CircRNA Information

General Information
circRNA Basic Information
CircID chr1:229268288|229268505
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCAGAGGTCACTGGGCCACTTTACCTTCCACTGTCAAAACTATGTCCATGATCAGATACCTCTGTTGCTAGGGAATATTCAGTCAGAATGGGCTAGATTAACTGCAGTAATGCAGATCTCTCAACCCATTTATGACTTACGCAGCAAAGTTCCTCGCTCAGACTACCTGTCCACTCCCACGAGCAGAGACTTGCTCATGGGCCCTCCTAGACCCAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:229268288|229268505 hsa-miR-17-5p 0 0 1
chr1:229268288|229268505 hsa-miR-17-3p 0 0 1
chr1:229268288|229268505 hsa-miR-20a-5p 0 0 1
chr1:229268288|229268505 hsa-miR-20a-3p 0 0 1
chr1:229268288|229268505 hsa-miR-93-5p 0 0 1
chr1:229268288|229268505 hsa-miR-93-3p 0 0 1
chr1:229268288|229268505 hsa-miR-106a-5p 0 0 1
chr1:229268288|229268505 hsa-miR-106a-3p 0 0 1
chr1:229268288|229268505 hsa-miR-217-5p 0 0 1
chr1:229268288|229268505 hsa-miR-217-3p 0 0 1
chr1:229268288|229268505 hsa-miR-224-5p 0 0 1
chr1:229268288|229268505 hsa-miR-224-3p 0 0 1
chr1:229268288|229268505 hsa-miR-106b-5p 0 0 1
chr1:229268288|229268505 hsa-miR-106b-3p 0 0 1
chr1:229268288|229268505 hsa-miR-345-5p 0 0 1
chr1:229268288|229268505 hsa-miR-345-3p 0 0 1
chr1:229268288|229268505 hsa-miR-196b-5p 0 0 1
chr1:229268288|229268505 hsa-miR-196b-3p 0 0 1
chr1:229268288|229268505 hsa-miR-20b-5p 0 0 1
chr1:229268288|229268505 hsa-miR-20b-3p 0 0 1
chr1:229268288|229268505 hsa-miR-202-5p 0 0 1
chr1:229268288|229268505 hsa-miR-202-3p 0 0 1
chr1:229268288|229268505 hsa-miR-519d-5p 0 0 1
chr1:229268288|229268505 hsa-miR-519d-3p 0 0 1
chr1:229268288|229268505 hsa-miR-522-5p 0 0 1
chr1:229268288|229268505 hsa-miR-522-3p 0 0 1
chr1:229268288|229268505 hsa-miR-593-5p 0 0 1
chr1:229268288|229268505 hsa-miR-593-3p 0 0 1
chr1:229268288|229268505 hsa-miR-601 0 1 1
chr1:229268288|229268505 hsa-miR-663b 0 1 1
chr1:229268288|229268505 hsa-miR-193a-5p 0 0 1
chr1:229268288|229268505 hsa-miR-490-5p 0 0 1
chr1:229268288|229268505 hsa-miR-767-3p 0 0 1
chr1:229268288|229268505 hsa-miR-509-3-5p 0 0 1
chr1:229268288|229268505 hsa-miR-509-5p 0 0 1
chr1:229268288|229268505 hsa-miR-514 0 0 1
chr1:229268288|229268505 hsa-miR-196a 0 0 1
chr1:229268288|229268505 hsa-miR-608 1 0 0
chr1:229268288|229268505 hsa-miR-612 1 0 0
chr1:229268288|229268505 hsa-miR-658 1 0 0
chr1:229268288|229268505 hsa-miR-1231 1 0 0
chr1:229268288|229268505 hsa-miR-1268a 1 0 0
chr1:229268288|229268505 hsa-miR-3138 1 1 0
chr1:229268288|229268505 hsa-miR-1193 1 0 0
chr1:229268288|229268505 hsa-miR-4303 1 1 0
chr1:229268288|229268505 hsa-miR-4270 1 0 0
chr1:229268288|229268505 hsa-miR-1268b 1 0 0
chr1:229268288|229268505 hsa-miR-4439 0 1 0
chr1:229268288|229268505 hsa-miR-4478 1 0 0
chr1:229268288|229268505 hsa-miR-4481 1 0 0
chr1:229268288|229268505 hsa-miR-4486 1 0 0
chr1:229268288|229268505 hsa-miR-4507 0 1 0
chr1:229268288|229268505 hsa-miR-1587 1 0 0
chr1:229268288|229268505 hsa-miR-4641 0 1 0
chr1:229268288|229268505 hsa-miR-4651 1 0 0
chr1:229268288|229268505 hsa-miR-4736 1 0 0
chr1:229268288|229268505 hsa-miR-5572 1 0 0
chr1:229268288|229268505 hsa-miR-6127 1 0 0
chr1:229268288|229268505 hsa-miR-6860 1 0 0
chr1:229268288|229268505 hsa-miR-8073 1 1 0
chr1:229268288|229268505 hsa-miR-8077 1 0 0
chr1:229268288|229268505 hsa-miR-8078 0 1 0
chr1:229268288|229268505 hsa-miR-4433b-3p 1 0 0
chr1:229268288|229268505 hsa-miR-122-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6861-5p 1 0 0
chr1:229268288|229268505 hsa-miR-3692-5p 1 0 0
chr1:229268288|229268505 hsa-miR-3677-5p 0 1 0
chr1:229268288|229268505 hsa-miR-6759-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6732-5p 1 0 0
chr1:229268288|229268505 hsa-miR-3190-3p 1 1 0
chr1:229268288|229268505 hsa-miR-6835-5p 1 0 0
chr1:229268288|229268505 hsa-miR-885-3p 1 0 0
chr1:229268288|229268505 hsa-miR-6847-5p 1 0 0
chr1:229268288|229268505 hsa-miR-7850-5p 1 0 0
chr1:229268288|229268505 hsa-miR-3140-3p 1 0 0
chr1:229268288|229268505 hsa-miR-4796-3p 0 1 0
chr1:229268288|229268505 hsa-miR-1207-5p 1 0 0
chr1:229268288|229268505 hsa-miR-1233-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6778-5p 1 1 0
chr1:229268288|229268505 hsa-miR-6865-5p 1 0 0
chr1:229268288|229268505 hsa-miR-5001-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6752-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6803-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6819-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6842-5p 1 0 0
chr1:229268288|229268505 hsa-miR-7110-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6751-5p 1 1 0
chr1:229268288|229268505 hsa-miR-6779-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6879-5p 1 0 0
chr1:229268288|229268505 hsa-miR-3620-5p 1 0 0
chr1:229268288|229268505 hsa-miR-4728-5p 1 0 0
chr1:229268288|229268505 hsa-miR-4649-5p 1 0 0
chr1:229268288|229268505 hsa-miR-4745-3p 0 1 0
chr1:229268288|229268505 hsa-miR-6729-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6795-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6889-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6831-5p 1 0 0
chr1:229268288|229268505 hsa-miR-4769-5p 1 0 0
chr1:229268288|229268505 hsa-miR-3940-5p 0 1 0
chr1:229268288|229268505 hsa-miR-6856-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6790-5p 1 0 0
chr1:229268288|229268505 hsa-miR-6849-5p 1 1 0
chr1:229268288|229268505 hsa-miR-3529-5p 1 0 0
chr1:229268288|229268505 hsa-miR-3136-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:229268288|229268505
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MTYAAKFLAQTTCPLPRAETCSWALLDP
Nucleotide Sequence ATGACTTACGCAGCAAAGTTCCTCGCTCAGACTACCTGTCCACTCCCACGAGCAGAGACTTGCTCATGGGCCCTCCTAGACCCA

CircID chr1:229268288|229268505
ORF Type ORF2
Protein Length 69
Nucleotide Length 207
Protein Sequence MGHFTFHCQNYVHDQIPLLLGNIQSEWARLTAVMQISQPIYDLRSKVPRSDYLSTPTSRDLLMGPPRPR
Nucleotide Sequence CTGGGCCACTTTACCTTCCACTGTCAAAACTATGTCCATGATCAGATACCTCTGTTGCTAGGGAATATTCAGTCAGAATGGGCTAGATTAACTGCAGTAATGCAGATCTCTCAACCCATTTATGACTTACGCAGCAAAGTTCCTCGCTCAGACTACCTGTCCACTCCCACGAGCAGAGACTTGCTCATGGGCCCTCCTAGACCCAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites