CircRNA Information

General Information
circRNA Basic Information
CircID chr1:25817824|25817998
Strand -
CircType exon
Host Gene ENSG00000162430.15;
Algorism CIRI2;
Sequence CTCCAGACCAGATGGGGCATGAGCCAGCCAGCTCAGCCAGGCTCCCTGTGTCCTGGGAGGAAGTGTCCCCATCCCCCATGCCCCTTATGGGGAGGGAGGGCGTCTGATGCTCTCTCTCTGCCTCCCCCCCCATCCTGTCAGGCACAGGTGACGGGGGCAGCCCATGCGAGCCCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:25817824|25817998 hsa-miR-149-5p 0 0 1
chr1:25817824|25817998 hsa-miR-149-3p 0 0 1
chr1:25817824|25817998 hsa-miR-558 0 0 1
chr1:25817824|25817998 hsa-miR-625-5p 0 0 1
chr1:25817824|25817998 hsa-miR-625-3p 0 0 1
chr1:25817824|25817998 hsa-miR-650 1 0 1
chr1:25817824|25817998 hsa-miR-1275 0 0 1
chr1:25817824|25817998 hsa-miR-1197 0 1 1
chr1:25817824|25817998 hsa-miR-1827 0 0 1
chr1:25817824|25817998 hsa-miR-324-3p 0 0 1
chr1:25817824|25817998 hsa-miR-550 0 0 1
chr1:25817824|25817998 hsa-miR-220c 0 0 1
chr1:25817824|25817998 hsa-miR-516b 0 0 1
chr1:25817824|25817998 hsa-miR-24 0 0 1
chr1:25817824|25817998 hsa-miR-1201 0 0 1
chr1:25817824|25817998 hsa-miR-762 1 0 0
chr1:25817824|25817998 hsa-miR-665 1 0 0
chr1:25817824|25817998 hsa-miR-940 1 0 0
chr1:25817824|25817998 hsa-miR-1268a 1 0 0
chr1:25817824|25817998 hsa-miR-1913 0 1 0
chr1:25817824|25817998 hsa-miR-2110 1 0 0
chr1:25817824|25817998 hsa-miR-3132 0 1 0
chr1:25817824|25817998 hsa-miR-3196 1 0 0
chr1:25817824|25817998 hsa-miR-4270 0 1 0
chr1:25817824|25817998 hsa-miR-4290 0 1 0
chr1:25817824|25817998 hsa-miR-1268b 1 1 0
chr1:25817824|25817998 hsa-miR-4487 0 1 0
chr1:25817824|25817998 hsa-miR-2392 1 1 0
chr1:25817824|25817998 hsa-miR-4525 0 1 0
chr1:25817824|25817998 hsa-miR-4526 0 1 0
chr1:25817824|25817998 hsa-miR-4538 1 1 0
chr1:25817824|25817998 hsa-miR-4663 0 1 0
chr1:25817824|25817998 hsa-miR-4688 1 0 0
chr1:25817824|25817998 hsa-miR-4706 1 0 0
chr1:25817824|25817998 hsa-miR-4739 1 0 0
chr1:25817824|25817998 hsa-miR-5698 1 1 0
chr1:25817824|25817998 hsa-miR-5787 1 0 0
chr1:25817824|25817998 hsa-miR-6085 1 0 0
chr1:25817824|25817998 hsa-miR-7150 1 0 0
chr1:25817824|25817998 hsa-miR-8073 1 0 0
chr1:25817824|25817998 hsa-miR-8089 1 0 0
chr1:25817824|25817998 hsa-miR-1247-3p 0 1 0
chr1:25817824|25817998 hsa-miR-6765-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6825-5p 1 1 0
chr1:25817824|25817998 hsa-miR-6728-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6880-5p 1 0 0
chr1:25817824|25817998 hsa-miR-4695-5p 1 1 0
chr1:25817824|25817998 hsa-miR-3064-5p 0 1 0
chr1:25817824|25817998 hsa-miR-3622b-5p 0 1 0
chr1:25817824|25817998 hsa-miR-6842-3p 0 1 0
chr1:25817824|25817998 hsa-miR-4761-3p 1 0 0
chr1:25817824|25817998 hsa-miR-3189-5p 0 1 0
chr1:25817824|25817998 hsa-miR-491-5p 0 1 0
chr1:25817824|25817998 hsa-miR-6716-5p 1 0 0
chr1:25817824|25817998 hsa-miR-3151-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6827-5p 0 1 0
chr1:25817824|25817998 hsa-miR-6798-5p 1 1 0
chr1:25817824|25817998 hsa-miR-486-3p 1 0 0
chr1:25817824|25817998 hsa-miR-6881-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6782-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6810-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6882-3p 0 1 0
chr1:25817824|25817998 hsa-miR-5088-5p 0 1 0
chr1:25817824|25817998 hsa-miR-7109-5p 1 1 0
chr1:25817824|25817998 hsa-miR-1226-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6753-5p 1 0 0
chr1:25817824|25817998 hsa-miR-5580-5p 0 1 0
chr1:25817824|25817998 hsa-miR-3667-3p 0 1 0
chr1:25817824|25817998 hsa-miR-4743-5p 1 0 0
chr1:25817824|25817998 hsa-miR-550b-2-5p 1 1 0
chr1:25817824|25817998 hsa-miR-5010-5p 0 1 0
chr1:25817824|25817998 hsa-miR-423-5p 1 0 0
chr1:25817824|25817998 hsa-miR-5000-3p 0 1 0
chr1:25817824|25817998 hsa-miR-1914-5p 0 1 0
chr1:25817824|25817998 hsa-miR-6880-3p 0 1 0
chr1:25817824|25817998 hsa-miR-1249-3p 0 1 0
chr1:25817824|25817998 hsa-miR-6847-3p 0 1 0
chr1:25817824|25817998 hsa-miR-5007-5p 1 0 0
chr1:25817824|25817998 hsa-miR-1207-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6769b-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6816-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6870-5p 0 1 0
chr1:25817824|25817998 hsa-miR-6775-5p 1 1 0
chr1:25817824|25817998 hsa-miR-1343-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6743-5p 1 1 0
chr1:25817824|25817998 hsa-miR-6752-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6754-5p 1 1 0
chr1:25817824|25817998 hsa-miR-6756-5p 1 1 0
chr1:25817824|25817998 hsa-miR-6803-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6813-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6819-5p 1 0 0
chr1:25817824|25817998 hsa-miR-1249-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6808-5p 1 1 0
chr1:25817824|25817998 hsa-miR-7111-5p 1 1 0
chr1:25817824|25817998 hsa-miR-3620-5p 0 1 0
chr1:25817824|25817998 hsa-miR-4728-5p 1 0 0
chr1:25817824|25817998 hsa-miR-5196-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6862-5p 1 1 0
chr1:25817824|25817998 hsa-miR-1237-5p 1 0 0
chr1:25817824|25817998 hsa-miR-328-5p 1 1 0
chr1:25817824|25817998 hsa-miR-4649-5p 1 0 0
chr1:25817824|25817998 hsa-miR-4685-5p 1 0 0
chr1:25817824|25817998 hsa-miR-4745-5p 1 0 0
chr1:25817824|25817998 hsa-miR-4749-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6735-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6777-5p 1 1 0
chr1:25817824|25817998 hsa-miR-6795-5p 1 1 0
chr1:25817824|25817998 hsa-miR-6848-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6887-5p 1 1 0
chr1:25817824|25817998 hsa-miR-6889-5p 1 0 0
chr1:25817824|25817998 hsa-miR-4723-5p 1 1 0
chr1:25817824|25817998 hsa-miR-6831-5p 0 1 0
chr1:25817824|25817998 hsa-miR-6845-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6885-5p 1 0 0
chr1:25817824|25817998 hsa-miR-939-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6511a-5p 0 1 0
chr1:25817824|25817998 hsa-miR-4665-5p 0 1 0
chr1:25817824|25817998 hsa-miR-6750-5p 1 0 0
chr1:25817824|25817998 hsa-miR-3184-5p 1 0 0
chr1:25817824|25817998 hsa-miR-550a-3-5p 1 1 0
chr1:25817824|25817998 hsa-miR-550a-5p 1 1 0
chr1:25817824|25817998 hsa-miR-3085-3p 0 1 0
chr1:25817824|25817998 hsa-miR-4756-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6504-5p 0 1 0
chr1:25817824|25817998 hsa-miR-2682-5p 1 0 0
chr1:25817824|25817998 hsa-miR-6814-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:25817824|25817998
ORF Type ORF1
Protein Length 52
Nucleotide Length 156
Protein Sequence MSQPAQPGSLCPGRKCPHPPCPLWGGRASDALSLPPPPSCQAQVTGAAHASP
Nucleotide Sequence ATGAGCCAGCCAGCTCAGCCAGGCTCCCTGTGTCCTGGGAGGAAGTGTCCCCATCCCCCATGCCCCTTATGGGGAGGGAGGGCGTCTGATGCTCTCTCTCTGCCTCCCCCCCCATCCTGTCAGGCACAGGTGACGGGGGCAGCCCATGCGAGCCCT
CircID chr1:25817824|25817998
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MGGSVPIPHAPYGEGGRLMLSLCLPPHPVRHR
Nucleotide Sequence CTGGGAGGAAGTGTCCCCATCCCCCATGCCCCTTATGGGGAGGGAGGGCGTCTGATGCTCTCTCTCTGCCTCCCCCCCCATCCTGTCAGGCACAGGTGA
CircID chr1:25817824|25817998
ORF Type ORF3
Protein Length 31
Nucleotide Length 96
Protein Sequence MGHEPASSARLPVSWEEVSPSPMPLMGREGV
Nucleotide Sequence ATGGGGCATGAGCCAGCCAGCTCAGCCAGGCTCCCTGTGTCCTGGGAGGAAGTGTCCCCATCCCCCATGCCCCTTATGGGGAGGGAGGGCGTCTGA
CircID chr1:25817824|25817998
ORF Type ORF4
Protein Length 53
Nucleotide Length 159
Protein Sequence MPPSPVPDRMGGEAEREHQTPSLPIRGMGDGDTSSQDTGSLAELAGSCPIWSG
Nucleotide Sequence CTGCCCCCGTCACCTGTGCCTGACAGGATGGGGGGGGAGGCAGAGAGAGAGCATCAGACGCCCTCCCTCCCCATAAGGGGCATGGGGGATGGGGACACTTCCTCCCAGGACACAGGGAGCCTGGCTGAGCTGGCTGGCTCATGCCCCATCTGGTCTGGA
CircID chr1:25817824|25817998
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MGCPRHLCLTGWGGRQRESIRRPPSP
Nucleotide Sequence ATGGGCTGCCCCCGTCACCTGTGCCTGACAGGATGGGGGGGGAGGCAGAGAGAGAGCATCAGACGCCCTCCCTCCCCATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab