CircRNA Information

General Information
circRNA Basic Information
CircID chr1:26281262|26281470
Strand -
CircType exon
Host Gene ENSG00000142669.12;
Algorism CIRI2;
Sequence TTCTCCTCCCTCCTCTCTAAATGTAGTCCCCTCTCCTCCATCTAAAGGCAACATTCCTTACCCATTAGTCTCAGAAATTGTCTTAAGCAACAGCCCCAAATGCTGGCTGCCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGCCAAAGGCCCCGCAGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:26281262|26281470 hsa-miR-96-5p 0 0 1
chr1:26281262|26281470 hsa-miR-96-3p 0 0 1
chr1:26281262|26281470 hsa-miR-208a-5p 0 0 1
chr1:26281262|26281470 hsa-miR-208a-3p 0 0 1
chr1:26281262|26281470 hsa-miR-182-5p 0 0 1
chr1:26281262|26281470 hsa-miR-182-3p 0 0 1
chr1:26281262|26281470 hsa-miR-149-5p 0 0 1
chr1:26281262|26281470 hsa-miR-149-3p 0 0 1
chr1:26281262|26281470 hsa-miR-206 0 0 1
chr1:26281262|26281470 hsa-miR-555 0 0 1
chr1:26281262|26281470 hsa-miR-575 0 0 1
chr1:26281262|26281470 hsa-miR-613 0 0 1
chr1:26281262|26281470 hsa-miR-637 0 0 1
chr1:26281262|26281470 hsa-miR-641 0 0 1
chr1:26281262|26281470 hsa-miR-647 0 0 1
chr1:26281262|26281470 hsa-miR-1271-5p 0 0 1
chr1:26281262|26281470 hsa-miR-1271-3p 0 0 1
chr1:26281262|26281470 hsa-miR-765 1 0 1
chr1:26281262|26281470 hsa-miR-744-5p 0 0 1
chr1:26281262|26281470 hsa-miR-744-3p 0 0 1
chr1:26281262|26281470 hsa-miR-208b-5p 0 0 1
chr1:26281262|26281470 hsa-miR-208b-3p 0 0 1
chr1:26281262|26281470 hsa-miR-940 0 0 1
chr1:26281262|26281470 hsa-miR-1303 0 0 1
chr1:26281262|26281470 hsa-miR-1288-5p 0 0 1
chr1:26281262|26281470 hsa-miR-1288-3p 0 0 1
chr1:26281262|26281470 hsa-miR-1321 0 0 1
chr1:26281262|26281470 hsa-miR-1825 0 0 1
chr1:26281262|26281470 hsa-miR-486-3p 0 0 1
chr1:26281262|26281470 hsa-miR-409-3p 0 0 1
chr1:26281262|26281470 hsa-miR-338-3p 0 0 1
chr1:26281262|26281470 hsa-miR-1 0 0 1
chr1:26281262|26281470 hsa-miR-499-5p 0 0 1
chr1:26281262|26281470 hsa-miR-1275 1 0 0
chr1:26281262|26281470 hsa-miR-3132 1 0 0
chr1:26281262|26281470 hsa-miR-3134 1 0 0
chr1:26281262|26281470 hsa-miR-3154 1 0 0
chr1:26281262|26281470 hsa-miR-4314 1 0 0
chr1:26281262|26281470 hsa-miR-3652 1 0 0
chr1:26281262|26281470 hsa-miR-3917 1 0 0
chr1:26281262|26281470 hsa-miR-4443 1 0 0
chr1:26281262|26281470 hsa-miR-4450 1 0 0
chr1:26281262|26281470 hsa-miR-2392 1 0 0
chr1:26281262|26281470 hsa-miR-4516 1 0 0
chr1:26281262|26281470 hsa-miR-4533 1 0 0
chr1:26281262|26281470 hsa-miR-4534 1 0 0
chr1:26281262|26281470 hsa-miR-4648 1 0 0
chr1:26281262|26281470 hsa-miR-4651 1 0 0
chr1:26281262|26281470 hsa-miR-4689 1 0 0
chr1:26281262|26281470 hsa-miR-4706 1 0 0
chr1:26281262|26281470 hsa-miR-4734 1 0 0
chr1:26281262|26281470 hsa-miR-4739 1 0 0
chr1:26281262|26281470 hsa-miR-4784 1 0 0
chr1:26281262|26281470 hsa-miR-5192 1 0 0
chr1:26281262|26281470 hsa-miR-5194 1 0 0
chr1:26281262|26281470 hsa-miR-5698 1 0 0
chr1:26281262|26281470 hsa-miR-6133 1 0 0
chr1:26281262|26281470 hsa-miR-8052 1 0 0
chr1:26281262|26281470 hsa-miR-8082 1 0 0
chr1:26281262|26281470 hsa-miR-8085 1 0 0
chr1:26281262|26281470 hsa-miR-12114 1 0 0
chr1:26281262|26281470 hsa-miR-12118 1 0 0
chr1:26281262|26281470 hsa-miR-12119 1 0 0
chr1:26281262|26281470 hsa-miR-12128 1 0 0
chr1:26281262|26281470 hsa-miR-4433b-3p 1 0 0
chr1:26281262|26281470 hsa-miR-92a-2-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6734-5p 1 0 0
chr1:26281262|26281470 hsa-miR-504-3p 1 0 0
chr1:26281262|26281470 hsa-miR-629-5p 1 0 0
chr1:26281262|26281470 hsa-miR-4433a-3p 1 0 0
chr1:26281262|26281470 hsa-miR-7106-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6825-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6894-5p 1 0 0
chr1:26281262|26281470 hsa-miR-25-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6510-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6728-5p 1 0 0
chr1:26281262|26281470 hsa-miR-8071 1 0 0
chr1:26281262|26281470 hsa-miR-766-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6515-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6873-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6880-5p 1 0 0
chr1:26281262|26281470 hsa-miR-7847-3p 1 0 0
chr1:26281262|26281470 hsa-miR-7154-3p 1 0 0
chr1:26281262|26281470 hsa-miR-6721-5p 1 0 0
chr1:26281262|26281470 hsa-miR-197-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6796-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6805-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6881-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6782-5p 1 0 0
chr1:26281262|26281470 hsa-miR-7109-5p 1 0 0
chr1:26281262|26281470 hsa-miR-1229-5p 1 0 0
chr1:26281262|26281470 hsa-miR-1908-5p 1 0 0
chr1:26281262|26281470 hsa-miR-877-5p 1 0 0
chr1:26281262|26281470 hsa-miR-7854-3p 1 0 0
chr1:26281262|26281470 hsa-miR-6501-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6824-5p 1 0 0
chr1:26281262|26281470 hsa-miR-423-5p 1 0 0
chr1:26281262|26281470 hsa-miR-4652-5p 1 0 0
chr1:26281262|26281470 hsa-miR-873-3p 1 0 0
chr1:26281262|26281470 hsa-miR-483-5p 1 0 0
chr1:26281262|26281470 hsa-miR-3675-5p 1 0 0
chr1:26281262|26281470 hsa-miR-10400-5p 1 0 0
chr1:26281262|26281470 hsa-miR-1207-5p 1 0 0
chr1:26281262|26281470 hsa-miR-4763-3p 1 0 0
chr1:26281262|26281470 hsa-miR-6870-5p 1 0 0
chr1:26281262|26281470 hsa-miR-1343-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6756-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6803-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6851-5p 1 0 0
chr1:26281262|26281470 hsa-miR-11181-3p 1 0 0
chr1:26281262|26281470 hsa-miR-1249-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6751-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6779-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6780a-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6797-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6879-5p 1 0 0
chr1:26281262|26281470 hsa-miR-7111-5p 1 0 0
chr1:26281262|26281470 hsa-miR-4728-5p 1 0 0
chr1:26281262|26281470 hsa-miR-5196-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6780b-5p 1 0 0
chr1:26281262|26281470 hsa-miR-4649-5p 1 0 0
chr1:26281262|26281470 hsa-miR-4745-5p 1 0 0
chr1:26281262|26281470 hsa-miR-4749-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6729-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6738-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6794-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6795-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6846-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6848-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6887-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6831-5p 1 0 0
chr1:26281262|26281470 hsa-miR-3199 1 0 0
chr1:26281262|26281470 hsa-miR-365a-5p 1 0 0
chr1:26281262|26281470 hsa-miR-30c-1-3p 1 0 0
chr1:26281262|26281470 hsa-miR-6731-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6758-5p 1 0 0
chr1:26281262|26281470 hsa-miR-1914-3p 1 0 0
chr1:26281262|26281470 hsa-miR-4665-5p 1 0 0
chr1:26281262|26281470 hsa-miR-6891-5p 1 0 0
chr1:26281262|26281470 hsa-miR-3184-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:26281262|26281470
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MLAAPSQALGPPSCLALADGHLCWFHQPELCQRPRS
Nucleotide Sequence ATGCTGGCTGCCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGCCAAAGGCCCCGCAGT
CircID chr1:26281262|26281470
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MPPAKHWGRHPAWHWLMGTSVGSISQSSAKGPAV
Nucleotide Sequence CTGCCCCCAGCCAAGCATTGGGGCCGCCATCCTGCCTGGCACTGGCTGATGGGCACCTCTGTTGGTTCCATCAGCCAGAGCTCTGCCAAAGGCCCCGCAGTC
CircID chr1:26281262|26281470
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MADGTNRGAHQPVPGRMAAPMLGWGQPAFGAVA
Nucleotide Sequence CTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGCAGCCAGCATTTGGGGCTGTTGCTTAA
CircID chr1:26281262|26281470
ORF Type ORF4
Protein Length 45
Nucleotide Length 138
Protein Sequence MAELWLMEPTEVPISQCQAGWRPQCLAGGSQHLGLLLKTISETNG
Nucleotide Sequence TTGGCAGAGCTCTGGCTGATGGAACCAACAGAGGTGCCCATCAGCCAGTGCCAGGCAGGATGGCGGCCCCAATGCTTGGCTGGGGGCAGCCAGCATTTGGGGCTGTTGCTTAAGACAATTTCTGAGACTAATGGGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab