CircRNA Information

General Information
circRNA Basic Information
CircID chr1:26773460|26773681
Strand -
CircType exon
Host Gene ENSG00000117713.16;
Algorism CIRI2;
Sequence AGCACTATCCCTATGGAGGTCCTTATGACAGAGTGAGGTAAGCATGACCCCAGCTCCTGTCCACTCCCCCAGCACCCTGAAGCTATAGTGGGCTCAATCTGCCTCTCCAATTTTGTTTAGGACGGAGCCTGGAATAGGGCCTGAGGGAAACATGAGCACTGGGGCCCCACAGCCGAATCTCATGCCTTCCAACCCAGACTCGGGGATGTATTCTCCTAGCCG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:26773460|26773681 hsa-miR-185-5p 0 0 1
chr1:26773460|26773681 hsa-miR-185-3p 0 0 1
chr1:26773460|26773681 hsa-miR-484 0 1 1
chr1:26773460|26773681 hsa-miR-520f-5p 0 0 1
chr1:26773460|26773681 hsa-miR-520f-3p 0 0 1
chr1:26773460|26773681 hsa-miR-620 0 0 1
chr1:26773460|26773681 hsa-miR-625-5p 0 0 1
chr1:26773460|26773681 hsa-miR-625-3p 0 0 1
chr1:26773460|26773681 hsa-miR-637 0 0 1
chr1:26773460|26773681 hsa-miR-708-5p 0 0 1
chr1:26773460|26773681 hsa-miR-708-3p 0 0 1
chr1:26773460|26773681 hsa-miR-1270 0 0 1
chr1:26773460|26773681 hsa-miR-1275 0 1 1
chr1:26773460|26773681 hsa-miR-1825 0 0 1
chr1:26773460|26773681 hsa-miR-1827 0 0 1
chr1:26773460|26773681 hsa-miR-1225-3p 0 0 1
chr1:26773460|26773681 hsa-miR-296-5p 1 0 1
chr1:26773460|26773681 hsa-miR-512-3p 0 0 1
chr1:26773460|26773681 hsa-miR-491-5p 0 0 1
chr1:26773460|26773681 hsa-miR-615-5p 1 1 1
chr1:26773460|26773681 hsa-miR-28-5p 0 0 1
chr1:26773460|26773681 hsa-miR-1233 0 0 1
chr1:26773460|26773681 hsa-miR-642 0 0 1
chr1:26773460|26773681 hsa-miR-608 1 0 0
chr1:26773460|26773681 hsa-miR-611 1 0 0
chr1:26773460|26773681 hsa-miR-762 1 0 0
chr1:26773460|26773681 hsa-miR-760 1 0 0
chr1:26773460|26773681 hsa-miR-1182 1 0 0
chr1:26773460|26773681 hsa-miR-1183 1 0 0
chr1:26773460|26773681 hsa-miR-3137 1 0 0
chr1:26773460|26773681 hsa-miR-3138 0 1 0
chr1:26773460|26773681 hsa-miR-3714 1 0 0
chr1:26773460|26773681 hsa-miR-1268b 1 0 0
chr1:26773460|26773681 hsa-miR-3689c 1 1 0
chr1:26773460|26773681 hsa-miR-4505 1 0 0
chr1:26773460|26773681 hsa-miR-4507 0 1 0
chr1:26773460|26773681 hsa-miR-4525 1 0 0
chr1:26773460|26773681 hsa-miR-5090 1 0 0
chr1:26773460|26773681 hsa-miR-5698 1 1 0
chr1:26773460|26773681 hsa-miR-5787 1 0 0
chr1:26773460|26773681 hsa-miR-6069 1 1 0
chr1:26773460|26773681 hsa-miR-6125 1 0 0
chr1:26773460|26773681 hsa-miR-6127 1 0 0
chr1:26773460|26773681 hsa-miR-6860 1 0 0
chr1:26773460|26773681 hsa-miR-7974 1 1 0
chr1:26773460|26773681 hsa-miR-8089 1 0 0
chr1:26773460|26773681 hsa-miR-11400 0 1 0
chr1:26773460|26773681 hsa-miR-134-3p 0 1 0
chr1:26773460|26773681 hsa-miR-4433b-3p 1 0 0
chr1:26773460|26773681 hsa-miR-4731-5p 0 1 0
chr1:26773460|26773681 hsa-miR-7155-5p 0 1 0
chr1:26773460|26773681 hsa-miR-4726-3p 1 0 0
chr1:26773460|26773681 hsa-miR-4433a-3p 1 0 0
chr1:26773460|26773681 hsa-miR-6765-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6861-5p 1 0 0
chr1:26773460|26773681 hsa-miR-4687-3p 1 0 0
chr1:26773460|26773681 hsa-miR-6799-5p 1 0 0
chr1:26773460|26773681 hsa-miR-3692-5p 0 1 0
chr1:26773460|26773681 hsa-miR-8071 1 1 0
chr1:26773460|26773681 hsa-miR-6741-5p 1 1 0
chr1:26773460|26773681 hsa-miR-6806-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6776-5p 1 0 0
chr1:26773460|26773681 hsa-miR-3151-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6772-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6796-5p 1 1 0
chr1:26773460|26773681 hsa-miR-6732-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6827-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6798-5p 1 0 0
chr1:26773460|26773681 hsa-miR-2467-3p 1 0 0
chr1:26773460|26773681 hsa-miR-6782-5p 1 0 0
chr1:26773460|26773681 hsa-miR-1226-5p 1 0 0
chr1:26773460|26773681 hsa-miR-296-3p 1 0 0
chr1:26773460|26773681 hsa-miR-6771-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6823-5p 1 0 0
chr1:26773460|26773681 hsa-miR-149-3p 1 0 0
chr1:26773460|26773681 hsa-miR-6824-5p 1 0 0
chr1:26773460|26773681 hsa-miR-5010-5p 1 0 0
chr1:26773460|26773681 hsa-miR-605-3p 0 1 0
chr1:26773460|26773681 hsa-miR-6847-3p 0 1 0
chr1:26773460|26773681 hsa-miR-6731-3p 0 1 0
chr1:26773460|26773681 hsa-miR-4716-5p 0 1 0
chr1:26773460|26773681 hsa-miR-1207-5p 1 0 0
chr1:26773460|26773681 hsa-miR-1233-5p 1 0 0
chr1:26773460|26773681 hsa-miR-3689b-3p 1 1 0
chr1:26773460|26773681 hsa-miR-6769b-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6870-5p 1 1 0
chr1:26773460|26773681 hsa-miR-6726-5p 1 1 0
chr1:26773460|26773681 hsa-miR-6752-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6803-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6813-5p 1 1 0
chr1:26773460|26773681 hsa-miR-6819-5p 1 0 0
chr1:26773460|26773681 hsa-miR-7110-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6763-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6779-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6797-5p 1 0 0
chr1:26773460|26773681 hsa-miR-7111-5p 1 1 0
chr1:26773460|26773681 hsa-miR-3620-5p 1 0 0
chr1:26773460|26773681 hsa-miR-4728-5p 1 0 0
chr1:26773460|26773681 hsa-miR-3689a-3p 1 0 0
chr1:26773460|26773681 hsa-miR-4726-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6777-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6848-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6889-5p 1 0 0
chr1:26773460|26773681 hsa-miR-4723-5p 1 1 0
chr1:26773460|26773681 hsa-miR-939-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6511a-5p 1 1 0
chr1:26773460|26773681 hsa-miR-3940-5p 1 1 0
chr1:26773460|26773681 hsa-miR-6773-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6785-5p 1 0 0
chr1:26773460|26773681 hsa-miR-3184-5p 1 0 0
chr1:26773460|26773681 hsa-miR-6724-5p 1 0 0
chr1:26773460|26773681 hsa-miR-4756-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:26773460|26773681
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MFRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPS
Nucleotide Sequence TTGTTTAGGACGGAGCCTGGAATAGGGCCTGAGGGAAACATGAGCACTGGGGCCCCACAGCCGAATCTCATGCCTTCCAACCCAGACTCGGGGATGTATTCTCCTAGC
CircID chr1:26773460|26773681
ORF Type ORF2
Protein Length 32
Nucleotide Length 99
Protein Sequence MEGMRFGCGAPVLMFPSGPIPGSVLNKIGEAD
Nucleotide Sequence TTGGAAGGCATGAGATTCGGCTGTGGGGCCCCAGTGCTCATGTTTCCCTCAGGCCCTATTCCAGGCTCCGTCCTAAACAAAATTGGAGAGGCAGATTGA
CircID chr1:26773460|26773681
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MERQIEPTIASGCWGSGQELGSCLPHSVIRTSIGIV
Nucleotide Sequence TTGGAGAGGCAGATTGAGCCCACTATAGCTTCAGGGTGCTGGGGGAGTGGACAGGAGCTGGGGTCATGCTTACCTCACTCTGTCATAAGGACCTCCATAGGGATAGTG
CircID chr1:26773460|26773681
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MWGPSAHVSLRPYSRLRPKQNWRGRLSPL
Nucleotide Sequence CTGTGGGGCCCCAGTGCTCATGTTTCCCTCAGGCCCTATTCCAGGCTCCGTCCTAAACAAAATTGGAGAGGCAGATTGAGCCCACTATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab