CircRNA Information

General Information
circRNA Basic Information
CircID chr1:228377975|228378271
Strand -
CircType exon
Host Gene ENSG00000154358.18;
Algorism CIRI2;
Sequence ATCTGGGCCATCGGTGTGACAGCCTTCATCATGTGAGTCCTCCAACCTGTCTGGGGGTTGCTAGGTGGGCGGGGCAGTCTCCCCCCTCCACCCGAGGGTGACCTCAGGGCCCCTGCACCCCCGTCCACCTGAGGGTGACCTCACGGCCCCTGCACCCTCGTCCACCCGAGGATGACCTCACGGCCCCTGCACCGGCCACCCGAGGGTGACCTCAGTGCTCCTGCATCCCCTCCCCCTCCGCCCTGGTCTACCCAAGGAGGGTGACCTCAGGGCCCGTGCACCCGCCACCTGCGCAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:228377975|228378271 hsa-miR-184 0 0 1
chr1:228377975|228378271 hsa-miR-379-5p 0 0 1
chr1:228377975|228378271 hsa-miR-379-3p 0 0 1
chr1:228377975|228378271 hsa-miR-658 1 1 1
chr1:228377975|228378271 hsa-miR-765 0 0 1
chr1:228377975|228378271 hsa-miR-1228-5p 0 0 1
chr1:228377975|228378271 hsa-miR-1228-3p 0 0 1
chr1:228377975|228378271 hsa-miR-1286 0 0 1
chr1:228377975|228378271 hsa-miR-1291 0 1 1
chr1:228377975|228378271 hsa-miR-1294 0 1 1
chr1:228377975|228378271 hsa-miR-1272 0 1 1
chr1:228377975|228378271 hsa-miR-1324 0 0 1
chr1:228377975|228378271 hsa-miR-125a-3p 0 0 1
chr1:228377975|228378271 hsa-miR-1225-5p 1 0 1
chr1:228377975|228378271 hsa-miR-361-3p 0 0 1
chr1:228377975|228378271 hsa-miR-1224-3p 0 0 1
chr1:228377975|228378271 hsa-miR-324-3p 0 0 1
chr1:228377975|228378271 hsa-miR-342-5p 0 0 1
chr1:228377975|228378271 hsa-miR-125a-5p 0 1 1
chr1:228377975|228378271 hsa-miR-125b 0 0 1
chr1:228377975|228378271 hsa-miR-768-5p 0 0 1
chr1:228377975|228378271 hsa-miR-220a 0 0 1
chr1:228377975|228378271 hsa-miR-886-3p 0 0 1
chr1:228377975|228378271 hsa-miR-663 0 0 1
chr1:228377975|228378271 hsa-miR-663a 1 0 0
chr1:228377975|228378271 hsa-miR-762 1 0 0
chr1:228377975|228378271 hsa-miR-663b 1 0 0
chr1:228377975|228378271 hsa-miR-1268a 1 0 0
chr1:228377975|228378271 hsa-miR-1275 1 0 0
chr1:228377975|228378271 hsa-miR-1913 0 1 0
chr1:228377975|228378271 hsa-miR-3132 1 1 0
chr1:228377975|228378271 hsa-miR-544b 0 1 0
chr1:228377975|228378271 hsa-miR-3141 1 1 0
chr1:228377975|228378271 hsa-miR-3196 1 0 0
chr1:228377975|228378271 hsa-miR-4319 0 1 0
chr1:228377975|228378271 hsa-miR-3665 1 1 0
chr1:228377975|228378271 hsa-miR-3943 1 0 0
chr1:228377975|228378271 hsa-miR-1268b 1 0 0
chr1:228377975|228378271 hsa-miR-2392 1 0 0
chr1:228377975|228378271 hsa-miR-4525 1 0 0
chr1:228377975|228378271 hsa-miR-4651 1 0 0
chr1:228377975|228378271 hsa-miR-4656 1 0 0
chr1:228377975|228378271 hsa-miR-4706 1 0 0
chr1:228377975|228378271 hsa-miR-4721 1 1 0
chr1:228377975|228378271 hsa-miR-4739 1 0 0
chr1:228377975|228378271 hsa-miR-4741 1 0 0
chr1:228377975|228378271 hsa-miR-4784 1 0 0
chr1:228377975|228378271 hsa-miR-5194 1 0 0
chr1:228377975|228378271 hsa-miR-5572 1 0 0
chr1:228377975|228378271 hsa-miR-5698 1 1 0
chr1:228377975|228378271 hsa-miR-5787 1 0 0
chr1:228377975|228378271 hsa-miR-6085 1 1 0
chr1:228377975|228378271 hsa-miR-6745 0 1 0
chr1:228377975|228378271 hsa-miR-7974 1 1 0
chr1:228377975|228378271 hsa-miR-7976 0 1 0
chr1:228377975|228378271 hsa-miR-8072 1 0 0
chr1:228377975|228378271 hsa-miR-9903 0 1 0
chr1:228377975|228378271 hsa-miR-9986 0 1 0
chr1:228377975|228378271 hsa-miR-12114 1 1 0
chr1:228377975|228378271 hsa-miR-12115 0 1 0
chr1:228377975|228378271 hsa-miR-128-1-5p 0 1 0
chr1:228377975|228378271 hsa-miR-668-3p 1 0 0
chr1:228377975|228378271 hsa-miR-6879-3p 0 1 0
chr1:228377975|228378271 hsa-miR-6861-5p 1 0 0
chr1:228377975|228378271 hsa-miR-7106-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6825-5p 1 1 0
chr1:228377975|228378271 hsa-miR-6894-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4687-3p 1 0 0
chr1:228377975|228378271 hsa-miR-6799-5p 1 0 0
chr1:228377975|228378271 hsa-miR-8071 1 1 0
chr1:228377975|228378271 hsa-miR-6804-5p 0 1 0
chr1:228377975|228378271 hsa-miR-4786-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6515-5p 0 1 0
chr1:228377975|228378271 hsa-miR-6089 1 0 0
chr1:228377975|228378271 hsa-miR-6880-5p 1 1 0
chr1:228377975|228378271 hsa-miR-7847-3p 1 1 0
chr1:228377975|228378271 hsa-miR-4722-5p 0 1 0
chr1:228377975|228378271 hsa-miR-6727-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4474-3p 1 0 0
chr1:228377975|228378271 hsa-miR-6721-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4655-5p 1 0 0
chr1:228377975|228378271 hsa-miR-512-3p 1 0 0
chr1:228377975|228378271 hsa-miR-197-5p 1 1 0
chr1:228377975|228378271 hsa-miR-7108-5p 1 0 0
chr1:228377975|228378271 hsa-miR-3180-3p 1 0 0
chr1:228377975|228378271 hsa-miR-6772-5p 1 1 0
chr1:228377975|228378271 hsa-miR-6732-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6805-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6798-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6782-5p 1 0 0
chr1:228377975|228378271 hsa-miR-5006-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6786-5p 1 0 0
chr1:228377975|228378271 hsa-miR-5088-5p 1 0 0
chr1:228377975|228378271 hsa-miR-7109-5p 1 1 0
chr1:228377975|228378271 hsa-miR-1226-5p 1 1 0
chr1:228377975|228378271 hsa-miR-7108-3p 0 1 0
chr1:228377975|228378271 hsa-miR-1229-5p 1 1 0
chr1:228377975|228378271 hsa-miR-6784-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4640-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6753-5p 1 1 0
chr1:228377975|228378271 hsa-miR-296-3p 1 0 0
chr1:228377975|228378271 hsa-miR-92b-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4732-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4717-3p 1 0 0
chr1:228377975|228378271 hsa-miR-6749-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4743-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4787-5p 1 1 0
chr1:228377975|228378271 hsa-miR-149-3p 1 1 0
chr1:228377975|228378271 hsa-miR-6789-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6781-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6877-5p 1 0 0
chr1:228377975|228378271 hsa-miR-5010-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4800-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4776-5p 1 1 0
chr1:228377975|228378271 hsa-miR-3189-3p 1 1 0
chr1:228377975|228378271 hsa-miR-423-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4750-5p 1 0 0
chr1:228377975|228378271 hsa-miR-7848-3p 1 0 0
chr1:228377975|228378271 hsa-miR-6865-3p 0 1 0
chr1:228377975|228378271 hsa-miR-6773-3p 0 1 0
chr1:228377975|228378271 hsa-miR-1199-3p 1 0 0
chr1:228377975|228378271 hsa-miR-5587-5p 0 1 0
chr1:228377975|228378271 hsa-miR-5002-3p 0 1 0
chr1:228377975|228378271 hsa-miR-10400-5p 1 0 0
chr1:228377975|228378271 hsa-miR-1207-5p 0 1 0
chr1:228377975|228378271 hsa-miR-1233-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4763-3p 1 0 0
chr1:228377975|228378271 hsa-miR-6769b-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6778-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6787-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6816-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6865-5p 0 1 0
chr1:228377975|228378271 hsa-miR-6870-5p 1 1 0
chr1:228377975|228378271 hsa-miR-1343-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6743-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6752-5p 1 1 0
chr1:228377975|228378271 hsa-miR-6756-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6803-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6813-5p 0 1 0
chr1:228377975|228378271 hsa-miR-6819-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6851-5p 1 0 0
chr1:228377975|228378271 hsa-miR-7110-5p 1 1 0
chr1:228377975|228378271 hsa-miR-11181-3p 1 0 0
chr1:228377975|228378271 hsa-miR-1249-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6722-3p 1 1 0
chr1:228377975|228378271 hsa-miR-6751-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6779-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6780a-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6797-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6808-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6879-5p 1 0 0
chr1:228377975|228378271 hsa-miR-7111-5p 1 1 0
chr1:228377975|228378271 hsa-miR-1915-3p 1 0 0
chr1:228377975|228378271 hsa-miR-4728-5p 1 1 0
chr1:228377975|228378271 hsa-miR-5196-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6780b-5p 1 0 0
chr1:228377975|228378271 hsa-miR-10396b-5p 1 0 0
chr1:228377975|228378271 hsa-miR-1237-5p 1 0 0
chr1:228377975|228378271 hsa-miR-1909-3p 1 1 0
chr1:228377975|228378271 hsa-miR-328-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4649-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4685-5p 1 1 0
chr1:228377975|228378271 hsa-miR-4725-3p 1 0 0
chr1:228377975|228378271 hsa-miR-6729-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6735-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6738-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6794-5p 1 1 0
chr1:228377975|228378271 hsa-miR-6795-5p 1 1 0
chr1:228377975|228378271 hsa-miR-6846-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6848-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6883-5p 1 1 0
chr1:228377975|228378271 hsa-miR-6887-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4697-5p 1 0 0
chr1:228377975|228378271 hsa-miR-4723-5p 1 1 0
chr1:228377975|228378271 hsa-miR-939-5p 1 0 0
chr1:228377975|228378271 hsa-miR-1914-3p 1 0 0
chr1:228377975|228378271 hsa-miR-377-5p 0 1 0
chr1:228377975|228378271 hsa-miR-4716-3p 1 1 0
chr1:228377975|228378271 hsa-miR-6766-5p 1 0 0
chr1:228377975|228378271 hsa-miR-6785-5p 1 1 0
chr1:228377975|228378271 hsa-miR-3529-5p 0 1 0
chr1:228377975|228378271 hsa-miR-6775-3p 0 1 0
chr1:228377975|228378271 hsa-miR-363-5p 1 1 0
chr1:228377975|228378271 hsa-miR-128-2-5p 0 1 0
chr1:228377975|228378271 hsa-miR-125b-5p 0 1 0
chr1:228377975|228378271 hsa-miR-655-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:228377975|228378271
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MTSRPLHRPPEGDLSAPASPPPPPWSTQGG
Nucleotide Sequence ATGACCTCACGGCCCCTGCACCGGCCACCCGAGGGTGACCTCAGTGCTCCTGCATCCCCTCCCCCTCCGCCCTGGTCTACCCAAGGAGGGTGA
CircID chr1:228377975|228378271
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MHPLPLRPGLPKEGDLRARAPATCA
Nucleotide Sequence CTGCATCCCCTCCCCCTCCGCCCTGGTCTACCCAAGGAGGGTGACCTCAGGGCCCGTGCACCCGCCACCTGCGCA
CircID chr1:228377975|228378271
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence LGHRCDSLHHVSPPTCLGVARWAGQSPPSTRG
Nucleotide Sequence CTGGGCCATCGGTGTGACAGCCTTCATCATGTGAGTCCTCCAACCTGTCTGGGGGTTGCTAGGTGGGCGGGGCAGTCTCCCCCCTCCACCCGAGGGTGA
CircID chr1:228377975|228378271
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MRVTSRPLHPRPPEDDLTAPAPATRG
Nucleotide Sequence CTGAGGGTGACCTCACGGCCCCTGCACCCTCGTCCACCCGAGGATGACCTCACGGCCCCTGCACCGGCCACCCGAGGGTGA
CircID chr1:228377975|228378271
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MRSPSLGRPGRRGRGCRSTEVTLGWPVQGP
Nucleotide Sequence CTGAGGTCACCCTCCTTGGGTAGACCAGGGCGGAGGGGGAGGGGATGCAGGAGCACTGAGGTCACCCTCGGGTGGCCGGTGCAGGGGCCGTGA
CircID chr1:228377975|228378271
ORF Type ORF6
Protein Length 35
Nucleotide Length 105
Protein Sequence MRSPSGGGGRLPRPPSNPQTGWRTHMMKAVTPMAQ
Nucleotide Sequence CTGAGGTCACCCTCGGGTGGAGGGGGGAGACTGCCCCGCCCACCTAGCAACCCCCAGACAGGTTGGAGGACTCACATGATGAAGGCTGTCACACCGATGGCCCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab