CircNet

General Information

circRNA Basic Information

CircID	chr1:244440610\|244440800
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CAAGTGGCACAGAACTATGCACAGTAAAATGTGAAGCCTTTCTCATACCCTTGCTGTAAGACAACCAGTTAGCACAAGTTTTTGGTCCTTCCTGAGGTGATTTATGCATATAAAACATATATACTGTTTTATTTTACATATACAATGGTAGCAAACTATATACATGTGGGCAGCTTGCGTACTTCCATAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:244440610\|244440800	hsa-miR-22-5p	0	0	1
chr1:244440610\|244440800	hsa-miR-22-3p	0	0	1
chr1:244440610\|244440800	hsa-miR-23a-5p	0	0	1
chr1:244440610\|244440800	hsa-miR-23a-3p	0	0	1
chr1:244440610\|244440800	hsa-miR-23b-5p	0	0	1
chr1:244440610\|244440800	hsa-miR-23b-3p	0	0	1
chr1:244440610\|244440800	hsa-miR-144-5p	0	0	1
chr1:244440610\|244440800	hsa-miR-144-3p	0	0	1
chr1:244440610\|244440800	hsa-miR-380-5p	0	0	1
chr1:244440610\|244440800	hsa-miR-380-3p	0	0	1
chr1:244440610\|244440800	hsa-miR-511-5p	0	0	1
chr1:244440610\|244440800	hsa-miR-511-3p	0	0	1
chr1:244440610\|244440800	hsa-miR-539-5p	0	0	1
chr1:244440610\|244440800	hsa-miR-539-3p	0	0	1
chr1:244440610\|244440800	hsa-miR-568	0	0	1
chr1:244440610\|244440800	hsa-miR-586	0	0	1
chr1:244440610\|244440800	hsa-miR-600	0	0	1
chr1:244440610\|244440800	hsa-miR-892a	0	0	1
chr1:244440610\|244440800	hsa-miR-873-5p	0	0	1
chr1:244440610\|244440800	hsa-miR-873-3p	0	0	1
chr1:244440610\|244440800	hsa-miR-1227-5p	0	0	1
chr1:244440610\|244440800	hsa-miR-1227-3p	0	0	1
chr1:244440610\|244440800	hsa-miR-582-3p	0	0	1
chr1:244440610\|244440800	hsa-miR-153	0	0	1
chr1:244440610\|244440800	hsa-miR-218	0	0	1
chr1:244440610\|244440800	hsa-miR-453	0	0	1
chr1:244440610\|244440800	hsa-miR-1259	0	0	1
chr1:244440610\|244440800	hsa-miR-346	1	0	0
chr1:244440610\|244440800	hsa-miR-3924	0	1	0
chr1:244440610\|244440800	hsa-miR-4476	0	1	0
chr1:244440610\|244440800	hsa-miR-4518	1	1	0
chr1:244440610\|244440800	hsa-miR-8080	1	0	0
chr1:244440610\|244440800	hsa-miR-6510-5p	1	1	0
chr1:244440610\|244440800	hsa-miR-3202	0	1	0
chr1:244440610\|244440800	hsa-miR-3120-3p	1	1	0
chr1:244440610\|244440800	hsa-miR-188-3p	1	0	0
chr1:244440610\|244440800	hsa-miR-5585-5p	0	1	0
chr1:244440610\|244440800	hsa-miR-4693-5p	0	1	0
chr1:244440610\|244440800	hsa-miR-6858-5p	1	0	0
chr1:244440610\|244440800	hsa-miR-6876-5p	0	1	0
chr1:244440610\|244440800	hsa-miR-7157-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:244440610\|244440800
ORF Type	ORF1
Protein Length	36
Nucleotide Length	108
Protein Sequence	MVLPEVIYAYKTYILFYFTYTMVANYIHVGSLRTSI
Nucleotide Sequence	TTGGTCCTTCCTGAGGTGATTTATGCATATAAAACATATATACTGTTTTATTTTACATATACAATGGTAGCAAACTATATACATGTGGGCAGCTTGCGTACTTCCATA

CircID	chr1:244440610\|244440800
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MFYMHKSPQEGPKTCANWLSYSKGMRKASHFTVHSSVPL
Nucleotide Sequence	ATGTTTTATATGCATAAATCACCTCAGGAAGGACCAAAAACTTGTGCTAACTGGTTGTCTTACAGCAAGGGTATGAGAAAGGCTTCACATTTTACTGTGCATAGTTCTGTGCCACTT

CircID	chr1:244440610\|244440800
ORF Type	ORF3
Protein Length	40
Nucleotide Length	123
Protein Sequence	MYIVCYHCICKIKQYICFICINHLRKDQKLVLTGCLTARV
Nucleotide Sequence	ATGTATATAGTTTGCTACCATTGTATATGTAAAATAAAACAGTATATATGTTTTATATGCATAAATCACCTCAGGAAGGACCAAAAACTTGTGCTAACTGGTTGTCTTACAGCAAGGGTATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information