CircRNA Information

General Information
circRNA Basic Information
CircID chr1:233177802|233252788
Strand -
CircType exon
Host Gene ENSG00000135749.18;
Algorism find_circ;CIRI2;DCC;
Sequence ATAACTGTTCCCAGGAAAAAAAGGAGGAAATCCTGGAAAATGAAAAGCCCAGTGGACACAGTTCTAAGCAAGGAAAACCAGATTTGCAAAGTCAAGACCATACTAGCACCGGCCCCGCATGCACTCAGCCTGCCAAGACCACAGCCTTGAACCGTGGAGCATGCAACACATCCCGGCACTGTTTTCGGCCTTCTGTGGCCTCTTGGTCGCCCTTTCTTACCATCTGAGCCGTCAGAGCAGTGACCCATCTGTACTCATGTCCTTCATCCAATGCAGGCTGTTTCCTAAATTTTTACATCAAAATCTGGCAGAGTCAGCTGCTGACCCTCTCCCCAAGAAGATGAAAGATTCAGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:233177802|233252788 hsa-miR-205-5p 0 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr1:233177802|233252788 FBL 0 1 3
chr1:233177802|233252788 SRSF1 0 1 1
chr1:233177802|233252788 ELAVL1 2 2 3
chr1:233177802|233252788 HNRNPC 0 2 0
chr1:233177802|233252788 HNRNPA1 1 0 0
chr1:233177802|233252788 U2AF2 7 2 2
chr1:233177802|233252788 CSTF2T 0 0 1
chr1:233177802|233252788 NOP56 1 0 0
chr1:233177802|233252788 DDX54 0 0 1
chr1:233177802|233252788 RBFOX2 0 1 0
chr1:233177802|233252788 FUS 1 0 0
chr1:233177802|233252788 TARDBP 1 0 0
chr1:233177802|233252788 RBM10 1 1 0
chr1:233177802|233252788 LIN28A 0 0 1
chr1:233177802|233252788 MOV10 1 0 0
chr1:233177802|233252788 IGF2BP3 0 0 1
chr1:233177802|233252788 IGF2BP2 0 0 2
chr1:233177802|233252788 PTBP1 0 1 0
chr1:233177802|233252788 EIF4A3 2 4 6
chr1:233177802|233252788 NOP58 1 2 2