CircRNA Information

General Information
circRNA Basic Information
CircID chr1:26863360|26863473
Strand +
CircType exon
Host Gene ENSG00000175793.11;
Algorism CIRI2;
Sequence CTTCTCCCGGTACTCACGCACCTCGGGCCCCTTCTCCTCCGAGCCCTCCTCGTTGCTTTTCTGCTCAATACTGGACAGCACCCTCCAGGCAGCCCTCTGGCCGCCCACCACGTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:26863360|26863473 hsa-miR-198 1 0 1
chr1:26863360|26863473 hsa-miR-626 0 0 1
chr1:26863360|26863473 hsa-miR-661 0 0 1
chr1:26863360|26863473 hsa-miR-765 1 0 1
chr1:26863360|26863473 hsa-miR-891a-5p 0 0 1
chr1:26863360|26863473 hsa-miR-891a-3p 0 0 1
chr1:26863360|26863473 hsa-miR-541-5p 0 0 1
chr1:26863360|26863473 hsa-miR-541-3p 0 0 1
chr1:26863360|26863473 hsa-miR-770-5p 0 0 1
chr1:26863360|26863473 hsa-miR-654-5p 0 0 1
chr1:26863360|26863473 hsa-miR-151-5p 0 0 1
chr1:26863360|26863473 hsa-miR-1254 0 0 1
chr1:26863360|26863473 hsa-miR-608 1 0 0
chr1:26863360|26863473 hsa-miR-611 1 0 0
chr1:26863360|26863473 hsa-miR-663a 1 0 0
chr1:26863360|26863473 hsa-miR-658 1 0 0
chr1:26863360|26863473 hsa-miR-762 1 0 0
chr1:26863360|26863473 hsa-miR-298 1 0 0
chr1:26863360|26863473 hsa-miR-663b 1 0 0
chr1:26863360|26863473 hsa-miR-1268a 1 0 0
chr1:26863360|26863473 hsa-miR-1538 1 0 0
chr1:26863360|26863473 hsa-miR-2861 1 0 0
chr1:26863360|26863473 hsa-miR-3131 1 0 0
chr1:26863360|26863473 hsa-miR-3154 1 0 0
chr1:26863360|26863473 hsa-miR-3185 1 0 0
chr1:26863360|26863473 hsa-miR-3196 1 0 0
chr1:26863360|26863473 hsa-miR-3652 1 0 0
chr1:26863360|26863473 hsa-miR-3659 1 0 0
chr1:26863360|26863473 hsa-miR-3907 1 0 0
chr1:26863360|26863473 hsa-miR-1268b 1 0 0
chr1:26863360|26863473 hsa-miR-4449 1 0 0
chr1:26863360|26863473 hsa-miR-4466 1 0 0
chr1:26863360|26863473 hsa-miR-4498 1 0 0
chr1:26863360|26863473 hsa-miR-4516 1 0 0
chr1:26863360|26863473 hsa-miR-4538 1 0 0
chr1:26863360|26863473 hsa-miR-4651 1 0 0
chr1:26863360|26863473 hsa-miR-4656 1 0 0
chr1:26863360|26863473 hsa-miR-4669 1 0 0
chr1:26863360|26863473 hsa-miR-4674 1 0 0
chr1:26863360|26863473 hsa-miR-4688 1 0 0
chr1:26863360|26863473 hsa-miR-4689 1 0 0
chr1:26863360|26863473 hsa-miR-4721 1 0 0
chr1:26863360|26863473 hsa-miR-4739 1 0 0
chr1:26863360|26863473 hsa-miR-4741 1 0 0
chr1:26863360|26863473 hsa-miR-4784 1 0 0
chr1:26863360|26863473 hsa-miR-5090 1 0 0
chr1:26863360|26863473 hsa-miR-5192 1 0 0
chr1:26863360|26863473 hsa-miR-5787 1 0 0
chr1:26863360|26863473 hsa-miR-6085 1 0 0
chr1:26863360|26863473 hsa-miR-6124 1 0 0
chr1:26863360|26863473 hsa-miR-6860 1 0 0
chr1:26863360|26863473 hsa-miR-12120 1 0 0
chr1:26863360|26863473 hsa-miR-4433b-3p 1 0 0
chr1:26863360|26863473 hsa-miR-6734-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6765-5p 1 0 0
chr1:26863360|26863473 hsa-miR-3150a-3p 1 0 0
chr1:26863360|26863473 hsa-miR-7106-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6894-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4687-3p 1 0 0
chr1:26863360|26863473 hsa-miR-6804-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6089 1 0 0
chr1:26863360|26863473 hsa-miR-4695-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6746-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4722-5p 1 0 0
chr1:26863360|26863473 hsa-miR-3677-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6741-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6759-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6721-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4655-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6829-5p 1 0 0
chr1:26863360|26863473 hsa-miR-656-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6805-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6760-5p 1 0 0
chr1:26863360|26863473 hsa-miR-3150b-3p 1 0 0
chr1:26863360|26863473 hsa-miR-615-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6786-5p 1 0 0
chr1:26863360|26863473 hsa-miR-5088-5p 1 0 0
chr1:26863360|26863473 hsa-miR-7109-5p 1 0 0
chr1:26863360|26863473 hsa-miR-1228-5p 1 0 0
chr1:26863360|26863473 hsa-miR-296-3p 1 0 0
chr1:26863360|26863473 hsa-miR-92b-5p 1 0 0
chr1:26863360|26863473 hsa-miR-877-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4732-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6749-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6501-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4743-5p 1 0 0
chr1:26863360|26863473 hsa-miR-149-3p 1 0 0
chr1:26863360|26863473 hsa-miR-6781-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6869-5p 1 0 0
chr1:26863360|26863473 hsa-miR-10400-5p 1 0 0
chr1:26863360|26863473 hsa-miR-1233-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4763-3p 1 0 0
chr1:26863360|26863473 hsa-miR-6769b-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6870-5p 1 0 0
chr1:26863360|26863473 hsa-miR-1343-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6737-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6743-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6752-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6754-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6769a-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6803-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6819-5p 1 0 0
chr1:26863360|26863473 hsa-miR-11181-3p 1 0 0
chr1:26863360|26863473 hsa-miR-1249-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6774-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6779-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6797-5p 1 0 0
chr1:26863360|26863473 hsa-miR-7111-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4728-5p 1 0 0
chr1:26863360|26863473 hsa-miR-5196-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6780b-5p 1 0 0
chr1:26863360|26863473 hsa-miR-10396a-5p 1 0 0
chr1:26863360|26863473 hsa-miR-10396b-5p 1 0 0
chr1:26863360|26863473 hsa-miR-10526-3p 1 0 0
chr1:26863360|26863473 hsa-miR-1909-3p 1 0 0
chr1:26863360|26863473 hsa-miR-328-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4632-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4725-3p 1 0 0
chr1:26863360|26863473 hsa-miR-4726-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4745-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6735-5p 1 0 0
chr1:26863360|26863473 hsa-miR-675-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6777-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6794-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6846-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6848-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6858-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6883-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6889-5p 1 0 0
chr1:26863360|26863473 hsa-miR-939-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6511a-5p 1 0 0
chr1:26863360|26863473 hsa-miR-1914-3p 1 0 0
chr1:26863360|26863473 hsa-miR-4747-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6891-5p 1 0 0
chr1:26863360|26863473 hsa-miR-4472 1 0 0
chr1:26863360|26863473 hsa-miR-6785-5p 1 0 0
chr1:26863360|26863473 hsa-miR-6724-5p 1 0 0
chr1:26863360|26863473 hsa-miR-342-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:26863360|26863473
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MSSIEQKSNEEGSEEKGPEVREYREK
Nucleotide Sequence CTGTCCAGTATTGAGCAGAAAAGCAACGAGGAGGGCTCGGAGGAGAAGGGGCCCGAGGTGCGTGAGTACCGGGAGAAG
CircID chr1:26863360|26863473
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MPGGCCPVLSRKATRRARRRRGPRCVSTGR
Nucleotide Sequence CTGCCTGGAGGGTGCTGTCCAGTATTGAGCAGAAAAGCAACGAGGAGGGCTCGGAGGAGAAGGGGCCCGAGGTGCGTGAGTACCGGGAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab