CircNet

General Information

circRNA Basic Information

CircID	chr1:228494286\|228494474
Strand	-
CircType	exon
Host Gene	ENSG00000168159.10;
Algorism	CIRI2;
Sequence	CATTGAGTGTCGGATTTGGGGTTAGCATCCAGAAAGAAGAATGCGCATGACGCTCTGTGAAGGCTGGAACTCAGGTCTTCAGGGAGAGAAAGGAAGACTGGATTGCACCTTGATGCCTCCTGAGGAGGCGGCCCCCCTCTTGAGGTGGGCGTGGGCCCGGCCCAGCCTTATCCAAGTCGCTCTGTCCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:228494286\|228494474	hsa-miR-18a-5p	0	0	1
chr1:228494286\|228494474	hsa-miR-18a-3p	0	0	1
chr1:228494286\|228494474	hsa-miR-27a-5p	0	0	1
chr1:228494286\|228494474	hsa-miR-27a-3p	0	0	1
chr1:228494286\|228494474	hsa-miR-27b-5p	0	0	1
chr1:228494286\|228494474	hsa-miR-27b-3p	0	0	1
chr1:228494286\|228494474	hsa-miR-335-5p	0	0	1
chr1:228494286\|228494474	hsa-miR-335-3p	0	0	1
chr1:228494286\|228494474	hsa-miR-18b-5p	0	0	1
chr1:228494286\|228494474	hsa-miR-18b-3p	0	0	1
chr1:228494286\|228494474	hsa-miR-650	0	0	1
chr1:228494286\|228494474	hsa-miR-890	0	1	1
chr1:228494286\|228494474	hsa-miR-1299	0	0	1
chr1:228494286\|228494474	hsa-miR-1261	0	1	1
chr1:228494286\|228494474	hsa-miR-1281	0	1	1
chr1:228494286\|228494474	hsa-miR-1224-3p	0	0	1
chr1:228494286\|228494474	hsa-miR-513a-5p	0	0	1
chr1:228494286\|228494474	hsa-miR-125a-5p	0	0	1
chr1:228494286\|228494474	hsa-miR-125b	0	0	1
chr1:228494286\|228494474	hsa-miR-516b	0	0	1
chr1:228494286\|228494474	hsa-miR-184	0	1	0
chr1:228494286\|228494474	hsa-miR-762	1	1	0
chr1:228494286\|228494474	hsa-miR-3138	0	1	0
chr1:228494286\|228494474	hsa-miR-3612	0	1	0
chr1:228494286\|228494474	hsa-miR-4492	1	0	0
chr1:228494286\|228494474	hsa-miR-4505	0	1	0
chr1:228494286\|228494474	hsa-miR-4538	1	0	0
chr1:228494286\|228494474	hsa-miR-4682	0	1	0
chr1:228494286\|228494474	hsa-miR-6720-5p	0	1	0
chr1:228494286\|228494474	hsa-miR-4695-5p	0	1	0
chr1:228494286\|228494474	hsa-miR-345-3p	0	1	0
chr1:228494286\|228494474	hsa-miR-6830-3p	1	1	0
chr1:228494286\|228494474	hsa-miR-3614-3p	0	1	0
chr1:228494286\|228494474	hsa-miR-5009-3p	0	1	0
chr1:228494286\|228494474	hsa-miR-6756-5p	1	0	0
chr1:228494286\|228494474	hsa-miR-3620-5p	1	0	0
chr1:228494286\|228494474	hsa-miR-328-5p	1	0	0
chr1:228494286\|228494474	hsa-miR-4745-5p	1	0	0
chr1:228494286\|228494474	hsa-miR-1914-3p	1	0	0
chr1:228494286\|228494474	hsa-miR-6829-3p	0	1	0
chr1:228494286\|228494474	hsa-miR-514b-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:228494286\|228494474
ORF Type	ORF1
Protein Length	49
Nucleotide Length	147
Protein Sequence	MRMTLCEGWNSGLQGEKGRLDCTLMPPEEAAPLLRWAWARPSLIQVALS
Nucleotide Sequence	ATGCGCATGACGCTCTGTGAAGGCTGGAACTCAGGTCTTCAGGGAGAGAAAGGAAGACTGGATTGCACCTTGATGCCTCCTGAGGAGGCGGCCCCCCTCTTGAGGTGGGCGTGGGCCCGGCCCAGCCTTATCCAAGTCGCTCTGTCC

CircID	chr1:228494286\|228494474
ORF Type	ORF2
Protein Length	28
Nucleotide Length	87
Protein Sequence	MGRAHAHLKRGAASSGGIKVQSSLPFSP
Nucleotide Sequence	CTGGGCCGGGCCCACGCCCACCTCAAGAGGGGGGCCGCCTCCTCAGGAGGCATCAAGGTGCAATCCAGTCTTCCTTTCTCTCCCTGA

CircID	chr1:228494286\|228494474
ORF Type	ORF3
Protein Length	34
Nucleotide Length	105
Protein Sequence	MDKAGPGPRPPQEGGRLLRRHQGAIQSSFLSLKT
Nucleotide Sequence	TTGGATAAGGCTGGGCCGGGCCCACGCCCACCTCAAGAGGGGGGCCGCCTCCTCAGGAGGCATCAAGGTGCAATCCAGTCTTCCTTTCTCTCCCTGAAGACCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information