CircNet

General Information

circRNA Basic Information

CircID	chr1:231000271\|231000443
Strand	+
CircType	exon
Host Gene	ENSG00000173409.12;
Algorism	CIRI2;
Sequence	CTGGCCTTGTGTATAACGTATAAACCTTCACCTGTTGCATGTCATTCAGTCTCTGCAGCAACATTCCTTGTGTCCATGTGGGTGTTTCTATGTGTGACTGTGAATATCTGTATGTAAATGGCTTGTCTCTTGGGTGCATTTGTGGGGGTGGGTATCCACCGCTATTATCATTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:231000271\|231000443	hsa-miR-27a-5p	0	0	1
chr1:231000271\|231000443	hsa-miR-27a-3p	0	0	1
chr1:231000271\|231000443	hsa-miR-27b-5p	0	0	1
chr1:231000271\|231000443	hsa-miR-27b-3p	0	0	1
chr1:231000271\|231000443	hsa-miR-206	0	0	1
chr1:231000271\|231000443	hsa-miR-376c-5p	0	0	1
chr1:231000271\|231000443	hsa-miR-376c-3p	0	0	1
chr1:231000271\|231000443	hsa-miR-377-5p	0	0	1
chr1:231000271\|231000443	hsa-miR-377-3p	0	0	1
chr1:231000271\|231000443	hsa-miR-493-5p	0	0	1
chr1:231000271\|231000443	hsa-miR-493-3p	0	0	1
chr1:231000271\|231000443	hsa-miR-552-5p	0	0	1
chr1:231000271\|231000443	hsa-miR-552-3p	0	0	1
chr1:231000271\|231000443	hsa-miR-613	0	0	1
chr1:231000271\|231000443	hsa-miR-125a-3p	0	1	1
chr1:231000271\|231000443	hsa-miR-513a-5p	0	0	1
chr1:231000271\|231000443	hsa-miR-409-3p	0	1	1
chr1:231000271\|231000443	hsa-miR-502-3p	1	1	1
chr1:231000271\|231000443	hsa-miR-501-3p	1	1	1
chr1:231000271\|231000443	hsa-miR-105	0	0	1
chr1:231000271\|231000443	hsa-miR-128	0	0	1
chr1:231000271\|231000443	hsa-miR-1	0	0	1
chr1:231000271\|231000443	hsa-miR-665	1	0	0
chr1:231000271\|231000443	hsa-miR-3188	1	0	0
chr1:231000271\|231000443	hsa-miR-4321	1	1	0
chr1:231000271\|231000443	hsa-miR-12114	1	0	0
chr1:231000271\|231000443	hsa-miR-1972	1	0	0
chr1:231000271\|231000443	hsa-miR-6880-5p	1	0	0
chr1:231000271\|231000443	hsa-miR-2467-3p	1	0	0
chr1:231000271\|231000443	hsa-miR-3158-5p	0	1	0
chr1:231000271\|231000443	hsa-miR-3678-3p	0	1	0
chr1:231000271\|231000443	hsa-miR-5189-5p	1	0	0
chr1:231000271\|231000443	hsa-miR-6773-5p	1	0	0
chr1:231000271\|231000443	hsa-miR-4789-3p	0	1	0
chr1:231000271\|231000443	hsa-miR-376b-5p	0	1	0
chr1:231000271\|231000443	hsa-miR-4704-3p	0	1	0
chr1:231000271\|231000443	hsa-miR-494-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:231000271\|231000443
ORF Type	ORF1
Protein Length	38
Nucleotide Length	117
Protein Sequence	LALCITYKPSPVACHSVSAATFLVSMWVFLCVTVNICM
Nucleotide Sequence	CTGGCCTTGTGTATAACGTATAAACCTTCACCTGTTGCATGTCATTCAGTCTCTGCAGCAACATTCCTTGTGTCCATGTGGGTGTTTCTATGTGTGACTGTGAATATCTGTATGTAA

CircID	chr1:231000271\|231000443
ORF Type	ORF2
Protein Length	45
Nucleotide Length	135
Protein Sequence	MSFSLCSNIPCVHVGVSMCDCEYLYVNGLSLGCICGGGYPPLLSL
Nucleotide Sequence	ATGTCATTCAGTCTCTGCAGCAACATTCCTTGTGTCCATGTGGGTGTTTCTATGTGTGACTGTGAATATCTGTATGTAAATGGCTTGTCTCTTGGGTGCATTTGTGGGGGTGGGTATCCACCGCTATTATCATTG

CircID	chr1:231000271\|231000443
ORF Type	ORF3
Protein Length	46
Nucleotide Length	138
Protein Sequence	MHPRDKPFTYRYSQSHIETPTWTQGMLLQRLNDMQQVKVYTLYTRP
Nucleotide Sequence	ATGCACCCAAGAGACAAGCCATTTACATACAGATATTCACAGTCACACATAGAAACACCCACATGGACACAAGGAATGTTGCTGCAGAGACTGAATGACATGCAACAGGTGAAGGTTTATACGTTATACACAAGGCCA

CircID	chr1:231000271\|231000443
ORF Type	ORF4
Protein Length	27
Nucleotide Length	84
Protein Sequence	MIIAVDTHPHKCTQETSHLHTDIHSHT
Nucleotide Sequence	ATGATAATAGCGGTGGATACCCACCCCCACAAATGCACCCAAGAGACAAGCCATTTACATACAGATATTCACAGTCACACATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information