CircRNA Information

General Information
circRNA Basic Information
CircID chr1:26854183|26854354
Strand +
CircType exon
Host Gene ENSG00000204160.10;
Algorism CIRI2;
Sequence CAAAAATCCCACAGAATAAAGGGAAATTATCACCAAGGGAATGAAGGAGCCCACAGACCAAAGCAGCCCATGGAGGCTTCCTCTCCACAGCCAGCTATCCAGAGCTGGCCACTCCTCAGTCCTGCTTCACCCTGAGGACCCTGGCTCAGCAAGGCCCAAGCAGTTCCCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:26854183|26854354 hsa-miR-204-5p 0 0 1
chr1:26854183|26854354 hsa-miR-204-3p 0 0 1
chr1:26854183|26854354 hsa-miR-205-5p 0 0 1
chr1:26854183|26854354 hsa-miR-205-3p 0 0 1
chr1:26854183|26854354 hsa-miR-211-5p 0 0 1
chr1:26854183|26854354 hsa-miR-211-3p 0 0 1
chr1:26854183|26854354 hsa-miR-185-5p 0 0 1
chr1:26854183|26854354 hsa-miR-185-3p 0 0 1
chr1:26854183|26854354 hsa-miR-133b 0 0 1
chr1:26854183|26854354 hsa-miR-623 0 0 1
chr1:26854183|26854354 hsa-miR-625-5p 0 0 1
chr1:26854183|26854354 hsa-miR-625-3p 0 0 1
chr1:26854183|26854354 hsa-miR-635 0 0 1
chr1:26854183|26854354 hsa-miR-1298-5p 0 0 1
chr1:26854183|26854354 hsa-miR-1298-3p 0 0 1
chr1:26854183|26854354 hsa-miR-1286 0 0 1
chr1:26854183|26854354 hsa-miR-1290 0 0 1
chr1:26854183|26854354 hsa-miR-1266-5p 0 0 1
chr1:26854183|26854354 hsa-miR-1266-3p 0 0 1
chr1:26854183|26854354 hsa-miR-1275 1 1 1
chr1:26854183|26854354 hsa-miR-671-5p 1 1 1
chr1:26854183|26854354 hsa-miR-628-5p 0 0 1
chr1:26854183|26854354 hsa-miR-9 0 0 1
chr1:26854183|26854354 hsa-miR-133a 0 0 1
chr1:26854183|26854354 hsa-miR-326 1 0 0
chr1:26854183|26854354 hsa-miR-762 1 0 0
chr1:26854183|26854354 hsa-miR-760 1 0 0
chr1:26854183|26854354 hsa-miR-920 1 0 0
chr1:26854183|26854354 hsa-miR-2110 1 0 0
chr1:26854183|26854354 hsa-miR-3125 0 1 0
chr1:26854183|26854354 hsa-miR-4296 0 1 0
chr1:26854183|26854354 hsa-miR-4322 1 1 0
chr1:26854183|26854354 hsa-miR-4265 1 1 0
chr1:26854183|26854354 hsa-miR-3916 0 1 0
chr1:26854183|26854354 hsa-miR-4518 0 1 0
chr1:26854183|26854354 hsa-miR-4525 1 0 0
chr1:26854183|26854354 hsa-miR-1587 1 1 0
chr1:26854183|26854354 hsa-miR-4656 1 0 0
chr1:26854183|26854354 hsa-miR-4706 1 0 0
chr1:26854183|26854354 hsa-miR-4739 1 0 0
chr1:26854183|26854354 hsa-miR-4741 1 0 0
chr1:26854183|26854354 hsa-miR-5698 1 0 0
chr1:26854183|26854354 hsa-miR-5706 0 1 0
chr1:26854183|26854354 hsa-miR-6132 0 1 0
chr1:26854183|26854354 hsa-miR-6165 0 1 0
chr1:26854183|26854354 hsa-miR-6860 1 0 0
chr1:26854183|26854354 hsa-miR-8052 1 0 0
chr1:26854183|26854354 hsa-miR-8077 1 0 0
chr1:26854183|26854354 hsa-miR-12119 0 1 0
chr1:26854183|26854354 hsa-miR-12128 1 0 0
chr1:26854183|26854354 hsa-miR-134-3p 1 1 0
chr1:26854183|26854354 hsa-miR-432-3p 1 0 0
chr1:26854183|26854354 hsa-miR-6765-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6861-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6825-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6799-5p 1 0 0
chr1:26854183|26854354 hsa-miR-7114-5p 0 1 0
chr1:26854183|26854354 hsa-miR-4695-5p 1 0 0
chr1:26854183|26854354 hsa-miR-3064-5p 0 1 0
chr1:26854183|26854354 hsa-miR-3677-5p 0 1 0
chr1:26854183|26854354 hsa-miR-6762-3p 1 1 0
chr1:26854183|26854354 hsa-miR-6742-5p 1 0 0
chr1:26854183|26854354 hsa-miR-491-5p 1 0 0
chr1:26854183|26854354 hsa-miR-3180-3p 1 0 0
chr1:26854183|26854354 hsa-miR-6829-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6827-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6735-3p 1 0 0
chr1:26854183|26854354 hsa-miR-7109-5p 1 0 0
chr1:26854183|26854354 hsa-miR-4786-3p 1 0 0
chr1:26854183|26854354 hsa-miR-1229-5p 1 0 0
chr1:26854183|26854354 hsa-miR-4640-5p 1 0 0
chr1:26854183|26854354 hsa-miR-3677-3p 1 0 0
chr1:26854183|26854354 hsa-miR-937-5p 1 0 0
chr1:26854183|26854354 hsa-miR-5010-5p 1 0 0
chr1:26854183|26854354 hsa-miR-1251-3p 0 1 0
chr1:26854183|26854354 hsa-miR-503-3p 1 0 0
chr1:26854183|26854354 hsa-miR-6812-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6870-5p 1 0 0
chr1:26854183|26854354 hsa-miR-1343-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6726-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6737-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6803-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6813-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6722-3p 1 0 0
chr1:26854183|26854354 hsa-miR-6751-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6763-5p 0 1 0
chr1:26854183|26854354 hsa-miR-7111-5p 1 0 0
chr1:26854183|26854354 hsa-miR-892c-3p 0 1 0
chr1:26854183|26854354 hsa-miR-3620-5p 1 1 0
chr1:26854183|26854354 hsa-miR-6780b-5p 1 0 0
chr1:26854183|26854354 hsa-miR-4685-5p 1 0 0
chr1:26854183|26854354 hsa-miR-4725-3p 1 0 0
chr1:26854183|26854354 hsa-miR-4726-5p 1 0 0
chr1:26854183|26854354 hsa-miR-4749-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6794-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6795-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6858-5p 0 1 0
chr1:26854183|26854354 hsa-miR-4723-5p 1 0 0
chr1:26854183|26854354 hsa-miR-939-5p 1 0 0
chr1:26854183|26854354 hsa-miR-3940-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6856-5p 1 0 0
chr1:26854183|26854354 hsa-miR-1199-5p 0 1 0
chr1:26854183|26854354 hsa-miR-4665-5p 1 1 0
chr1:26854183|26854354 hsa-miR-4747-5p 1 0 0
chr1:26854183|26854354 hsa-miR-4472 0 1 0
chr1:26854183|26854354 hsa-miR-5591-5p 1 0 0
chr1:26854183|26854354 hsa-miR-6753-3p 1 0 0
chr1:26854183|26854354 hsa-miR-7107-3p 1 1 0
chr1:26854183|26854354 hsa-miR-6859-5p 0 1 0
chr1:26854183|26854354 hsa-miR-6504-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:26854183|26854354
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MKEPTDQSSPWRLPLHSQLSRAGHSSVLLHPEDPGSARPKQFPH
Nucleotide Sequence ATGAAGGAGCCCACAGACCAAAGCAGCCCATGGAGGCTTCCTCTCCACAGCCAGCTATCCAGAGCTGGCCACTCCTCAGTCCTGCTTCACCCTGAGGACCCTGGCTCAGCAAGGCCCAAGCAGTTCCCCCAC
CircID chr1:26854183|26854354
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MAVERKPPWAALVCGLLHSLGDNFPLFCGIF
Nucleotide Sequence CTGGCTGTGGAGAGGAAGCCTCCATGGGCTGCTTTGGTCTGTGGGCTCCTTCATTCCCTTGGTGATAATTTCCCTTTATTCTGTGGGATTTTT
CircID chr1:26854183|26854354
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MDSWLWRGSLHGLLWSVGSFIPLVIISLYSVGFL
Nucleotide Sequence CTGGATAGCTGGCTGTGGAGAGGAAGCCTCCATGGGCTGCTTTGGTCTGTGGGCTCCTTCATTCCCTTGGTGATAATTTCCCTTTATTCTGTGGGATTTTTG
CircID chr1:26854183|26854354
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MLSQGPQGEAGLRSGQLWIAGCGEEASMGCFGLWAPSFPW
Nucleotide Sequence TTGCTGAGCCAGGGTCCTCAGGGTGAAGCAGGACTGAGGAGTGGCCAGCTCTGGATAGCTGGCTGTGGAGAGGAAGCCTCCATGGGCTGCTTTGGTCTGTGGGCTCCTTCATTCCCTTGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab