240 hsa-miR-650 0 0 1
chr1:228249965|228250240 hsa-miR-766-5p 0 0 1
chr1:228249965|228250240 hsa-miR-766-3p 0 0 1
chr1:228249965|228250240 hsa-miR-663b 1 1 1
chr1:228249965|228250240 hsa-miR-1324 0 0 1
chr1:228249965|228250240 hsa-miR-103a-2-5p 0 1 1
chr1:228249965|228250240 hsa-miR-136-5p 0 1 1
chr1:228249965|228250240 hsa-miR-485-5p 0 1 1
chr1:228249965|228250240 hsa-miR-1207-3p 0 0 1
chr1:228249965|228250240 hsa-miR-876-3p 0 0 1
chr1:228249965|228250240 hsa-miR-518a-5p 0 0 1
chr1:228249965|228250240 hsa-miR-450b-5p 0 0 1
chr1:228249965|228250240 hsa-miR-323-5p 0 0 1
chr1:228249965|228250240 hsa-miR-103 0 0 1
chr1:228249965|228250240 hsa-miR-138 0 0 1
chr1:228249965|228250240 hsa-miR-1254 0 0 1
chr1:228249965|228250240 hsa-miR-663 0 0 1
chr1:228249965|228250240 hsa-miR-449a 1 0 0
chr1:228249965|228250240 hsa-miR-608 1 0 0
chr1:228249965|228250240 hsa-miR-637 0 1 0
chr1:228249965|228250240 hsa-miR-762 1 0 0
chr1:228249965|228250240 hsa-miR-761 0 1 0
chr1:228249965|228250240 hsa-miR-1268a 1 0 0
chr1:228249965|228250240 hsa-miR-1321 1 0 0
chr1:228249965|228250240 hsa-miR-1538 1 0 0
chr1:228249965|228250240 hsa-miR-3135a 0 1 0
chr1:228249965|228250240 hsa-miR-3141 1 0 0
chr1:228249965|228250240 hsa-miR-3188 1 0 0
chr1:228249965|228250240 hsa-miR-4317 0 1 0
chr1:228249965|228250240 hsa-miR-4322 1 1 0
chr1:228249965|228250240 hsa-miR-4257 1 0 0
chr1:228249965|228250240 hsa-miR-3937 0 1 0
chr1:228249965|228250240 hsa-miR-1268b 1 0 0
chr1:228249965|228250240 hsa-miR-4443 0 1 0
chr1:228249965|228250240 hsa-miR-4466 1 1 0
chr1:228249965|228250240 hsa-miR-4476 0 1 0
chr1:228249965|228250240 hsa-miR-4487 1 0 0
chr1:228249965|228250240 hsa-miR-4498 1 0 0
chr1:228249965|228250240 hsa-miR-4507 1 0 0
chr1:228249965|228250240 hsa-miR-1587 1 0 0
chr1:228249965|228250240 hsa-miR-4656 1 0 0
chr1:228249965|228250240 hsa-miR-4663 0 1 0
chr1:228249965|228250240 hsa-miR-4674 1 0 0
chr1:228249965|228250240 hsa-miR-4681 0 1 0
chr1:228249965|228250240 hsa-miR-4734 1 1 0
chr1:228249965|228250240 hsa-miR-4737 0 1 0
chr1:228249965|228250240 hsa-miR-4739 1 0 0
chr1:228249965|228250240 hsa-miR-4741 1 0 0
chr1:228249965|228250240 hsa-miR-5090 1 0 0
chr1:228249965|228250240 hsa-miR-5787 1 0 0
chr1:228249965|228250240 hsa-miR-6068 0 1 0
chr1:228249965|228250240 hsa-miR-6075 1 0 0
chr1:228249965|228250240 hsa-miR-6081 1 1 0
chr1:228249965|228250240 hsa-miR-6085 1 0 0
chr1:228249965|228250240 hsa-miR-6133 1 0 0
chr1:228249965|228250240 hsa-miR-6134 1 0 0
chr1:228249965|228250240 hsa-miR-6863 1 1 0
chr1:228249965|228250240 hsa-miR-1843 0 1 0
chr1:228249965|228250240 hsa-miR-12121 0 1 0
chr1:228249965|228250240 hsa-miR-12127 1 0 0
chr1:228249965|228250240 hsa-miR-138-5p 0 1 0
chr1:228249965|228250240 hsa-miR-150-3p 1 1 0
chr1:228249965|228250240 hsa-miR-6809-5p 1 0 0
chr1:228249965|228250240 hsa-miR-4433a-3p 1 0 0
chr1:228249965|228250240 hsa-miR-6765-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6894-5p 1 0 0
chr1:228249965|228250240 hsa-miR-4687-3p 1 0 0
chr1:228249965|228250240 hsa-miR-6799-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6089 1 1 0
chr1:228249965|228250240 hsa-miR-4695-5p 0 1 0
chr1:228249965|228250240 hsa-miR-4755-3p 0 1 0
chr1:228249965|228250240 hsa-miR-7160-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6806-5p 1 1 0
chr1:228249965|228250240 hsa-miR-4655-5p 0 1 0
chr1:228249965|228250240 hsa-miR-6742-5p 1 0 0
chr1:228249965|228250240 hsa-miR-3151-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6768-5p 1 1 0
chr1:228249965|228250240 hsa-miR-6793-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6796-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6829-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6732-5p 1 0 0
chr1:228249965|228250240 hsa-miR-486-3p 1 0 0
chr1:228249965|228250240 hsa-miR-2467-3p 1 0 0
chr1:228249965|228250240 hsa-miR-6782-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6821-5p 1 0 0
chr1:228249965|228250240 hsa-miR-5008-5p 1 0 0
chr1:228249965|228250240 hsa-miR-4640-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6753-5p 1 0 0
chr1:228249965|228250240 hsa-miR-885-3p 1 0 0
chr1:228249965|228250240 hsa-miR-4764-5p 1 0 0
chr1:228249965|228250240 hsa-miR-1908-5p 0 1 0
chr1:228249965|228250240 hsa-miR-4690-5p 0 1 0
chr1:228249965|228250240 hsa-miR-877-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6847-5p 1 0 0
chr1:228249965|228250240 hsa-miR-7854-3p 1 0 0
chr1:228249965|228250240 hsa-miR-149-3p 1 0 0
chr1:228249965|228250240 hsa-miR-6717-5p 1 0 0
chr1:228249965|228250240 hsa-miR-202-3p 1 0 0
chr1:228249965|228250240 hsa-miR-6800-5p 1 0 0
chr1:228249965|228250240 hsa-miR-4715-5p 1 0 0
chr1:228249965|228250240 hsa-miR-4684-3p 1 0 0
chr1:228249965|228250240 hsa-miR-6781-5p 1 1 0
chr1:228249965|228250240 hsa-miR-3191-3p 1 0 0
chr1:228249965|228250240 hsa-miR-3944-5p 0 1 0
chr1:228249965|228250240 hsa-miR-381-5p 0 1 0
chr1:228249965|228250240 hsa-miR-4746-3p 1 0 0
chr1:228249965|228250240 hsa-miR-6741-3p 0 1 0
chr1:228249965|228250240 hsa-miR-181d-3p 0 1 0
chr1:228249965|228250240 hsa-miR-552-3p 1 0 0
chr1:228249965|228250240 hsa-miR-4763-3p 1 0 0
chr1:228249965|228250240 hsa-miR-6787-5p 1 1 0
chr1:228249965|228250240 hsa-miR-6812-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6865-5p 1 1 0
chr1:228249965|228250240 hsa-miR-5001-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6726-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6743-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6752-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6754-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6815-5p 1 1 0
chr1:228249965|228250240 hsa-miR-6819-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6851-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6797-5p 1 0 0
chr1:228249965|228250240 hsa-miR-1915-3p 1 0 0
chr1:228249965|228250240 hsa-miR-3620-5p 1 1 0
chr1:228249965|228250240 hsa-miR-4728-5p 1 0 0
chr1:228249965|228250240 hsa-miR-10396b-5p 0 1 0
chr1:228249965|228250240 hsa-miR-328-5p 1 0 0
chr1:228249965|228250240 hsa-miR-449c-5p 1 0 0
chr1:228249965|228250240 hsa-miR-4632-5p 1 0 0
chr1:228249965|228250240 hsa-miR-4685-5p 1 0 0
chr1:228249965|228250240 hsa-miR-4726-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6777-5p 0 1 0
chr1:228249965|228250240 hsa-miR-6795-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6846-5p 1 1 0
chr1:228249965|228250240 hsa-miR-6848-5p 1 1 0
chr1:228249965|228250240 hsa-miR-6887-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6889-5p 1 1 0
chr1:228249965|228250240 hsa-miR-6845-5p 0 1 0
chr1:228249965|228250240 hsa-miR-939-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6511a-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6511b-5p 0 1 0
chr1:228249965|228250240 hsa-miR-6758-5p 1 0 0
chr1:228249965|228250240 hsa-miR-6876-5p 0 1 0
chr1:228249965|228250240 hsa-miR-3689d 1 0 0
chr1:228249965|228250240 hsa-miR-6762-5p 0 1 0
chr1:228249965|228250240 hsa-miR-10400-3p 1 0 0
chr1:228249965|228250240 hsa-miR-449b-5p 1 0 0
chr1:228249965|228250240 hsa-miR-3619-5p 1 1 0
chr1:228249965|228250240 hsa-miR-381-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:228249965|228250240
ORF Type ORF1
Protein Length 68
Nucleotide Length 204
Protein Sequence MPAAPPASVCSPQPPFELSSWSSASSRPCTTSPLSGPGPPRSSAWQWPPPRPAPSCVPAAPLQTPPWA
Nucleotide Sequence ATGCCTGCTGCACCACCAGCCTCCGTGTGCAGCCCACAGCCTCCATTCGAACTTTCGAGCTGGAGCTCAGCTTCTTCCCGTCCTTGTACCACGTCACCTCTGTCTGGGCCTGGGCCACCTCGCAGCTCAGCGTGGCAATGGCCCCCGCCTCGGCCTGCACCTTCCTGTGTGCCAGCTGCTCCTTTGCAAACACCGCCTTGGGCT

CircID chr1:228249965|228250240
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MEAVGCTRRLVVQQACQADTGEYSCEAGGQRLSFSLDVA
Nucleotide Sequence ATGGAGGCTGTGGGCTGCACACGGAGGCTGGTGGTGCAGCAGGCATGCCAGGCGGACACCGGGGAGTATAGCTGCGAGGCCGGGGGCCAGCGGCTCTCCTTCAGCCTGGACGTGGCA

CircID chr1:228249965|228250240
ORF Type ORF3
Protein Length 72
Nucleotide Length 216
Protein Sequence VSAWHACCTTSLRVQPTASIRTFELELSFFPSLYHVTSVWAWATSQLSVAMAPASACTFLCASCSFANTALG
Nucleotide Sequence GTGTCCGCCTGGCATGCCTGCTGCACCACCAGCCTCCGTGTGCAGCCCACAGCCTCCATTCGAACTTTCGAGCTGGAGCTCAGCTTCTTCCCGTCCTTGTACCACGTCACCTCTGTCTGGGCCTGGGCCACCTCGCAGCTCAGCGTGGCAATGGCCCCCGCCTCGGCCTGCACCTTCCTGTGTGCCAGCTGCTCCTTTGCAAACACCGCCTTGGGC

CircID chr1:228249965|228250240
ORF Type ORF2
Protein Length 82
Nucleotide Length 246
Protein Sequence MAPGLAAILPGVRLACLLHHQPPCAAHSLHSNFRAGAQLLPVLVPRHLCLGLGHLAAQRGNGPRLGLHLPVCQLLLCKHRLG
Nucleotide Sequence CTGGCCCCCGGCCTCGCAGCTATACTCCCCGGTGTCCGCCTGGCATGCCTGCTGCACCACCAGCCTCCGTGTGCAGCCCACAGCCTCCATTCGAACTTTCGAGCTGGAGCTCAGCTTCTTCCCGTCCTTGTACCACGTCACCTCTGTCTGGGCCTGGGCCACCTCGCAGCTCAGCGTGGCAATGGCCCCCGCCTCGGCCTGCACCTTCCTGTGTGCCAGCTGCTCCTTTGCAAACACCGCCTTGGG

CircID chr1:228249965|228250240
ORF Type ORF3
Protein Length 87
Nucleotide Length 261
Protein Sequence MKESRWPPASQLYSPVSAWHACCTTSLRVQPTASIRTFELELSFFPSLYHVTSVWAWATSQLSVAMAPASACTFLCASCSFANTALG
Nucleotide Sequence CTGAAGGAGAGCCGCTGGCCCCCGGCCTCGCAGCTATACTCCCCGGTGTCCGCCTGGCATGCCTGCTGCACCACCAGCCTCCGTGTGCAGCCCACAGCCTCCATTCGAACTTTCGAGCTGGAGCTCAGCTTCTTCCCGTCCTTGTACCACGTCACCTCTGTCTGGGCCTGGGCCACCTCGCAGCTCAGCGTGGCAATGGCCCCCGCCTCGGCCTGCACCTTCCTGTGTGCCAGCTGCTCCTTTGCAAACACCGCCTTGGGC

CircID chr1:228249965|228250240
ORF Type ORF4
Protein Length 37
Nucleotide Length 111
Protein Sequence MWAAHGGWWCSRHARRTPGSIAARPGASGSPSAWTWQ
Nucleotide Sequence CTGTGGGCTGCACACGGAGGCTGGTGGTGCAGCAGGCATGCCAGGCGGACACCGGGGAGTATAGCTGCGAGGCCGGGGGCCAGCGGCTCTCCTTCAGCCTGGACGTGGCAG

CircID chr1:228249965|228250240
ORF Type ORF5
Protein Length 49
Nucleotide Length 150
Protein Sequence MRGGPGPDRGDVVQGREEAELQLESSNGGCGLHTEAGGAAGMPGGHRGV
Nucleotide Sequence CTGCGAGGTGGCCCAGGCCCAGACAGAGGTGACGTGGTACAAGGACGGGAAGAAGCTGAGCTCCAGCTCGAAAGTTCGAATGGAGGCTGTGGGCTGCACACGGAGGCTGGTGGTGCAGCAGGCATGCCAGGCGGACACCGGGGAGTATAG

CircID chr1:228249965|228250240
ORF Type ORF6
Protein Length 82
Nucleotide Length 246
Protein Sequence MAHRKVQAEAGAIATLSCEVAQAQTEVTWYKDGKKLSSSSKVRMEAVGCTRRLVVQQACQADTGEYSCEAGGQRLSFSLDVA
Nucleotide Sequence CTGGCACACAGGAAGGTGCAGGCCGAGGCGGGGGCCATTGCCACGCTGAGCTGCGAGGTGGCCCAGGCCCAGACAGAGGTGACGTGGTACAAGGACGGGAAGAAGCTGAGCTCCAGCTCGAAAGTTCGAATGGAGGCTGTGGGCTGCACACGGAGGCTGGTGGTGCAGCAGGCATGCCAGGCGGACACCGGGGAGTATAGCTGCGAGGCCGGGGGCCAGCGGCTCTCCTTCAGCCTGGACGTGGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr1:228249965|228250240 MOV10 0 1 1
chr1:228249965|228250240 FUS 1 0 0
chr1:228249965|228250240 YTHDF1 0 0 1
chr1:228249965|228250240 TAF15 0 1 0
chr1:228249965|228250240 FMR1 0 2 7
chr1:228249965|228250240 DGCR8 1 0 1
chr1:228249965|228250240 SRSF1 0 0 1
chr1:228249965|228250240 U2AF2 0 1 0
chr1:228249965|228250240 DDX54 0 0 1
chr1:228249965|228250240 LSM11 0 1 0
chr1:228249965|228250240 HNRNPM 0 2 1
chr1:228249965|228250240 PTBP1 1 0 0
chr1:228249965|228250240 HNRNPC 0 1 0
chr1:228249965|228250240 FXR1 0 0 2
chr1:228249965|228250240 FXR2 0 0 4
chr1:228249965|228250240 SND1 0 1 0
chr1:228249965|228250240 IGF2BP2 0 1 0
chr1:228249965|228250240 RBFOX2 1 3 1
chr1:228249965|228250240 SLTM 0 0 1
chr1:228249965|228250240 XRN2 0 1 0
chr1:228249965|228250240 EIF4A3 1 1 2
chr1:228249965|228250240 FBL 0 0 2