CircRNA Information

General Information
circRNA Basic Information
CircID chr1:24471766|24472071
Strand +
CircType exon
Host Gene ENSG00000001461.15;
Algorism CIRI2;
Sequence TCATCTCAAGAAAGCTGGCTGGCCCAAGCCTAAAAGGCCCATACCAAAAAAAAAAAAAAAAAAGGGAAGGAAGGGGGCAGAGTAAGTTTGGGAGCATATATATGCCCAAATTATTAATGATCACCCGGGTTTGACACATCTAAATAGCCTCCCTGCTCACCTTCTGTTTCTCCCTCCTGCCTCCACTCCCAGCTTTAGAAAAATCATTTGGGAAAGGAGAAATATATAAATAGCAGTGAAACCTGATTTTAATTTCTGCTTTTTGTTTTTTGTTCTTGCAGGCTCGGAGAAGGTAACTTATTCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:24471766|24472071 hsa-miR-204-5p 0 0 1
chr1:24471766|24472071 hsa-miR-204-3p 0 0 1
chr1:24471766|24472071 hsa-miR-211-5p 0 0 1
chr1:24471766|24472071 hsa-miR-211-3p 0 0 1
chr1:24471766|24472071 hsa-miR-143-5p 0 0 1
chr1:24471766|24472071 hsa-miR-143-3p 0 0 1
chr1:24471766|24472071 hsa-miR-150-5p 0 0 1
chr1:24471766|24472071 hsa-miR-150-3p 0 0 1
chr1:24471766|24472071 hsa-miR-320a-5p 0 0 1
chr1:24471766|24472071 hsa-miR-320a-3p 0 0 1
chr1:24471766|24472071 hsa-miR-526b-5p 0 0 1
chr1:24471766|24472071 hsa-miR-526b-3p 0 0 1
chr1:24471766|24472071 hsa-miR-578 0 0 1
chr1:24471766|24472071 hsa-miR-592 0 0 1
chr1:24471766|24472071 hsa-miR-596 0 0 1
chr1:24471766|24472071 hsa-miR-597-5p 0 0 1
chr1:24471766|24472071 hsa-miR-597-3p 0 0 1
chr1:24471766|24472071 hsa-miR-623 1 0 1
chr1:24471766|24472071 hsa-miR-635 0 0 1
chr1:24471766|24472071 hsa-miR-650 0 0 1
chr1:24471766|24472071 hsa-miR-940 0 0 1
chr1:24471766|24472071 hsa-miR-1321 0 0 1
chr1:24471766|24472071 hsa-miR-1827 0 0 1
chr1:24471766|24472071 hsa-miR-129-5p 0 0 1
chr1:24471766|24472071 hsa-miR-615-3p 0 0 1
chr1:24471766|24472071 hsa-miR-576-3p 0 0 1
chr1:24471766|24472071 hsa-miR-576-5p 0 0 1
chr1:24471766|24472071 hsa-miR-324-3p 0 0 1
chr1:24471766|24472071 hsa-miR-320b 1 0 1
chr1:24471766|24472071 hsa-miR-320c 0 0 1
chr1:24471766|24472071 hsa-miR-320d 0 0 1
chr1:24471766|24472071 hsa-miR-608 1 0 0
chr1:24471766|24472071 hsa-miR-765 1 0 0
chr1:24471766|24472071 hsa-miR-298 1 0 0
chr1:24471766|24472071 hsa-miR-933 1 0 0
chr1:24471766|24472071 hsa-miR-1268a 1 0 0
chr1:24471766|24472071 hsa-miR-1913 1 0 0
chr1:24471766|24472071 hsa-miR-3147 1 0 0
chr1:24471766|24472071 hsa-miR-3154 1 0 0
chr1:24471766|24472071 hsa-miR-3188 1 0 0
chr1:24471766|24472071 hsa-miR-4293 1 0 0
chr1:24471766|24472071 hsa-miR-4259 1 0 0
chr1:24471766|24472071 hsa-miR-4270 1 0 0
chr1:24471766|24472071 hsa-miR-1268b 1 0 0
chr1:24471766|24472071 hsa-miR-4429 1 0 0
chr1:24471766|24472071 hsa-miR-4462 1 0 0
chr1:24471766|24472071 hsa-miR-2392 1 0 0
chr1:24471766|24472071 hsa-miR-4706 1 0 0
chr1:24471766|24472071 hsa-miR-4739 1 0 0
chr1:24471766|24472071 hsa-miR-4779 1 0 0
chr1:24471766|24472071 hsa-miR-5787 1 0 0
chr1:24471766|24472071 hsa-miR-6090 1 0 0
chr1:24471766|24472071 hsa-miR-6125 1 0 0
chr1:24471766|24472071 hsa-miR-6127 1 0 0
chr1:24471766|24472071 hsa-miR-6133 1 0 0
chr1:24471766|24472071 hsa-miR-6165 1 0 0
chr1:24471766|24472071 hsa-miR-6860 1 0 0
chr1:24471766|24472071 hsa-miR-8085 1 0 0
chr1:24471766|24472071 hsa-miR-9898 1 0 0
chr1:24471766|24472071 hsa-miR-4433b-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6749-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6765-5p 1 0 0
chr1:24471766|24472071 hsa-miR-7106-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6799-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6804-5p 1 0 0
chr1:24471766|24472071 hsa-miR-7851-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6089 1 0 0
chr1:24471766|24472071 hsa-miR-7847-3p 1 0 0
chr1:24471766|24472071 hsa-miR-4695-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6746-5p 1 0 0
chr1:24471766|24472071 hsa-miR-4722-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6727-5p 1 0 0
chr1:24471766|24472071 hsa-miR-1915-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6716-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6871-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6732-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6798-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6760-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6782-5p 1 0 0
chr1:24471766|24472071 hsa-miR-5001-3p 1 0 0
chr1:24471766|24472071 hsa-miR-3667-3p 1 0 0
chr1:24471766|24472071 hsa-miR-4690-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6878-3p 1 0 0
chr1:24471766|24472071 hsa-miR-4787-5p 1 0 0
chr1:24471766|24472071 hsa-miR-149-3p 1 0 0
chr1:24471766|24472071 hsa-miR-3162-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6878-5p 1 0 0
chr1:24471766|24472071 hsa-miR-7112-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6889-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6720-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6828-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6752-3p 1 0 0
chr1:24471766|24472071 hsa-miR-2114-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6792-5p 1 0 0
chr1:24471766|24472071 hsa-miR-5088-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6760-3p 1 0 0
chr1:24471766|24472071 hsa-miR-1207-5p 1 0 0
chr1:24471766|24472071 hsa-miR-4763-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6870-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6752-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6754-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6803-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6819-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6851-5p 1 0 0
chr1:24471766|24472071 hsa-miR-7110-5p 1 0 0
chr1:24471766|24472071 hsa-miR-1249-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6722-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6751-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6763-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6788-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6797-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6808-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6879-5p 1 0 0
chr1:24471766|24472071 hsa-miR-7111-5p 1 0 0
chr1:24471766|24472071 hsa-miR-4685-3p 1 0 0
chr1:24471766|24472071 hsa-miR-4728-5p 1 0 0
chr1:24471766|24472071 hsa-miR-1909-3p 1 0 0
chr1:24471766|24472071 hsa-miR-328-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6777-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6794-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6795-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6848-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6883-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6887-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6731-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6856-5p 1 0 0
chr1:24471766|24472071 hsa-miR-4646-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6891-5p 1 0 0
chr1:24471766|24472071 hsa-miR-10398-5p 1 0 0
chr1:24471766|24472071 hsa-miR-6756-3p 1 0 0
chr1:24471766|24472071 hsa-miR-6805-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:24471766|24472071
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MTHLNSLPAHLLFLPPASTPSFRKIIWERRNI
Nucleotide Sequence TTGACACATCTAAATAGCCTCCCTGCTCACCTTCTGTTTCTCCCTCCTGCCTCCACTCCCAGCTTTAGAAAAATCATTTGGGAAAGGAGAAATATATAA

CircID chr1:24471766|24472071
ORF Type ORF2
Protein Length 39
Nucleotide Length 120
Protein Sequence MAGPSLKGPYQKKKKKREGRGQSKFGSIYMPKLLMITRV
Nucleotide Sequence CTGGCTGGCCCAAGCCTAAAAGGCCCATACCAAAAAAAAAAAAAAAAAAGGGAAGGAAGGGGGCAGAGTAAGTTTGGGAGCATATATATGCCCAAATTATTAATGATCACCCGGGTTTGA

CircID chr1:24471766|24472071
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MLTFCFSLLPPLPALEKSFGKGEIYK
Nucleotide Sequence CTGCTCACCTTCTGTTTCTCCCTCCTGCCTCCACTCCCAGCTTTAGAAAAATCATTTGGGAAAGGAGAAATATATAAATAG

CircID chr1:24471766|24472071
ORF Type ORF4
Protein Length 46
Nucleotide Length 138
Protein Sequence MCQTRVIINNLGIYMLPNLLCPLPSLFFFFFWYGPFRLGPASFLEM
Nucleotide Sequence ATGTGTCAAACCCGGGTGATCATTAATAATTTGGGCATATATATGCTCCCAAACTTACTCTGCCCCCTTCCTTCCCTTTTTTTTTTTTTTTTTTGGTATGGGCCTTTTAGGCTTGGGCCAGCCAGCTTTCTTGAGATG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites