CircRNA Information

General Information
circRNA Basic Information
CircID chr1:26863295|26863585
Strand +
CircType exon
Host Gene ENSG00000175793.11;
Algorism CIRI2;
Sequence CCTTCATCTTCAGGTAGAAGACCCGGCTCTCGGCGTCCCCGGCCTCCTTGATGAGGTGGCTGTCCAGCAGGCCCAGCACGGTGTCGCACACGCCCTGGAGCTCAGTCTCCACCTTCTCCCGGTACTCACGCACCTCGGGCCCCTTCTCCTCCGAGCCCTCCTCGTTGCTTTTCTGCTCAATACTGGACAGCACCCTCCAGGCAGCCCTCTGGCCGCCCACCACGTTCTTATAGGCTACTGAGAGCAGGTTTCGCTCTTCGCAGGAGAGCTCCTCGCCCTTCTCCACGGCGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:26863295|26863585 hsa-miR-198 1 0 1
chr1:26863295|26863585 hsa-miR-370-5p 0 0 1
chr1:26863295|26863585 hsa-miR-370-3p 0 0 1
chr1:26863295|26863585 hsa-miR-626 0 0 1
chr1:26863295|26863585 hsa-miR-661 0 0 1
chr1:26863295|26863585 hsa-miR-765 1 0 1
chr1:26863295|26863585 hsa-miR-891a-5p 0 0 1
chr1:26863295|26863585 hsa-miR-891a-3p 0 0 1
chr1:26863295|26863585 hsa-miR-541-5p 0 0 1
chr1:26863295|26863585 hsa-miR-541-3p 0 0 1
chr1:26863295|26863585 hsa-miR-708-5p 0 0 1
chr1:26863295|26863585 hsa-miR-708-3p 0 0 1
chr1:26863295|26863585 hsa-miR-936 0 0 1
chr1:26863295|26863585 hsa-miR-1287-5p 0 0 1
chr1:26863295|26863585 hsa-miR-1287-3p 0 0 1
chr1:26863295|26863585 hsa-miR-770-5p 0 0 1
chr1:26863295|26863585 hsa-miR-193a-5p 0 0 1
chr1:26863295|26863585 hsa-miR-654-5p 0 0 1
chr1:26863295|26863585 hsa-miR-28-5p 0 0 1
chr1:26863295|26863585 hsa-miR-199b-3p 0 0 1
chr1:26863295|26863585 hsa-miR-199a-3p 0 0 1
chr1:26863295|26863585 hsa-miR-548b-3p 0 0 1
chr1:26863295|26863585 hsa-miR-151-5p 0 0 1
chr1:26863295|26863585 hsa-miR-1268 0 0 1
chr1:26863295|26863585 hsa-miR-1254 0 0 1
chr1:26863295|26863585 hsa-miR-608 1 0 0
chr1:26863295|26863585 hsa-miR-611 1 0 0
chr1:26863295|26863585 hsa-miR-663a 1 0 0
chr1:26863295|26863585 hsa-miR-658 1 0 0
chr1:26863295|26863585 hsa-miR-762 1 0 0
chr1:26863295|26863585 hsa-miR-298 1 0 0
chr1:26863295|26863585 hsa-miR-663b 1 0 0
chr1:26863295|26863585 hsa-miR-1268a 1 0 0
chr1:26863295|26863585 hsa-miR-1538 1 0 0
chr1:26863295|26863585 hsa-miR-3131 1 0 0
chr1:26863295|26863585 hsa-miR-3132 1 0 0
chr1:26863295|26863585 hsa-miR-3137 1 0 0
chr1:26863295|26863585 hsa-miR-3196 1 0 0
chr1:26863295|26863585 hsa-miR-4281 1 0 0
chr1:26863295|26863585 hsa-miR-3659 1 0 0
chr1:26863295|26863585 hsa-miR-3907 1 0 0
chr1:26863295|26863585 hsa-miR-1268b 1 0 0
chr1:26863295|26863585 hsa-miR-4449 1 0 0
chr1:26863295|26863585 hsa-miR-4466 1 0 0
chr1:26863295|26863585 hsa-miR-4498 1 0 0
chr1:26863295|26863585 hsa-miR-4516 1 0 0
chr1:26863295|26863585 hsa-miR-4538 1 0 0
chr1:26863295|26863585 hsa-miR-4651 1 0 0
chr1:26863295|26863585 hsa-miR-4656 1 0 0
chr1:26863295|26863585 hsa-miR-4663 1 0 0
chr1:26863295|26863585 hsa-miR-4669 1 0 0
chr1:26863295|26863585 hsa-miR-4689 1 0 0
chr1:26863295|26863585 hsa-miR-4706 1 0 0
chr1:26863295|26863585 hsa-miR-4721 1 0 0
chr1:26863295|26863585 hsa-miR-4739 1 0 0
chr1:26863295|26863585 hsa-miR-4741 1 0 0
chr1:26863295|26863585 hsa-miR-5192 1 0 0
chr1:26863295|26863585 hsa-miR-5693 1 0 0
chr1:26863295|26863585 hsa-miR-5705 1 0 0
chr1:26863295|26863585 hsa-miR-5787 1 0 0
chr1:26863295|26863585 hsa-miR-6085 1 0 0
chr1:26863295|26863585 hsa-miR-6124 1 0 0
chr1:26863295|26863585 hsa-miR-6860 1 0 0
chr1:26863295|26863585 hsa-miR-8055 1 0 0
chr1:26863295|26863585 hsa-miR-8089 1 0 0
chr1:26863295|26863585 hsa-miR-12120 1 0 0
chr1:26863295|26863585 hsa-miR-4433b-3p 1 0 0
chr1:26863295|26863585 hsa-miR-6734-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6765-5p 1 0 0
chr1:26863295|26863585 hsa-miR-7106-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6894-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6799-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6804-5p 1 0 0
chr1:26863295|26863585 hsa-miR-139-3p 1 0 0
chr1:26863295|26863585 hsa-miR-7114-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6089 1 0 0
chr1:26863295|26863585 hsa-miR-6867-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6746-5p 1 0 0
chr1:26863295|26863585 hsa-miR-3677-5p 1 0 0
chr1:26863295|26863585 hsa-miR-7160-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6741-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6759-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4655-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6793-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6829-5p 1 0 0
chr1:26863295|26863585 hsa-miR-656-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6805-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6798-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6760-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6821-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6850-5p 1 0 0
chr1:26863295|26863585 hsa-miR-615-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6786-5p 1 0 0
chr1:26863295|26863585 hsa-miR-5088-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4786-3p 1 0 0
chr1:26863295|26863585 hsa-miR-6784-5p 1 0 0
chr1:26863295|26863585 hsa-miR-296-3p 1 0 0
chr1:26863295|26863585 hsa-miR-6771-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4732-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6749-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6501-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4743-5p 1 0 0
chr1:26863295|26863585 hsa-miR-149-3p 1 0 0
chr1:26863295|26863585 hsa-miR-6781-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6869-5p 1 0 0
chr1:26863295|26863585 hsa-miR-423-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6818-5p 1 0 0
chr1:26863295|26863585 hsa-miR-379-5p 1 0 0
chr1:26863295|26863585 hsa-miR-1233-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4763-3p 1 0 0
chr1:26863295|26863585 hsa-miR-6769b-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6870-5p 1 0 0
chr1:26863295|26863585 hsa-miR-1343-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6737-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6743-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6752-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6754-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6769a-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6803-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6819-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6851-5p 1 0 0
chr1:26863295|26863585 hsa-miR-11181-3p 1 0 0
chr1:26863295|26863585 hsa-miR-1249-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6774-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6779-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6788-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6797-5p 1 0 0
chr1:26863295|26863585 hsa-miR-7111-5p 1 0 0
chr1:26863295|26863585 hsa-miR-3620-5p 1 0 0
chr1:26863295|26863585 hsa-miR-5196-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6780b-5p 1 0 0
chr1:26863295|26863585 hsa-miR-10396a-5p 1 0 0
chr1:26863295|26863585 hsa-miR-10396b-5p 1 0 0
chr1:26863295|26863585 hsa-miR-10526-3p 1 0 0
chr1:26863295|26863585 hsa-miR-1909-3p 1 0 0
chr1:26863295|26863585 hsa-miR-328-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4632-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4649-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4725-3p 1 0 0
chr1:26863295|26863585 hsa-miR-4726-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4745-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4749-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6729-5p 1 0 0
chr1:26863295|26863585 hsa-miR-675-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6777-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6794-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6846-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6848-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6858-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6883-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6889-5p 1 0 0
chr1:26863295|26863585 hsa-miR-939-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4758-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6731-5p 1 0 0
chr1:26863295|26863585 hsa-miR-1914-3p 1 0 0
chr1:26863295|26863585 hsa-miR-6736-5p 1 0 0
chr1:26863295|26863585 hsa-miR-10398-3p 1 0 0
chr1:26863295|26863585 hsa-miR-6891-5p 1 0 0
chr1:26863295|26863585 hsa-miR-4472 1 0 0
chr1:26863295|26863585 hsa-miR-4716-3p 1 0 0
chr1:26863295|26863585 hsa-miR-6785-5p 1 0 0
chr1:26863295|26863585 hsa-miR-3184-5p 1 0 0
chr1:26863295|26863585 hsa-miR-6724-5p 1 0 0
chr1:26863295|26863585 hsa-miR-342-5p 1 0 0
chr1:26863295|26863585 hsa-miR-550a-5p 1 0 0
chr1:26863295|26863585 hsa-miR-5195-3p 1 0 0
chr1:26863295|26863585 hsa-miR-3129-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:26863295|26863585
ORF Type ORF1
Protein Length 48
Nucleotide Length 147
Protein Sequence MELSLHLLPVLTHLGPLLLRALLVAFLLNTGQHPPGSPLAAHHVLIGY
Nucleotide Sequence CTGGAGCTCAGTCTCCACCTTCTCCCGGTACTCACGCACCTCGGGCCCCTTCTCCTCCGAGCCCTCCTCGTTGCTTTTCTGCTCAATACTGGACAGCACCCTCCAGGCAGCCCTCTGGCCGCCCACCACGTTCTTATAGGCTACTGA
CircID chr1:26863295|26863585
ORF Type ORF2
Protein Length 61
Nucleotide Length 186
Protein Sequence MMRWLSSRPSTVSHTPWSSVSTFSRYSRTSGPFSSEPSSLLFCSILDSTLQAALWPPTTFL
Nucleotide Sequence TTGATGAGGTGGCTGTCCAGCAGGCCCAGCACGGTGTCGCACACGCCCTGGAGCTCAGTCTCCACCTTCTCCCGGTACTCACGCACCTCGGGCCCCTTCTCCTCCGAGCCCTCCTCGTTGCTTTTCTGCTCAATACTGGACAGCACCCTCCAGGCAGCCCTCTGGCCGCCCACCACGTTCTTATAG
CircID chr1:26863295|26863585
ORF Type ORF3
Protein Length 64
Nucleotide Length 195
Protein Sequence MPGGCCPVLSRKATRRARRRRGPRCVSTGRRWRLSSRACATPCWACWTATSSRRPGTPRAGSST
Nucleotide Sequence CTGCCTGGAGGGTGCTGTCCAGTATTGAGCAGAAAAGCAACGAGGAGGGCTCGGAGGAGAAGGGGCCCGAGGTGCGTGAGTACCGGGAGAAGGTGGAGACTGAGCTCCAGGGCGTGTGCGACACCGTGCTGGGCCTGCTGGACAGCCACCTCATCAAGGAGGCCGGGGACGCCGAGAGCCGGGTCTTCTACCTGA
CircID chr1:26863295|26863585
ORF Type ORF4
Protein Length 82
Nucleotide Length 246
Protein Sequence MLSVAYKNVVGGQRAAWRVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMK
Nucleotide Sequence CTGCTCTCAGTAGCCTATAAGAACGTGGTGGGCGGCCAGAGGGCTGCCTGGAGGGTGCTGTCCAGTATTGAGCAGAAAAGCAACGAGGAGGGCTCGGAGGAGAAGGGGCCCGAGGTGCGTGAGTACCGGGAGAAGGTGGAGACTGAGCTCCAGGGCGTGTGCGACACCGTGCTGGGCCTGCTGGACAGCCACCTCATCAAGGAGGCCGGGGACGCCGAGAGCCGGGTCTTCTACCTGAAGATGAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab