CircNet

General Information

circRNA Basic Information

CircID	chr1:24907259\|24929852
Strand	-
CircType	exon
Host Gene	ENSG00000020633.18;
Algorism	CIRI2;
Sequence	GGAAGAGTTTCACCCTGACCATCACTGTGTTCACCAACCCCACCCAAGTGGCGACCTACCACCGAGCCATCAAGGTGACCGTGGACGGACCCCGGGAGCCCAGACGGCACCGGCAGAAGCTGGAGGACCAGACCAAGCCGTTCCCTGACCGCTTTGGGGACCTGGAACGGCTGCGCATGCGGGTGACACCGAGCACACCCAGCCCCCGAGGCTCACTCAGCACCACAAGCCACTTCAGCAGCCAGCCCCAGACCCCAATCCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:24907259\|24929852
ORF Type	ORF1
Protein Length	41
Nucleotide Length	123
Protein Sequence	MRSRSRSPKRSGNGLVWSSSFCRCRLGSRGPSTVTLMARW*
Nucleotide Sequence	ATGCGCAGCCGTTCCAGGTCCCCAAAGCGGTCAGGGAACGGCTTGGTCTGGTCCTCCAGCTTCTGCCGGTGCCGTCTGGGCTCCCGGGGTCCGTCCACGGTCACCTTGATGGCTCGGTGGTAG

CircID	chr1:24907259\|24929852
ORF Type	ORF2
Protein Length	79
Nucleotide Length	237
Protein Sequence	VFTNPTQVATYHRAIKVTVDGPREPRRHRQKLEDQTKPFPDRFGDLERLRMRVTPSTPSPRGSLSTTSHFSSQPQTPIQ
Nucleotide Sequence	GTGTTCACCAACCCCACCCAAGTGGCGACCTACCACCGAGCCATCAAGGTGACCGTGGACGGACCCCGGGAGCCCAGACGGCACCGGCAGAAGCTGGAGGACCAGACCAAGCCGTTCCCTGACCGCTTTGGGGACCTGGAACGGCTGCGCATGCGGGTGACACCGAGCACACCCAGCCCCCGAGGCTCACTCAGCACCACAAGCCACTTCAGCAGCCAGCCCCAGACCCCAATCCAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:24907259\|24929852	HNRNPA1	0	2	0
chr1:24907259\|24929852	DICER1	2	0	0
chr1:24907259\|24929852	ELAVL1	2	5	1
chr1:24907259\|24929852	U2AF2	2	1	0
chr1:24907259\|24929852	CSTF2T	0	1	1
chr1:24907259\|24929852	RANGAP1	1	0	0
chr1:24907259\|24929852	RBM15B	0	2	0
chr1:24907259\|24929852	CNBP	2	0	0
chr1:24907259\|24929852	HNRNPL	0	1	0
chr1:24907259\|24929852	TAF15	0	1	0
chr1:24907259\|24929852	CPSF6	0	2	0
chr1:24907259\|24929852	FMR1	2	0	0
chr1:24907259\|24929852	FIP1L1	1	1	0
chr1:24907259\|24929852	PTBP1	0	0	1
chr1:24907259\|24929852	HNRNPC	2	24	0
chr1:24907259\|24929852	NUDT21	1	3	0
chr1:24907259\|24929852	EIF4A3	1	2	1
chr1:24907259\|24929852	FBL	6	1	1

CircRNA Information