CircNet

General Information

circRNA Basic Information

CircID	chr1:235715201\|235724180
Strand	-
CircType	exon
Host Gene	ENSG00000143669.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	AGCCTTCAGGGAGAGTTGGAACCAGCATCATTTTCCTGGACATATGAAGAAATTAAAGAAGTTCACAAGCGTTGGTGGCAATTGAGAGATAATGCTGTAGAAATCTTTCTAACAAATGGCAGAACACTCCTGTTGGCATTTGATAACACCAAGGTTCGTGATGATGTATACCACAATATACTCACAAATAACCTCCCTAATCTTCTGGAATATGGTAACATCACCGCTCTGACAAATTTATGGTATACTGGGCAAATTACTAATTTTGAATATTTGACTCACTTAAACAAACATGCTGGCCGATCCTTCAATGATCTCATGCAGTATCCTGTGTTCCCATTTATACTTGCTGACTACGTTAGTGAGACACTTGACCTCAATGATCTGTTGATATACAGAAATCTCTCTAAACCTATAGCTGTTCAGTATAAAGAAAAAGAAGATCGTTATGTGGACACATACAAGTACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCAGCCCTATCACTATGGCTCCCACTATTCCAATAGCGGCACTGTGCTTCACTTCCTGGTCAGGATGCCTCCTTTCACTAAAATGTTTTTAGCCTATCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:235715201\|235724180
ORF Type	ORF1
Protein Length	202
Nucleotide Length	606
Protein Sequence	LEPASFSWTYEEIKEVHKRWWQLRDNAVEIFLTNGRTLLLAFDNTKVRDDVYHNILTNNLPNLLEYGNITALTNLWYTGQITNFEYLTHLNKHAGRSFNDLMQYPVFPFILADYVSETLDLNDLLIYRNLSKPIAVQYKEKEDRYVDTYKYLEEEYRKGAREDDPMPPVQPYHYGSHYSNSGTVLHFLVRMPPFTKMFLAYQ
Nucleotide Sequence	TTGGAACCAGCATCATTTTCCTGGACATATGAAGAAATTAAAGAAGTTCACAAGCGTTGGTGGCAATTGAGAGATAATGCTGTAGAAATCTTTCTAACAAATGGCAGAACACTCCTGTTGGCATTTGATAACACCAAGGTTCGTGATGATGTATACCACAATATACTCACAAATAACCTCCCTAATCTTCTGGAATATGGTAACATCACCGCTCTGACAAATTTATGGTATACTGGGCAAATTACTAATTTTGAATATTTGACTCACTTAAACAAACATGCTGGCCGATCCTTCAATGATCTCATGCAGTATCCTGTGTTCCCATTTATACTTGCTGACTACGTTAGTGAGACACTTGACCTCAATGATCTGTTGATATACAGAAATCTCTCTAAACCTATAGCTGTTCAGTATAAAGAAAAAGAAGATCGTTATGTGGACACATACAAGTACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCAGCCCTATCACTATGGCTCCCACTATTCCAATAGCGGCACTGTGCTTCACTTCCTGGTCAGGATGCCTCCTTTCACTAAAATGTTTTTAGCCTATCAA

CircID	chr1:235715201\|235724180
ORF Type	ORF2
Protein Length	55
Nucleotide Length	165
Protein Sequence	MWTHTSTWRKSTAKEPEKMTPCLPCSPITMAPTIPIAALCFTSWSGCLLSLKCF*
Nucleotide Sequence	ATGTGGACACATACAAGTACTTGGAGGAAGAGTACCGCAAAGGAGCCAGAGAAGATGACCCCATGCCTCCCGTGCAGCCCTATCACTATGGCTCCCACTATTCCAATAGCGGCACTGTGCTTCACTTCCTGGTCAGGATGCCTCCTTTCACTAAAATGTTTTTAG

CircID	chr1:235715201\|235724180
ORF Type	ORF3
Protein Length	53
Nucleotide Length	159
Protein Sequence	MLPYSRRLGRLFVSILWYTSSRTLVLSNANRSVLPFVRKISTALSLNCHQRL*
Nucleotide Sequence	ATGTTACCATATTCCAGAAGATTAGGGAGGTTATTTGTGAGTATATTGTGGTATACATCATCACGAACCTTGGTGTTATCAAATGCCAACAGGAGTGTTCTGCCATTTGTTAGAAAGATTTCTACAGCATTATCTCTCAATTGCCACCAACGCTTGTGA

CircID	chr1:235715201\|235724180
ORF Type	ORF4
Protein Length	97
Nucleotide Length	291
Protein Sequence	VKHSAAIGIVGAIVIGLHGRHGVIFSGSFAVLFLQVLVCVHITIFFFFILNSYRFREISVYQQIIEVKCLTNVVSKYKWEHRILHEIIEGSASMFV*
Nucleotide Sequence	GTGAAGCACAGTGCCGCTATTGGAATAGTGGGAGCCATAGTGATAGGGCTGCACGGGAGGCATGGGGTCATCTTCTCTGGCTCCTTTGCGGTACTCTTCCTCCAAGTACTTGTATGTGTCCACATAACGATCTTCTTTTTCTTTATACTGAACAGCTATAGGTTTAGAGAGATTTCTGTATATCAACAGATCATTGAGGTCAAGTGTCTCACTAACGTAGTCAGCAAGTATAAATGGGAACACAGGATACTGCATGAGATCATTGAAGGATCGGCCAGCATGTTTGTTTAA

CircID	chr1:235715201\|235724180
ORF Type	ORF5
Protein Length	39
Nucleotide Length	117
Protein Sequence	MAEHSCWHLITPRFVMMYTTIYSQITSLIFWNMVTSPL*
Nucleotide Sequence	ATGGCAGAACACTCCTGTTGGCATTTGATAACACCAAGGTTCGTGATGATGTATACCACAATATACTCACAAATAACCTCCCTAATCTTCTGGAATATGGTAACATCACCGCTCTGA

CircID	chr1:235715201\|235724180
ORF Type	ORF6
Protein Length	33
Nucleotide Length	99
Protein Sequence	MLADPSMISCSILCSHLYLLTTLVRHLTSMIC*
Nucleotide Sequence	ATGCTGGCCGATCCTTCAATGATCTCATGCAGTATCCTGTGTTCCCATTTATACTTGCTGACTACGTTAGTGAGACACTTGACCTCAATGATCTGTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:235715201\|235724180	ELAVL1	1	0	0
chr1:235715201\|235724180	FBL	0	0	1
chr1:235715201\|235724180	NOP58	0	0	4
chr1:235715201\|235724180	HNRNPD	0	1	0
chr1:235715201\|235724180	MSI2	1	0	0
chr1:235715201\|235724180	U2AF2	1	2	0
chr1:235715201\|235724180	DDX54	0	0	1
chr1:235715201\|235724180	TARDBP	0	1	0
chr1:235715201\|235724180	TAF15	0	1	0
chr1:235715201\|235724180	FMR1	0	0	2
chr1:235715201\|235724180	IGF2BP3	0	0	1
chr1:235715201\|235724180	IGF2BP2	0	0	4
chr1:235715201\|235724180	AGO1	0	0	1
chr1:235715201\|235724180	AGO2	0	0	2
chr1:235715201\|235724180	EIF4A3	0	1	7
chr1:235715201\|235724180	FUS	0	0	1

CircRNA Information