CircNet

General Information

circRNA Basic Information

CircID	chr1:235223166\|235231189
Strand	-
CircType	exon
Host Gene	ENSG00000054267.20;
Algorism	find_circ;CIRI2;DCC;
Sequence	TACTTCAGTTCCAAGAAAAGATGTCCATGAAATTACTAGTGACACTGCACCAAAGCCTGATGCTGTTTTAAAGCAAGCCTTTGAACAGGCACTTGAATTTCACAAAAGTAGAACTATTCCTGCTAACTGGAAGACTGAATTGAAAGAAGATAGCTCTAGCAGTGAAGCAGAGGAAGAAGAGGAGGAGGAAGATGATGAAAAAGAAAAGGAGGATAATAGCAGTGAAGAAGAAGAAGAAATAGAACCATTTCCAGAAGAAAGGGAGAACTTTCTTCAGCAATTGTACAAATTTATGGAAGATAGAGGTACACCTATTAACAAACGACCTGTACTTGGATATCGAAATTTGAATCTCTTTAAGTTATTCAGACTTGTACACAAACTTGGAGGATTTGATAAT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:235223166\|235231189	hsa-miR-217-5p	0	1	1
chr1:235223166\|235231189	hsa-miR-217-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:235223166\|235231189
ORF Type	ORF1
Protein Length	87
Nucleotide Length	261
Protein Sequence	LKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLGGFDN
Nucleotide Sequence	TTGAAAGAAGATAGCTCTAGCAGTGAAGCAGAGGAAGAAGAGGAGGAGGAAGATGATGAAAAAGAAAAGGAGGATAATAGCAGTGAAGAAGAAGAAGAAATAGAACCATTTCCAGAAGAAAGGGAGAACTTTCTTCAGCAATTGTACAAATTTATGGAAGATAGAGGTACACCTATTAACAAACGACCTGTACTTGGATATCGAAATTTGAATCTCTTTAAGTTATTCAGACTTGTACACAAACTTGGAGGATTTGATAAT

CircID	chr1:235223166\|235231189
ORF Type	ORF2
Protein Length	31
Nucleotide Length	93
Protein Sequence	MVLFLLLLHCYYPPFLFHHLPPPLLPLLHC*
Nucleotide Sequence	ATGGTTCTATTTCTTCTTCTTCTTCACTGCTATTATCCTCCTTTTCTTTTTCATCATCTTCCTCCTCCTCTTCTTCCTCTGCTTCACTGCTAG

CircID	chr1:235223166\|235231189
ORF Type	ORF3
Protein Length	71
Nucleotide Length	213
Protein Sequence	LLKKVLPFFWKWFYFFFFFTAIILLFFFIIFLLLFFLCFTARAIFFQFSLPVSRNSSTFVKFKCLFKGLL*
Nucleotide Sequence	TTGCTGAAGAAAGTTCTCCCTTTCTTCTGGAAATGGTTCTATTTCTTCTTCTTCTTCACTGCTATTATCCTCCTTTTCTTTTTCATCATCTTCCTCCTCCTCTTCTTCCTCTGCTTCACTGCTAGAGCTATCTTCTTTCAATTCAGTCTTCCAGTTAGCAGGAATAGTTCTACTTTTGTGAAATTCAAGTGCCTGTTCAAAGGCTTGCTTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:235223166\|235231189	U2AF2	11	2	3
chr1:235223166\|235231189	ELAVL1	15	4	3
chr1:235223166\|235231189	DHX9	5	0	0
chr1:235223166\|235231189	CNBP	0	0	1
chr1:235223166\|235231189	UPF1	1	0	0
chr1:235223166\|235231189	FMR1	0	3	1
chr1:235223166\|235231189	CPSF6	0	1	1
chr1:235223166\|235231189	FUS	1	0	0
chr1:235223166\|235231189	CPSF7	1	0	0
chr1:235223166\|235231189	SRSF1	0	2	5
chr1:235223166\|235231189	NOP58	0	4	5
chr1:235223166\|235231189	KHSRP	1	0	0
chr1:235223166\|235231189	NOP56	2	3	1
chr1:235223166\|235231189	DDX54	0	0	11
chr1:235223166\|235231189	RBM10	2	3	0
chr1:235223166\|235231189	HNRNPM	0	1	0
chr1:235223166\|235231189	FIP1L1	1	0	0
chr1:235223166\|235231189	PTBP1	2	13	0
chr1:235223166\|235231189	HNRNPC	27	5	0
chr1:235223166\|235231189	HNRNPD	3	0	0
chr1:235223166\|235231189	TRA2A	0	0	7
chr1:235223166\|235231189	ZNF184	0	0	1
chr1:235223166\|235231189	HNRNPA1	1	0	0
chr1:235223166\|235231189	MSI2	0	0	1
chr1:235223166\|235231189	ACIN1	1	0	5
chr1:235223166\|235231189	LIN28B	2	0	0
chr1:235223166\|235231189	IGF2BP2	2	1	5
chr1:235223166\|235231189	TARDBP	0	1	0
chr1:235223166\|235231189	BUD13	0	0	3
chr1:235223166\|235231189	RBM47	0	1	1
chr1:235223166\|235231189	CSTF2T	0	1	2
chr1:235223166\|235231189	CSTF2	1	0	0
chr1:235223166\|235231189	RBM22	0	1	0
chr1:235223166\|235231189	AGO2	1	0	0
chr1:235223166\|235231189	AGO1	1	0	0
chr1:235223166\|235231189	EIF4A3	1	3	5
chr1:235223166\|235231189	FBL	0	1	2

CircRNA Information