CircNet

General Information

circRNA Basic Information

CircID	chr1:234605392\|234605674
Strand	-
CircType	exon
Host Gene	ENSG00000168264.9;
Algorism	CIRI2;
Sequence	ATGAATTCTCGCACAGTAGTAATAGGTGCACTCATTAAAAACACTACGGAAAAACACTGTATTTGGTGCAGTATCTGATTTTCAAGTGTTAGTAACTTGACCATTAAAAAATAGTTTTGAACAATTTAAAAAGGAAAGACAAACATATAACTAAAAAAGAATCCAAAGTTGGTAAAAATCTGTATTTTCAAATGTAAATAGAAGCTAGGCTGTGAACCATACACATAAATTGTAGACCTTGAAGCCATAATTCAGCCTAATTATAAGGCCAAGTTACAAACAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:234605392\|234605674	hsa-miR-27a-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-27a-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-217-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-217-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-27b-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-27b-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-141-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-141-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-200a-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-200a-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-374a-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-374a-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-135b-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-135b-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-511-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-511-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-584-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-584-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-1323	0	0	1
chr1:234605392\|234605674	hsa-miR-892a	0	0	1
chr1:234605392\|234605674	hsa-miR-374b-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-374b-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-548o-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-548o	0	0	1
chr1:234605392\|234605674	hsa-miR-1283	0	0	1
chr1:234605392\|234605674	hsa-miR-767-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-513a-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-509-3-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-509-5p	0	0	1
chr1:234605392\|234605674	hsa-miR-142-3p	0	0	1
chr1:234605392\|234605674	hsa-miR-135a	0	0	1
chr1:234605392\|234605674	hsa-miR-1259	0	0	1
chr1:234605392\|234605674	hsa-miR-4656	1	0	0
chr1:234605392\|234605674	hsa-miR-12132	0	1	0
chr1:234605392\|234605674	hsa-miR-29b-1-5p	1	0	0
chr1:234605392\|234605674	hsa-miR-493-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:234605392\|234605674
ORF Type	ORF1
Protein Length	25
Nucleotide Length	78
Protein Sequence	MNSRTVVIGALIKNTTEKHCIWCSI
Nucleotide Sequence	ATGAATTCTCGCACAGTAGTAATAGGTGCACTCATTAAAAACACTACGGAAAAACACTGTATTTGGTGCAGTATCTGA

CircID	chr1:234605392\|234605674
ORF Type	ORF2
Protein Length	26
Nucleotide Length	81
Protein Sequence	MNNLKRKDKHITKKESKVGKNLYFQM
Nucleotide Sequence	TTGAACAATTTAAAAAGGAAAGACAAACATATAACTAAAAAAGAATCCAAAGTTGGTAAAAATCTGTATTTTCAAATGTAA

CircID	chr1:234605392\|234605674
ORF Type	ORF3
Protein Length	40
Nucleotide Length	123
Protein Sequence	MASRSTIYVYGSQPSFYLHLKIQIFTNFGFFFSYMFVFPF
Nucleotide Sequence	ATGGCTTCAAGGTCTACAATTTATGTGTATGGTTCACAGCCTAGCTTCTATTTACATTTGAAAATACAGATTTTTACCAACTTTGGATTCTTTTTTAGTTATATGTTTGTCTTTCCTTTTTAA

CircID	chr1:234605392\|234605674
ORF Type	ORF4
Protein Length	34
Nucleotide Length	102
Protein Sequence	MVKLLTLENQILHQIQCFSVVFLMSAPITTVREF
Nucleotide Sequence	ATGGTCAAGTTACTAACACTTGAAAATCAGATACTGCACCAAATACAGTGTTTTTCCGTAGTGTTTTTAATGAGTGCACCTATTACTACTGTGCGAGAATTC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information