CircRNA Information

General Information
circRNA Basic Information
CircID chr1:25863108|25863332
Strand -
CircType exon
Host Gene ENSG00000236528.1;
Algorism CIRI2;
Sequence CTGGCACTTGTGGTAGAGAAGAGCTGGATCATCCGTGGTGGGGTCGGAGGACACGAAGATACGATGCACCACAGGACTAATGTCCAGTGCGTAGGCCAGGACGGAGGGCACCTCCTGGCATGTGCGGCCCAGCAGGCCTGGTTTCTGGATGTACTTGTTATAGCAGGAGCCAATGCAGGAAAGCCAGGCGAGAAAGGCAGCCATGGGCAGAAAAACAGCCTGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:25863108|25863332 hsa-miR-33a-5p 0 0 1
chr1:25863108|25863332 hsa-miR-33a-3p 0 0 1
chr1:25863108|25863332 hsa-miR-187-5p 0 0 1
chr1:25863108|25863332 hsa-miR-187-3p 0 0 1
chr1:25863108|25863332 hsa-miR-370-5p 0 0 1
chr1:25863108|25863332 hsa-miR-370-3p 0 0 1
chr1:25863108|25863332 hsa-miR-604 0 0 1
chr1:25863108|25863332 hsa-miR-33b-5p 0 0 1
chr1:25863108|25863332 hsa-miR-33b-3p 0 0 1
chr1:25863108|25863332 hsa-miR-640 0 0 1
chr1:25863108|25863332 hsa-miR-647 0 1 1
chr1:25863108|25863332 hsa-miR-665 0 0 1
chr1:25863108|25863332 hsa-miR-942-5p 0 0 1
chr1:25863108|25863332 hsa-miR-942-3p 0 0 1
chr1:25863108|25863332 hsa-miR-140-3p 0 0 1
chr1:25863108|25863332 hsa-miR-324-3p 0 0 1
chr1:25863108|25863332 hsa-miR-521 0 0 1
chr1:25863108|25863332 hsa-miR-544 0 0 1
chr1:25863108|25863332 hsa-miR-346 1 1 0
chr1:25863108|25863332 hsa-miR-1470 0 1 0
chr1:25863108|25863332 hsa-miR-4290 0 1 0
chr1:25863108|25863332 hsa-miR-3654 0 1 0
chr1:25863108|25863332 hsa-miR-4641 0 1 0
chr1:25863108|25863332 hsa-miR-4683 1 0 0
chr1:25863108|25863332 hsa-miR-766-3p 1 0 0
chr1:25863108|25863332 hsa-miR-6774-3p 0 1 0
chr1:25863108|25863332 hsa-miR-6882-3p 1 1 0
chr1:25863108|25863332 hsa-miR-5010-3p 0 1 0
chr1:25863108|25863332 hsa-miR-6736-3p 1 0 0
chr1:25863108|25863332 hsa-miR-1180-3p 1 0 0
chr1:25863108|25863332 hsa-miR-1911-3p 0 1 0
chr1:25863108|25863332 hsa-miR-6782-3p 1 0 0
chr1:25863108|25863332 hsa-miR-4714-5p 1 0 0
chr1:25863108|25863332 hsa-miR-5586-5p 1 1 0
chr1:25863108|25863332 hsa-miR-6848-5p 1 0 0
chr1:25863108|25863332 hsa-miR-1271-3p 1 0 0
chr1:25863108|25863332 hsa-miR-6893-3p 0 1 0
chr1:25863108|25863332 hsa-miR-10392-3p 1 0 0
chr1:25863108|25863332 hsa-miR-4691-5p 1 0 0
chr1:25863108|25863332 hsa-miR-26a-5p 0 1 0
chr1:25863108|25863332 hsa-miR-9902 0 1 0
chr1:25863108|25863332 hsa-miR-3922-3p 0 1 0
chr1:25863108|25863332 hsa-miR-6820-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:25863108|25863332
ORF Type ORF1
Protein Length 75
Nucleotide Length 225
Protein Sequence LALVVEKSWIIRGGVGGHEDTMHHRTNVQCVGQDGGHLLACAAQQAWFLDVLVIAGANAGKPGEKGSHGQKNSLH
Nucleotide Sequence CTGGCACTTGTGGTAGAGAAGAGCTGGATCATCCGTGGTGGGGTCGGAGGACACGAAGATACGATGCACCACAGGACTAATGTCCAGTGCGTAGGCCAGGACGGAGGGCACCTCCTGGCATGTGCGGCCCAGCAGGCCTGGTTTCTGGATGTACTTGTTATAGCAGGAGCCAATGCAGGAAAGCCAGGCGAGAAAGGCAGCCATGGGCAGAAAAACAGCCTGCAC

CircID chr1:25863108|25863332
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MCGPAGLVSGCTCYSRSQCRKARRERQPWAEKQPA
Nucleotide Sequence ATGTGCGGCCCAGCAGGCCTGGTTTCTGGATGTACTTGTTATAGCAGGAGCCAATGCAGGAAAGCCAGGCGAGAAAGGCAGCCATGGGCAGAAAAACAGCCTGCA

CircID chr1:25863108|25863332
ORF Type ORF3
Protein Length 70
Nucleotide Length 210
Protein Sequence MPMAAFLAWLSCIGSCYNKYIQKPGLLGRTCQEVPSVLAYALDISPVVHRIFVSSDPTTDDPALLYHKCQ
Nucleotide Sequence CTGCCCATGGCTGCCTTTCTCGCCTGGCTTTCCTGCATTGGCTCCTGCTATAACAAGTACATCCAGAAACCAGGCCTGCTGGGCCGCACATGCCAGGAGGTGCCCTCCGTCCTGGCCTACGCACTGGACATTAGTCCTGTGGTGCATCGTATCTTCGTGTCCTCCGACCCCACCACGGATGATCCAGCTCTTCTCTACCACAAGTGCCAG

CircID chr1:25863108|25863332
ORF Type ORF4
Protein Length 72
Nucleotide Length 216
Protein Sequence MFFCPWLPFSPGFPALAPAITSTSRNQACWAAHARRCPPSWPTHWTLVLWCIVSSCPPTPPRMIQLFSTTSA
Nucleotide Sequence CTGTTTTTCTGCCCATGGCTGCCTTTCTCGCCTGGCTTTCCTGCATTGGCTCCTGCTATAACAAGTACATCCAGAAACCAGGCCTGCTGGGCCGCACATGCCAGGAGGTGCCCTCCGTCCTGGCCTACGCACTGGACATTAGTCCTGTGGTGCATCGTATCTTCGTGTCCTCCGACCCCACCACGGATGATCCAGCTCTTCTCTACCACAAGTGCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites