CircRNA Information

General Information
circRNA Basic Information
CircID chr1:229599406|229599601
Strand -
CircType exon
Host Gene ENSG00000135801.8;
Algorism CIRI2;
Sequence CTCACAAAGAAATGCCACACCCATTAGCGGTCACTCTCATTCTCCTTGCCCAGCCCCTGGCAACCACTCCTCTCCTCTCTGTCTCTATGGACTTGCCTATCTGGATATTTCCTATGAAAGGAATAACAGTAGGTGACCTTTTATGACTGGCTTCTTTCACGTAGCATAAAGCTTTCAAGTTCATCCATGTTGCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:229599406|229599601 hsa-miR-452-5p 0 0 1
chr1:229599406|229599601 hsa-miR-452-3p 0 0 1
chr1:229599406|229599601 hsa-miR-376b-5p 0 0 1
chr1:229599406|229599601 hsa-miR-376b-3p 0 0 1
chr1:229599406|229599601 hsa-miR-488-5p 0 0 1
chr1:229599406|229599601 hsa-miR-488-3p 0 0 1
chr1:229599406|229599601 hsa-miR-575 0 0 1
chr1:229599406|229599601 hsa-miR-609 0 0 1
chr1:229599406|229599601 hsa-miR-612 1 1 1
chr1:229599406|229599601 hsa-miR-758-5p 0 0 1
chr1:229599406|229599601 hsa-miR-758-3p 0 0 1
chr1:229599406|229599601 hsa-miR-1202 0 0 1
chr1:229599406|229599601 hsa-miR-1255a 0 0 1
chr1:229599406|229599601 hsa-miR-1256 0 0 1
chr1:229599406|229599601 hsa-miR-140-5p 0 0 1
chr1:229599406|229599601 hsa-miR-490-5p 0 0 1
chr1:229599406|229599601 hsa-miR-491-3p 0 0 1
chr1:229599406|229599601 hsa-miR-1255b 0 0 1
chr1:229599406|229599601 hsa-miR-644 0 0 1
chr1:229599406|229599601 hsa-miR-1285 0 0 1
chr1:229599406|229599601 hsa-miR-376a 0 0 1
chr1:229599406|229599601 hsa-miR-198 1 0 0
chr1:229599406|229599601 hsa-miR-608 1 0 0
chr1:229599406|229599601 hsa-miR-638 1 0 0
chr1:229599406|229599601 hsa-miR-644a 0 1 0
chr1:229599406|229599601 hsa-miR-663a 1 0 0
chr1:229599406|229599601 hsa-miR-762 1 1 0
chr1:229599406|229599601 hsa-miR-765 1 0 0
chr1:229599406|229599601 hsa-miR-1268a 1 0 0
chr1:229599406|229599601 hsa-miR-2861 1 0 0
chr1:229599406|229599601 hsa-miR-3147 1 1 0
chr1:229599406|229599601 hsa-miR-3165 1 0 0
chr1:229599406|229599601 hsa-miR-3185 1 0 0
chr1:229599406|229599601 hsa-miR-4298 1 0 0
chr1:229599406|229599601 hsa-miR-4253 1 0 0
chr1:229599406|229599601 hsa-miR-4270 1 0 0
chr1:229599406|229599601 hsa-miR-3652 1 0 0
chr1:229599406|229599601 hsa-miR-1268b 1 0 0
chr1:229599406|229599601 hsa-miR-378g 1 0 0
chr1:229599406|229599601 hsa-miR-4428 1 0 0
chr1:229599406|229599601 hsa-miR-4430 1 0 0
chr1:229599406|229599601 hsa-miR-4455 1 0 0
chr1:229599406|229599601 hsa-miR-4462 1 0 0
chr1:229599406|229599601 hsa-miR-4486 1 0 0
chr1:229599406|229599601 hsa-miR-4492 1 1 0
chr1:229599406|229599601 hsa-miR-4498 1 1 0
chr1:229599406|229599601 hsa-miR-4499 1 0 0
chr1:229599406|229599601 hsa-miR-4505 1 1 0
chr1:229599406|229599601 hsa-miR-4507 1 0 0
chr1:229599406|229599601 hsa-miR-4508 1 0 0
chr1:229599406|229599601 hsa-miR-4533 1 0 0
chr1:229599406|229599601 hsa-miR-1587 1 0 0
chr1:229599406|229599601 hsa-miR-3974 0 1 0
chr1:229599406|229599601 hsa-miR-3976 0 1 0
chr1:229599406|229599601 hsa-miR-4651 1 0 0
chr1:229599406|229599601 hsa-miR-4656 1 0 0
chr1:229599406|229599601 hsa-miR-4688 1 0 0
chr1:229599406|229599601 hsa-miR-4689 1 0 0
chr1:229599406|229599601 hsa-miR-4706 1 0 0
chr1:229599406|229599601 hsa-miR-4739 1 0 0
chr1:229599406|229599601 hsa-miR-4741 1 0 0
chr1:229599406|229599601 hsa-miR-4784 1 0 0
chr1:229599406|229599601 hsa-miR-5192 1 0 0
chr1:229599406|229599601 hsa-miR-5787 1 1 0
chr1:229599406|229599601 hsa-miR-6085 1 1 0
chr1:229599406|229599601 hsa-miR-6086 1 0 0
chr1:229599406|229599601 hsa-miR-6131 1 0 0
chr1:229599406|229599601 hsa-miR-6133 1 0 0
chr1:229599406|229599601 hsa-miR-6860 1 1 0
chr1:229599406|229599601 hsa-miR-7150 1 0 0
chr1:229599406|229599601 hsa-miR-9900 0 1 0
chr1:229599406|229599601 hsa-miR-12124 0 1 0
chr1:229599406|229599601 hsa-miR-211-3p 1 0 0
chr1:229599406|229599601 hsa-miR-135a-3p 1 0 0
chr1:229599406|229599601 hsa-miR-4433b-3p 1 1 0
chr1:229599406|229599601 hsa-miR-6734-5p 1 0 0
chr1:229599406|229599601 hsa-miR-4731-5p 1 0 0
chr1:229599406|229599601 hsa-miR-504-3p 1 0 0
chr1:229599406|229599601 hsa-miR-6809-5p 1 1 0
chr1:229599406|229599601 hsa-miR-4433a-3p 1 0 0
chr1:229599406|229599601 hsa-miR-7106-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6825-5p 1 1 0
chr1:229599406|229599601 hsa-miR-6894-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6799-5p 1 0 0
chr1:229599406|229599601 hsa-miR-1236-5p 1 1 0
chr1:229599406|229599601 hsa-miR-6757-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6746-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6806-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6759-5p 1 0 0
chr1:229599406|229599601 hsa-miR-8069 1 0 0
chr1:229599406|229599601 hsa-miR-7845-5p 1 1 0
chr1:229599406|229599601 hsa-miR-7108-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6716-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6871-5p 1 0 0
chr1:229599406|229599601 hsa-miR-3180-3p 1 0 0
chr1:229599406|229599601 hsa-miR-185-3p 1 0 0
chr1:229599406|229599601 hsa-miR-6732-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6798-5p 1 0 0
chr1:229599406|229599601 hsa-miR-3126-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6881-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6782-5p 1 0 0
chr1:229599406|229599601 hsa-miR-5006-5p 1 1 0
chr1:229599406|229599601 hsa-miR-6784-5p 1 0 0
chr1:229599406|229599601 hsa-miR-4640-5p 1 0 0
chr1:229599406|229599601 hsa-miR-296-3p 1 0 0
chr1:229599406|229599601 hsa-miR-877-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6501-5p 1 1 0
chr1:229599406|229599601 hsa-miR-3648 1 0 0
chr1:229599406|229599601 hsa-miR-4446-3p 1 0 0
chr1:229599406|229599601 hsa-miR-149-3p 1 0 0
chr1:229599406|229599601 hsa-miR-6824-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6789-5p 1 0 0
chr1:229599406|229599601 hsa-miR-7112-5p 1 0 0
chr1:229599406|229599601 hsa-miR-873-3p 1 0 0
chr1:229599406|229599601 hsa-miR-7113-5p 1 0 0
chr1:229599406|229599601 hsa-miR-1207-5p 1 1 0
chr1:229599406|229599601 hsa-miR-4763-3p 1 0 0
chr1:229599406|229599601 hsa-miR-6787-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6816-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6893-5p 1 0 0
chr1:229599406|229599601 hsa-miR-1343-5p 1 0 0
chr1:229599406|229599601 hsa-miR-5001-5p 1 1 0
chr1:229599406|229599601 hsa-miR-6737-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6743-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6754-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6756-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6769a-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6813-5p 1 1 0
chr1:229599406|229599601 hsa-miR-6819-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6763-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6774-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6779-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6797-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6808-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6879-5p 1 0 0
chr1:229599406|229599601 hsa-miR-3620-5p 1 0 0
chr1:229599406|229599601 hsa-miR-5189-5p 1 1 0
chr1:229599406|229599601 hsa-miR-5196-5p 1 0 0
chr1:229599406|229599601 hsa-miR-10396b-5p 1 0 0
chr1:229599406|229599601 hsa-miR-1237-5p 1 0 0
chr1:229599406|229599601 hsa-miR-1909-3p 1 0 0
chr1:229599406|229599601 hsa-miR-449c-5p 1 0 0
chr1:229599406|229599601 hsa-miR-4649-5p 1 0 0
chr1:229599406|229599601 hsa-miR-4685-5p 1 0 0
chr1:229599406|229599601 hsa-miR-4726-5p 1 0 0
chr1:229599406|229599601 hsa-miR-4745-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6729-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6738-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6846-5p 1 1 0
chr1:229599406|229599601 hsa-miR-6848-5p 1 1 0
chr1:229599406|229599601 hsa-miR-6858-5p 0 1 0
chr1:229599406|229599601 hsa-miR-3187-5p 1 0 0
chr1:229599406|229599601 hsa-miR-5586-3p 0 1 0
chr1:229599406|229599601 hsa-miR-6511a-5p 1 0 0
chr1:229599406|229599601 hsa-miR-6758-5p 1 1 0
chr1:229599406|229599601 hsa-miR-6856-5p 1 1 0
chr1:229599406|229599601 hsa-miR-1285-3p 1 1 0
chr1:229599406|229599601 hsa-miR-6891-5p 1 0 0
chr1:229599406|229599601 hsa-miR-4676-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:229599406|229599601
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MPHPLAVTLILLAQPLATTPLLSVSMDLPIWIFPMKGITVGDLL
Nucleotide Sequence ATGCCACACCCATTAGCGGTCACTCTCATTCTCCTTGCCCAGCCCCTGGCAACCACTCCTCTCCTCTCTGTCTCTATGGACTTGCCTATCTGGATATTTCCTATGAAAGGAATAACAGTAGGTGACCTTTTATGA
CircID chr1:229599406|229599601
ORF Type ORF2
Protein Length 60
Nucleotide Length 183
Protein Sequence MNLKALCYVKEASHKRSPTVIPFIGNIQIGKSIETERRGVVARGWARRMRVTANGCGISL
Nucleotide Sequence ATGAACTTGAAAGCTTTATGCTACGTGAAAGAAGCCAGTCATAAAAGGTCACCTACTGTTATTCCTTTCATAGGAAATATCCAGATAGGCAAGTCCATAGAGACAGAGAGGAGAGGAGTGGTTGCCAGGGGCTGGGCAAGGAGAATGAGAGTGACCGCTAATGGGTGTGGCATTTCTTTGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab