CircRNA Information

General Information
circRNA Basic Information
CircID chr1:24157411|24157653
Strand +
CircType exon
Host Gene ENSG00000185436.10;
Algorism CIRI2;
Sequence CTTCTTTCCTGGGGCAAGAGCACCAGGCTCCAGGGCACTCGGAGGCTGGTGGGGTGGACTCAGGGAGGCCCAGGGCTCCTCTGGTCCCAAGCGAAGGCTCCTCTGCTTGGGATTCTTCAGACAGAAGCTGGGCCAGCACTGTGGACTCCTCCTGGGACAGGGCTGGGTCCTCTGGCTATTTGGCTGAGAAGGGGCCAGGCCAAGGGCCGGGTGGGGATGGGCACCAAGAATCTCTCCCACCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:24157411|24157653 hsa-miR-185-5p 0 0 1
chr1:24157411|24157653 hsa-miR-185-3p 0 0 1
chr1:24157411|24157653 hsa-miR-575 0 0 1
chr1:24157411|24157653 hsa-miR-765 0 0 1
chr1:24157411|24157653 hsa-miR-874-5p 0 0 1
chr1:24157411|24157653 hsa-miR-874-3p 0 0 1
chr1:24157411|24157653 hsa-miR-541-5p 0 0 1
chr1:24157411|24157653 hsa-miR-541-3p 0 0 1
chr1:24157411|24157653 hsa-miR-665 0 0 1
chr1:24157411|24157653 hsa-miR-1226-5p 0 0 1
chr1:24157411|24157653 hsa-miR-1226-3p 0 0 1
chr1:24157411|24157653 hsa-miR-512-3p 0 1 1
chr1:24157411|24157653 hsa-miR-146b-3p 0 0 1
chr1:24157411|24157653 hsa-miR-941 0 1 1
chr1:24157411|24157653 hsa-miR-339-5p 1 1 1
chr1:24157411|24157653 hsa-miR-1289 0 0 1
chr1:24157411|24157653 hsa-miR-654-5p 0 0 1
chr1:24157411|24157653 hsa-miR-125a-5p 0 1 1
chr1:24157411|24157653 hsa-miR-1302 0 0 1
chr1:24157411|24157653 hsa-miR-1233 0 0 1
chr1:24157411|24157653 hsa-miR-128 0 0 1
chr1:24157411|24157653 hsa-miR-125b 0 0 1
chr1:24157411|24157653 hsa-miR-1538 1 0 0
chr1:24157411|24157653 hsa-miR-718 1 0 0
chr1:24157411|24157653 hsa-miR-3122 0 1 0
chr1:24157411|24157653 hsa-miR-4308 0 1 0
chr1:24157411|24157653 hsa-miR-4292 0 1 0
chr1:24157411|24157653 hsa-miR-3921 0 1 0
chr1:24157411|24157653 hsa-miR-4449 1 0 0
chr1:24157411|24157653 hsa-miR-4682 1 0 0
chr1:24157411|24157653 hsa-miR-4730 1 0 0
chr1:24157411|24157653 hsa-miR-4739 1 0 0
chr1:24157411|24157653 hsa-miR-4751 0 1 0
chr1:24157411|24157653 hsa-miR-3157-5p 0 1 0
chr1:24157411|24157653 hsa-miR-212-5p 0 1 0
chr1:24157411|24157653 hsa-miR-6894-5p 1 0 0
chr1:24157411|24157653 hsa-miR-1233-3p 0 1 0
chr1:24157411|24157653 hsa-miR-766-5p 1 0 0
chr1:24157411|24157653 hsa-miR-6849-3p 0 1 0
chr1:24157411|24157653 hsa-miR-6732-5p 1 0 0
chr1:24157411|24157653 hsa-miR-615-5p 0 1 0
chr1:24157411|24157653 hsa-miR-939-3p 1 1 0
chr1:24157411|24157653 hsa-miR-1909-5p 0 1 0
chr1:24157411|24157653 hsa-miR-7113-3p 0 1 0
chr1:24157411|24157653 hsa-miR-6847-5p 0 1 0
chr1:24157411|24157653 hsa-miR-149-3p 1 0 0
chr1:24157411|24157653 hsa-miR-6870-3p 0 1 0
chr1:24157411|24157653 hsa-miR-6778-3p 0 1 0
chr1:24157411|24157653 hsa-miR-216a-3p 0 1 0
chr1:24157411|24157653 hsa-miR-1914-5p 1 0 0
chr1:24157411|24157653 hsa-miR-4746-5p 1 0 0
chr1:24157411|24157653 hsa-miR-6851-3p 0 1 0
chr1:24157411|24157653 hsa-miR-6779-3p 0 1 0
chr1:24157411|24157653 hsa-miR-670-5p 0 1 0
chr1:24157411|24157653 hsa-miR-6729-3p 0 1 0
chr1:24157411|24157653 hsa-miR-6888-3p 0 1 0
chr1:24157411|24157653 hsa-miR-1233-5p 1 0 0
chr1:24157411|24157653 hsa-miR-6769a-5p 1 0 0
chr1:24157411|24157653 hsa-miR-1249-5p 1 0 0
chr1:24157411|24157653 hsa-miR-6751-5p 1 0 0
chr1:24157411|24157653 hsa-miR-6779-5p 1 0 0
chr1:24157411|24157653 hsa-miR-3127-3p 0 1 0
chr1:24157411|24157653 hsa-miR-4726-5p 0 1 0
chr1:24157411|24157653 hsa-miR-6777-5p 1 0 0
chr1:24157411|24157653 hsa-miR-939-5p 0 1 0
chr1:24157411|24157653 hsa-miR-30c-1-3p 1 1 0
chr1:24157411|24157653 hsa-miR-4747-5p 1 0 0
chr1:24157411|24157653 hsa-miR-6766-5p 0 1 0
chr1:24157411|24157653 hsa-miR-6791-5p 0 1 0
chr1:24157411|24157653 hsa-miR-769-3p 0 1 0
chr1:24157411|24157653 hsa-miR-6862-3p 0 1 0
chr1:24157411|24157653 hsa-miR-6775-3p 1 0 0
chr1:24157411|24157653 hsa-miR-10392-3p 1 0 0
chr1:24157411|24157653 hsa-miR-4723-3p 0 1 0
chr1:24157411|24157653 hsa-miR-6744-3p 0 1 0
chr1:24157411|24157653 hsa-miR-6783-3p 0 1 0
chr1:24157411|24157653 hsa-miR-125b-5p 0 1 0
chr1:24157411|24157653 hsa-miR-3681-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:24157411|24157653
ORF Type ORF1
Protein Length 66
Nucleotide Length 198
Protein Sequence MVGWTQGGPGLLWSQAKAPLLGILQTEAGPALWTPPGTGLGPLAIWLRRGQAKGRVGMGTKNLSHH
Nucleotide Sequence CTGGTGGGGTGGACTCAGGGAGGCCCAGGGCTCCTCTGGTCCCAAGCGAAGGCTCCTCTGCTTGGGATTCTTCAGACAGAAGCTGGGCCAGCACTGTGGACTCCTCCTGGGACAGGGCTGGGTCCTCTGGCTATTTGGCTGAGAAGGGGCCAGGCCAAGGGCCGGGTGGGGATGGGCACCAAGAATCTCTCCCACCAC
CircID chr1:24157411|24157653
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MGFFRQKLGQHCGLLLGQGWVLWLFG
Nucleotide Sequence TTGGGATTCTTCAGACAGAAGCTGGGCCAGCACTGTGGACTCCTCCTGGGACAGGGCTGGGTCCTCTGGCTATTTGGCTGA
CircID chr1:24157411|24157653
ORF Type ORF3
Protein Length 78
Nucleotide Length 234
Protein Sequence MGQEHQAPGHSEAGGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSWDRAGSSGYLAEKGPGQGPGGDGHQESLPP
Nucleotide Sequence CTGGGGCAAGAGCACCAGGCTCCAGGGCACTCGGAGGCTGGTGGGGTGGACTCAGGGAGGCCCAGGGCTCCTCTGGTCCCAAGCGAAGGCTCCTCTGCTTGGGATTCTTCAGACAGAAGCTGGGCCAGCACTGTGGACTCCTCCTGGGACAGGGCTGGGTCCTCTGGCTATTTGGCTGAGAAGGGGCCAGGCCAAGGGCCGGGTGGGGATGGGCACCAAGAATCTCTCCCACCA
CircID chr1:24157411|24157653
ORF Type ORF4
Protein Length 66
Nucleotide Length 198
Protein Sequence MAPSQPNSQRTQPCPRRSPQCWPSFCLKNPKQRSLRLGPEEPWASLSPPHQPPSALEPGALAPGKK
Nucleotide Sequence CTGGCCCCTTCTCAGCCAAATAGCCAGAGGACCCAGCCCTGTCCCAGGAGGAGTCCACAGTGCTGGCCCAGCTTCTGTCTGAAGAATCCCAAGCAGAGGAGCCTTCGCTTGGGACCAGAGGAGCCCTGGGCCTCCCTGAGTCCACCCCACCAGCCTCCGAGTGCCCTGGAGCCTGGTGCTCTTGCCCCAGGAAAGAAG
CircID chr1:24157411|24157653
ORF Type ORF5
Protein Length 36
Nucleotide Length 111
Protein Sequence MVPIPTRPLAWPLLSQIARGPSPVPGGVHSAGPASV
Nucleotide Sequence TTGGTGCCCATCCCCACCCGGCCCTTGGCCTGGCCCCTTCTCAGCCAAATAGCCAGAGGACCCAGCCCTGTCCCAGGAGGAGTCCACAGTGCTGGCCCAGCTTCTGTCTGA
CircID chr1:24157411|24157653
ORF Type ORF6
Protein Length 53
Nucleotide Length 159
Protein Sequence MSQEESTVLAQLLSEESQAEEPSLGTRGALGLPESTPPASECPGAWCSCPRKE
Nucleotide Sequence CTGTCCCAGGAGGAGTCCACAGTGCTGGCCCAGCTTCTGTCTGAAGAATCCCAAGCAGAGGAGCCTTCGCTTGGGACCAGAGGAGCCCTGGGCCTCCCTGAGTCCACCCCACCAGCCTCCGAGTGCCCTGGAGCCTGGTGCTCTTGCCCCAGGAAAGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab