CircRNA Information

General Information
circRNA Basic Information
CircID chr1:26189483|26189603
Strand -
CircType exon
Host Gene ENSG00000142675.16;
Algorism CIRI2;
Sequence CCTGAAGAGCACTCCCATCTCTGCCCCCTGACCTCAGAGAGCAGCCTCCGACCTCCTGACCTCTGACCCTGGCCAGCACTCTAGCTCCTGACCTTTGACCCGAGGGCCACCTCAACCCCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:26189483|26189603 hsa-miR-328-5p 0 0 1
chr1:26189483|26189603 hsa-miR-328-3p 0 0 1
chr1:26189483|26189603 hsa-miR-708-5p 0 0 1
chr1:26189483|26189603 hsa-miR-708-3p 0 0 1
chr1:26189483|26189603 hsa-miR-663b 0 0 1
chr1:26189483|26189603 hsa-miR-1291 0 0 1
chr1:26189483|26189603 hsa-miR-512-3p 1 1 1
chr1:26189483|26189603 hsa-miR-486-3p 1 0 1
chr1:26189483|26189603 hsa-miR-485-5p 0 0 1
chr1:26189483|26189603 hsa-miR-28-5p 0 0 1
chr1:26189483|26189603 hsa-miR-588 1 0 0
chr1:26189483|26189603 hsa-miR-608 0 1 0
chr1:26189483|26189603 hsa-miR-612 1 0 0
chr1:26189483|26189603 hsa-miR-637 1 0 0
chr1:26189483|26189603 hsa-miR-650 1 0 0
chr1:26189483|26189603 hsa-miR-661 1 0 0
chr1:26189483|26189603 hsa-miR-1182 1 0 0
chr1:26189483|26189603 hsa-miR-1538 1 0 0
chr1:26189483|26189603 hsa-miR-3132 1 0 0
chr1:26189483|26189603 hsa-miR-3147 1 0 0
chr1:26189483|26189603 hsa-miR-3196 1 0 0
chr1:26189483|26189603 hsa-miR-4257 1 1 0
chr1:26189483|26189603 hsa-miR-3937 1 0 0
chr1:26189483|26189603 hsa-miR-4440 1 0 0
chr1:26189483|26189603 hsa-miR-4466 1 0 0
chr1:26189483|26189603 hsa-miR-4487 1 0 0
chr1:26189483|26189603 hsa-miR-4488 1 0 0
chr1:26189483|26189603 hsa-miR-4498 1 0 0
chr1:26189483|26189603 hsa-miR-4651 1 0 0
chr1:26189483|26189603 hsa-miR-4656 1 0 0
chr1:26189483|26189603 hsa-miR-4688 1 0 0
chr1:26189483|26189603 hsa-miR-4710 1 0 0
chr1:26189483|26189603 hsa-miR-5090 1 0 0
chr1:26189483|26189603 hsa-miR-6069 1 0 0
chr1:26189483|26189603 hsa-miR-6086 1 0 0
chr1:26189483|26189603 hsa-miR-6090 1 0 0
chr1:26189483|26189603 hsa-miR-6132 1 0 0
chr1:26189483|26189603 hsa-miR-6860 1 0 0
chr1:26189483|26189603 hsa-miR-7150 1 0 0
chr1:26189483|26189603 hsa-miR-8089 1 0 0
chr1:26189483|26189603 hsa-miR-12119 1 1 0
chr1:26189483|26189603 hsa-miR-12128 1 0 0
chr1:26189483|26189603 hsa-miR-4435 0 1 0
chr1:26189483|26189603 hsa-miR-504-3p 1 1 0
chr1:26189483|26189603 hsa-miR-7155-5p 0 1 0
chr1:26189483|26189603 hsa-miR-4433a-3p 1 0 0
chr1:26189483|26189603 hsa-miR-6765-5p 1 0 0
chr1:26189483|26189603 hsa-miR-125b-1-3p 1 0 0
chr1:26189483|26189603 hsa-miR-6894-5p 1 0 0
chr1:26189483|26189603 hsa-miR-1972 1 0 0
chr1:26189483|26189603 hsa-miR-4687-3p 1 0 0
chr1:26189483|26189603 hsa-miR-25-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6089 1 0 0
chr1:26189483|26189603 hsa-miR-6757-5p 1 0 0
chr1:26189483|26189603 hsa-miR-4695-5p 1 0 0
chr1:26189483|26189603 hsa-miR-7160-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6890-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6820-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6741-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6762-3p 0 1 0
chr1:26189483|26189603 hsa-miR-6727-5p 1 0 0
chr1:26189483|26189603 hsa-miR-3187-3p 1 0 0
chr1:26189483|26189603 hsa-miR-6721-5p 1 0 0
chr1:26189483|26189603 hsa-miR-197-5p 1 1 0
chr1:26189483|26189603 hsa-miR-7845-5p 1 0 0
chr1:26189483|26189603 hsa-miR-3151-5p 1 0 0
chr1:26189483|26189603 hsa-miR-3180-3p 1 0 0
chr1:26189483|26189603 hsa-miR-6829-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6732-5p 1 1 0
chr1:26189483|26189603 hsa-miR-6805-5p 1 1 0
chr1:26189483|26189603 hsa-miR-6798-5p 1 1 0
chr1:26189483|26189603 hsa-miR-6881-5p 1 0 0
chr1:26189483|26189603 hsa-miR-2467-3p 1 0 0
chr1:26189483|26189603 hsa-miR-6782-5p 1 0 0
chr1:26189483|26189603 hsa-miR-5008-5p 1 0 0
chr1:26189483|26189603 hsa-miR-5006-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6835-5p 1 0 0
chr1:26189483|26189603 hsa-miR-5088-5p 1 0 0
chr1:26189483|26189603 hsa-miR-1226-5p 1 0 0
chr1:26189483|26189603 hsa-miR-1229-5p 1 0 0
chr1:26189483|26189603 hsa-miR-4640-5p 1 0 0
chr1:26189483|26189603 hsa-miR-3127-5p 1 0 0
chr1:26189483|26189603 hsa-miR-296-3p 1 0 0
chr1:26189483|26189603 hsa-miR-6771-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6823-5p 1 0 0
chr1:26189483|26189603 hsa-miR-4756-3p 1 1 0
chr1:26189483|26189603 hsa-miR-6847-5p 1 0 0
chr1:26189483|26189603 hsa-miR-149-3p 1 0 0
chr1:26189483|26189603 hsa-miR-6781-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6877-5p 1 0 0
chr1:26189483|26189603 hsa-miR-423-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6801-5p 1 1 0
chr1:26189483|26189603 hsa-miR-4750-5p 1 0 0
chr1:26189483|26189603 hsa-miR-493-3p 1 0 0
chr1:26189483|26189603 hsa-miR-1207-5p 1 0 0
chr1:26189483|26189603 hsa-miR-1233-5p 1 0 0
chr1:26189483|26189603 hsa-miR-1273h-5p 1 0 0
chr1:26189483|26189603 hsa-miR-4763-3p 1 0 0
chr1:26189483|26189603 hsa-miR-6778-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6787-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6812-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6816-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6865-5p 1 1 0
chr1:26189483|26189603 hsa-miR-6870-5p 1 0 0
chr1:26189483|26189603 hsa-miR-3180 1 0 0
chr1:26189483|26189603 hsa-miR-6726-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6737-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6743-5p 1 1 0
chr1:26189483|26189603 hsa-miR-6803-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6813-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6815-5p 1 1 0
chr1:26189483|26189603 hsa-miR-6819-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6842-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6851-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6722-3p 1 0 0
chr1:26189483|26189603 hsa-miR-6751-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6808-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6879-5p 1 0 0
chr1:26189483|26189603 hsa-miR-1237-5p 1 0 0
chr1:26189483|26189603 hsa-miR-1909-3p 1 0 0
chr1:26189483|26189603 hsa-miR-4685-5p 1 0 0
chr1:26189483|26189603 hsa-miR-4726-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6735-5p 1 0 0
chr1:26189483|26189603 hsa-miR-675-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6794-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6846-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6848-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6858-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6831-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6845-5p 1 0 0
chr1:26189483|26189603 hsa-miR-939-5p 1 0 0
chr1:26189483|26189603 hsa-miR-377-5p 1 1 0
chr1:26189483|26189603 hsa-miR-6855-5p 0 1 0
chr1:26189483|26189603 hsa-miR-4716-3p 1 0 0
chr1:26189483|26189603 hsa-miR-6791-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6529-5p 1 0 0
chr1:26189483|26189603 hsa-miR-6764-5p 1 0 0
chr1:26189483|26189603 hsa-miR-664a-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:26189483|26189603
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence LGLRWPSGQRSGARVLARVRGQEVGGCSLRSGGRDGSALQ
Nucleotide Sequence CTGGGGTTGAGGTGGCCCTCGGGTCAAAGGTCAGGAGCTAGAGTGCTGGCCAGGGTCAGAGGTCAGGAGGTCGGAGGCTGCTCTCTGAGGTCAGGGGGCAGAGATGGGAGTGCTCTTCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab