CircNet

General Information

circRNA Basic Information

CircID	chr1:230958224\|230961303
Strand	-
CircType	exon
Host Gene	ENSG00000143643.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGTCATCCTTTTTGAACTTCCATGACTCAGACTGCGAACCCAAGGGATCATCACCCTGTGACTCCTTGCTTTCCCTCAACACTGAGAAGATTCTGAGCCAGGCCAAGTCTATTGCAGAACAGAAGAGATTCCCGTTTGCCACTGATAATGACAGCACAAATGAAGAGTTAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:230958224\|230961303	hsa-miR-181a-2-3p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:230958224\|230961303
ORF Type	ORF1
Protein Length	53
Nucleotide Length	159
Protein Sequence	LNFHDSDCEPKGSSPCDSLLSLNTEKILSQAKSIAEQKRFPFATDNDSTNEEL
Nucleotide Sequence	TTGAACTTCCATGACTCAGACTGCGAACCCAAGGGATCATCACCCTGTGACTCCTTGCTTTCCCTCAACACTGAGAAGATTCTGAGCCAGGCCAAGTCTATTGCAGAACAGAAGAGATTCCCGTTTGCCACTGATAATGACAGCACAAATGAAGAGTTA

CircID	chr1:230958224\|230961303
ORF Type	ORF2
Protein Length	52
Nucleotide Length	156
Protein Sequence	VLSLSVANGNLFCSAIDLAWLRIFSVLRESKESQGDDPLGSQSESWKFKKDD
Nucleotide Sequence	GTGCTGTCATTATCAGTGGCAAACGGGAATCTCTTCTGTTCTGCAATAGACTTGGCCTGGCTCAGAATCTTCTCAGTGTTGAGGGAAAGCAAGGAGTCACAGGGTGATGATCCCTTGGGTTCGCAGTCTGAGTCATGGAAGTTCAAAAAGGATGAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:230958224\|230961303	MSI1	1	0	0
chr1:230958224\|230961303	SRSF7	0	0	1
chr1:230958224\|230961303	U2AF2	6	5	1
chr1:230958224\|230961303	MOV10	0	0	1
chr1:230958224\|230961303	ELAVL1	1	2	0
chr1:230958224\|230961303	U2AF1	1	0	0
chr1:230958224\|230961303	ADAR	2	0	0
chr1:230958224\|230961303	NOP56	1	0	0
chr1:230958224\|230961303	CELF2	0	1	0
chr1:230958224\|230961303	EWSR1	1	0	0
chr1:230958224\|230961303	CNBP	0	1	0
chr1:230958224\|230961303	HNRNPA1	2	1	0
chr1:230958224\|230961303	TIAL1	0	1	0
chr1:230958224\|230961303	PTBP1	0	1	0
chr1:230958224\|230961303	HNRNPC	1	1	0
chr1:230958224\|230961303	TRA2A	0	0	1
chr1:230958224\|230961303	EIF4A3	0	3	3
chr1:230958224\|230961303	FUS	0	2	0

CircRNA Information