CircRNA Information

General Information
circRNA Basic Information
CircID chr1:26941457|26945686
Strand +
CircType exon
Host Gene ENSG00000090273.13;
Algorism find_circ;CIRI2;DCC;
Sequence CTTATCACACAGACTTTCAGCCACCACAATCAGCTGGCACAGAAGACCCGGCGGGAGAAGAGAGCCCGGCAGGAGGCCGAGCGGCGGGAGAAGGCGGAGCGGGCGGCCAGACTGGCCAAGGAAGCCAAGTCAGAGACCTCAGGGCCCCAGATCAAGGAGCTAACTGATGAAGAGGCAGAGAGGCTGCAGCTAGAGATTGACCAGAAAAAGGATGCAGAGAATCATGAGGCCCAGCTCAAGAACGGCAGCCTTGACTCCCCAGGGAAGCAGGATACTGAGGAAGATGAGGAGGAAGATGAGAAGGACAAAGGAAAACTGAAGCCCAACCTAGGCAACGGGGCAGACCTGCCCAATTACCGCTGGACCCAGACCCTGTCGGAGCTGGACCTGGCGGTCCCTTTCTGTGTGAACTTCCGGCTGAAAGGGAAGGACATGGTGGTGGACATCCAGCGGCGGCACCTCCGGGTGGGGCTCAAGGGGCAGCCAGCGATCATTGATGGGGAGCTCTACAATGAAGTGAAGGTGGAGGAGAGCTCGTGGCTCATTGAGGACGGCAAGGTGGTGACTGTGCATCTGGAGAAGCTCCCTCCACCCTGGATGAATATCTCCCTTTCTGCTTTCTTCTTTCCCTTATCACACTGATTTGTAACTCTTTGCCTCTGTGTCTCCCCTAGCTGCAGGAAGGGCACAGTCTTGTACCTCTGGATCCAGTGTAGGCCTGCAAGGGTCTCAGGTGCAGGATGTGGATGGGAGAGAGTTTGGTTGTGAAAGGGTTAAGGGGTGATTCCTGGTGCACAGAGCAGGCCACCTCCCACCCTCTGGTTGTTCTCTTCACAGATCAATAAGATGGAGTGGTGGAGCCGCTTGGTGTCCAGTGACCCTGAGATCAACACCAAGAAGATTAACCCTGAGAATTCCAAGGTGAGCCCTGGCTGGTTGGGGGAGCTTCAGCAGGAAGGTGAGGGGCCTCGTTGTTTCCAGAGCTTCACCGATTCCTGTCACTGCCTGCCCTCAGCTGTCAGACCTGGACAGTGAGACTCGCAGCATGGTGGAAAAGATGATGTATGACCAGCGACAGAAGTCCATGGGGCTGCCAACTTCAGACGAACAGAAGAAACAGGAGATTCTGAAGAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:26941457|26945686 hsa-miR-346 1 1 1
chr1:26941457|26945686 hsa-miR-623 1 1 1
chr1:26941457|26945686 hsa-miR-637 1 1 1
chr1:26941457|26945686 hsa-miR-639 1 1 1
chr1:26941457|26945686 hsa-miR-298 1 1 1
chr1:26941457|26945686 hsa-miR-892a 1 1 1
chr1:26941457|26945686 hsa-miR-760 1 1 1
chr1:26941457|26945686 hsa-miR-935 1 1 1
chr1:26941457|26945686 hsa-miR-3135a 1 1 1
chr1:26941457|26945686 hsa-miR-3175 1 1 1
chr1:26941457|26945686 hsa-miR-4448 1 1 1
chr1:26941457|26945686 hsa-miR-3978 1 1 1
chr1:26941457|26945686 hsa-miR-4739 1 1 1
chr1:26941457|26945686 hsa-miR-4780 1 1 1
chr1:26941457|26945686 hsa-miR-5193 1 1 1
chr1:26941457|26945686 hsa-miR-103a-2-5p 1 1 1
chr1:26941457|26945686 hsa-miR-141-5p 1 1 1
chr1:26941457|26945686 hsa-miR-197-3p 1 1 1
chr1:26941457|26945686 hsa-miR-93-3p 1 1 1
chr1:26941457|26945686 hsa-miR-92a-1-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6734-5p 1 1 1
chr1:26941457|26945686 hsa-miR-4731-5p 1 1 1
chr1:26941457|26945686 hsa-miR-7155-5p 1 1 1
chr1:26941457|26945686 hsa-miR-4665-3p 1 1 1
chr1:26941457|26945686 hsa-miR-3150a-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6861-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6825-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6799-5p 1 1 1
chr1:26941457|26945686 hsa-miR-139-3p 1 1 1
chr1:26941457|26945686 hsa-miR-1225-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6873-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6730-5p 1 1 1
chr1:26941457|26945686 hsa-miR-7160-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6762-3p 1 1 1
chr1:26941457|26945686 hsa-miR-3189-5p 1 1 1
chr1:26941457|26945686 hsa-miR-5589-5p 1 1 1
chr1:26941457|26945686 hsa-miR-7110-3p 1 1 1
chr1:26941457|26945686 hsa-miR-1915-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6845-3p 1 1 1
chr1:26941457|26945686 hsa-miR-877-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6760-5p 1 1 1
chr1:26941457|26945686 hsa-miR-5008-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6882-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6740-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6858-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6884-3p 1 1 1
chr1:26941457|26945686 hsa-miR-1226-5p 1 1 1
chr1:26941457|26945686 hsa-miR-4793-5p 1 1 1
chr1:26941457|26945686 hsa-miR-4763-5p 1 1 1
chr1:26941457|26945686 hsa-miR-4707-3p 1 1 1
chr1:26941457|26945686 hsa-miR-5001-3p 1 1 1
chr1:26941457|26945686 hsa-miR-3127-5p 1 1 1
chr1:26941457|26945686 hsa-miR-296-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6823-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6501-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6809-3p 1 1 1
chr1:26941457|26945686 hsa-miR-4446-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6824-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6789-5p 1 1 1
chr1:26941457|26945686 hsa-miR-6742-3p 1 1 1
chr1:26941457|26945686 hsa-miR-7156-3p 1 1 1
chr1:26941457|26945686 hsa-miR-7843-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6892-5p 1 1 1
chr1:26941457|26945686 hsa-miR-4646-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6743-3p 1 1 1
chr1:26941457|26945686 hsa-miR-3158-3p 1 1 1
chr1:26941457|26945686 hsa-miR-4758-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6895-3p 1 1 1
chr1:26941457|26945686 hsa-miR-501-5p 1 1 1
chr1:26941457|26945686 hsa-miR-4632-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6886-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6880-3p 1 1 1
chr1:26941457|26945686 hsa-miR-6732-3p 1 1 1
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:26941457|26945686
ORF Type ORF1
Protein Length 214
Nucleotide Length 642
Protein Sequence LITQTFSHHNQLAQKTRREKRARQEAERREKAERAARLAKEAKSETSGPQIKELTDEEAERLQLEIDQKKDAENHEAQLKNGSLDSPGKQDTEEDEEEDEKDKGKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKGQPAIIDGELYNEVKVEESSWLIEDGKVVTVHLEKLPPPWMNISLSAFFFPLSH*
Nucleotide Sequence CTTATCACACAGACTTTCAGCCACCACAATCAGCTGGCACAGAAGACCCGGCGGGAGAAGAGAGCCCGGCAGGAGGCCGAGCGGCGGGAGAAGGCGGAGCGGGCGGCCAGACTGGCCAAGGAAGCCAAGTCAGAGACCTCAGGGCCCCAGATCAAGGAGCTAACTGATGAAGAGGCAGAGAGGCTGCAGCTAGAGATTGACCAGAAAAAGGATGCAGAGAATCATGAGGCCCAGCTCAAGAACGGCAGCCTTGACTCCCCAGGGAAGCAGGATACTGAGGAAGATGAGGAGGAAGATGAGAAGGACAAAGGAAAACTGAAGCCCAACCTAGGCAACGGGGCAGACCTGCCCAATTACCGCTGGACCCAGACCCTGTCGGAGCTGGACCTGGCGGTCCCTTTCTGTGTGAACTTCCGGCTGAAAGGGAAGGACATGGTGGTGGACATCCAGCGGCGGCACCTCCGGGTGGGGCTCAAGGGGCAGCCAGCGATCATTGATGGGGAGCTCTACAATGAAGTGAAGGTGGAGGAGAGCTCGTGGCTCATTGAGGACGGCAAGGTGGTGACTGTGCATCTGGAGAAGCTCCCTCCACCCTGGATGAATATCTCCCTTTCTGCTTTCTTCTTTCCCTTATCACACTGA

CircID chr1:26941457|26945686
ORF Type ORF2
Protein Length 82
Nucleotide Length 246
Protein Sequence MHSHHLAVLNEPRALLHLHFIVELPINDRWLPLEPHPEVPPLDVHHHVLPFQPEVHTERDRQVQLRQGLGPAVIGQVCPVA*
Nucleotide Sequence ATGCACAGTCACCACCTTGCCGTCCTCAATGAGCCACGAGCTCTCCTCCACCTTCACTTCATTGTAGAGCTCCCCATCAATGATCGCTGGCTGCCCCTTGAGCCCCACCCGGAGGTGCCGCCGCTGGATGTCCACCACCATGTCCTTCCCTTTCAGCCGGAAGTTCACACAGAAAGGGACCGCCAGGTCCAGCTCCGACAGGGTCTGGGTCCAGCGGTAATTGGGCAGGTCTGCCCCGTTGCCTAG

CircID chr1:26941457|26945686
ORF Type ORF3
Protein Length 63
Nucleotide Length 189
Protein Sequence MEWWSRLVSSDPEINTKKINPENSKVSPGWLGELQQEGEGPRCFQSFTDSCHCLPSAVRPGQ*
Nucleotide Sequence ATGGAGTGGTGGAGCCGCTTGGTGTCCAGTGACCCTGAGATCAACACCAAGAAGATTAACCCTGAGAATTCCAAGGTGAGCCCTGGCTGGTTGGGGGAGCTTCAGCAGGAAGGTGAGGGGCCTCGTTGTTTCCAGAGCTTCACCGATTCCTGTCACTGCCTGCCCTCAGCTGTCAGACCTGGACAGTGA

CircID chr1:26941457|26945686
ORF Type ORF4
Protein Length 47
Nucleotide Length 141
Protein Sequence MIAGCPLSPTRRCRRWMSTTMSFPFSRKFTQKGTARSSSDRVWVQR*
Nucleotide Sequence ATGATCGCTGGCTGCCCCTTGAGCCCCACCCGGAGGTGCCGCCGCTGGATGTCCACCACCATGTCCTTCCCTTTCAGCCGGAAGTTCACACAGAAAGGGACCGCCAGGTCCAGCTCCGACAGGGTCTGGGTCCAGCGGTAA

CircID chr1:26941457|26945686
ORF Type ORF5
Protein Length 36
Nucleotide Length 108
Protein Sequence MQRIMRPSSRTAALTPQGSRILRKMRRKMRRTKEN*
Nucleotide Sequence ATGCAGAGAATCATGAGGCCCAGCTCAAGAACGGCAGCCTTGACTCCCCAGGGAAGCAGGATACTGAGGAAGATGAGGAGGAAGATGAGAAGGACAAAGGAAAACTGA

CircID chr1:26941457|26945686
ORF Type ORF6
Protein Length 35
Nucleotide Length 105
Protein Sequence MWMGESLVVKGLRGDSWCTEQATSHPLVVLFTDQ*
Nucleotide Sequence ATGTGGATGGGAGAGAGTTTGGTTGTGAAAGGGTTAAGGGGTGATTCCTGGTGCACAGAGCAGGCCACCTCCCACCCTCTGGTTGTTCTCTTCACAGATCAATAA

CircID chr1:26941457|26945686
ORF Type ORF7
Protein Length 79
Nucleotide Length 237
Protein Sequence APPGGAAAGCPPPCPSLSAGSSHRKGPPGPAPTGSGSSGNWAGLPRCLGWASVFLCPSHLPPHLPQYPASLGSQGCRS*
Nucleotide Sequence GCCCCACCCGGAGGTGCCGCCGCTGGATGTCCACCACCATGTCCTTCCCTTTCAGCCGGAAGTTCACACAGAAAGGGACCGCCAGGTCCAGCTCCGACAGGGTCTGGGTCCAGCGGTAATTGGGCAGGTCTGCCCCGTTGCCTAGGTTGGGCTTCAGTTTTCCTTTGTCCTTCTCATCTTCCTCCTCATCTTCCTCAGTATCCTGCTTCCCTGGGGAGTCAAGGCTGCCGTTCTTGA

CircID chr1:26941457|26945686
ORF Type ORF8
Protein Length 66
Nucleotide Length 198
Protein Sequence EGQRKTEAQPRQRGRPAQLPLDPDPVGAGPGGPFLCELPAEREGHGGGHPAAAPPGGAQGAASDH*
Nucleotide Sequence GAAGGACAAAGGAAAACTGAAGCCCAACCTAGGCAACGGGGCAGACCTGCCCAATTACCGCTGGACCCAGACCCTGTCGGAGCTGGACCTGGCGGTCCCTTTCTGTGTGAACTTCCGGCTGAAAGGGAAGGACATGGTGGTGGACATCCAGCGGCGGCACCTCCGGGTGGGGCTCAAGGGGCAGCCAGCGATCATTGA

CircID chr1:26941457|26945686
ORF Type ORF9
Protein Length 57
Nucleotide Length 171
Protein Sequence VTGIGEALETTRPLTFLLKLPQPARAHLGILRVNLLGVDLRVTGHQAAPPLHLIDL*
Nucleotide Sequence GTGACAGGAATCGGTGAAGCTCTGGAAACAACGAGGCCCCTCACCTTCCTGCTGAAGCTCCCCCAACCAGCCAGGGCTCACCTTGGAATTCTCAGGGTTAATCTTCTTGGTGTTGATCTCAGGGTCACTGGACACCAAGCGGCTCCACCACTCCATCTTATTGATCTGTGA

CircID chr1:26941457|26945686
ORF Type ORF10
Protein Length 55
Nucleotide Length 165
Protein Sequence VKRTTRGWEVACSVHQESPLNPFTTKLSPIHILHLRPLQAYTGSRGTRLCPSCS*
Nucleotide Sequence GTGAAGAGAACAACCAGAGGGTGGGAGGTGGCCTGCTCTGTGCACCAGGAATCACCCCTTAACCCTTTCACAACCAAACTCTCTCCCATCCACATCCTGCACCTGAGACCCTTGCAGGCCTACACTGGATCCAGAGGTACAAGACTGTGCCCTTCCTGCAGCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr1:26941457|26945686 MOV10 0 9 1
chr1:26941457|26945686 PRPF8 0 3 2
chr1:26941457|26945686 SRSF10 0 1 1
chr1:26941457|26945686 TNRC6A 0 2 1
chr1:26941457|26945686 TROVE2 0 3 1
chr1:26941457|26945686 GNL3 0 0 2
chr1:26941457|26945686 DGCR8 1 0 4
chr1:26941457|26945686 PTBP1 0 4 10
chr1:26941457|26945686 METTL14 0 1 0
chr1:26941457|26945686 DHX9 3 0 0
chr1:26941457|26945686 DDX3X 1 0 2
chr1:26941457|26945686 LARP7 0 1 1
chr1:26941457|26945686 ACIN1 0 1 3
chr1:26941457|26945686 RANGAP1 0 2 2
chr1:26941457|26945686 FXR1 0 0 5
chr1:26941457|26945686 FXR2 1 1 9
chr1:26941457|26945686 BUD13 0 2 9
chr1:26941457|26945686 GTF2F1 0 1 0
chr1:26941457|26945686 SLTM 0 1 5
chr1:26941457|26945686 EIF4G2 2 1 6
chr1:26941457|26945686 EIF4G1 0 1 0
chr1:26941457|26945686 DDX42 0 2 3
chr1:26941457|26945686 CSTF2T 1 7 3
chr1:26941457|26945686 VIM 0 1 0
chr1:26941457|26945686 RNF219 0 0 1
chr1:26941457|26945686 XRN2 0 1 3
chr1:26941457|26945686 YWHAG 1 1 5
chr1:26941457|26945686 SLBP 0 0 1
chr1:26941457|26945686 ELAVL1 3 3 5
chr1:26941457|26945686 CELF2 0 0 2
chr1:26941457|26945686 YTHDF1 0 2 0
chr1:26941457|26945686 SRSF7 0 0 3
chr1:26941457|26945686 SRSF1 1 3 19
chr1:26941457|26945686 SRSF3 0 2 0
chr1:26941457|26945686 U2AF1 0 5 2
chr1:26941457|26945686 ADAR 0 2 0
chr1:26941457|26945686 U2AF2 3 11 2
chr1:26941457|26945686 SRSF9 0 0 2
chr1:26941457|26945686 DDX54 3 5 21
chr1:26941457|26945686 PCBP2 0 3 0
chr1:26941457|26945686 SF3A3 0 2 0
chr1:26941457|26945686 ZNF184 0 1 6
chr1:26941457|26945686 LIN28B 2 6 15
chr1:26941457|26945686 LIN28A 0 1 2
chr1:26941457|26945686 BCCIP 0 0 2
chr1:26941457|26945686 RBFOX2 0 12 1
chr1:26941457|26945686 SAFB2 0 0 1
chr1:26941457|26945686 RBM27 0 3 0
chr1:26941457|26945686 RBM22 0 1 1
chr1:26941457|26945686 AIFM1 0 1 3
chr1:26941457|26945686 AGO1 0 4 2
chr1:26941457|26945686 EIF4A3 2 10 14
chr1:26941457|26945686 AGO2 0 6 8
chr1:26941457|26945686 FAM120A 0 6 3
chr1:26941457|26945686 CNBP 0 0 2
chr1:26941457|26945686 UPF1 0 14 0
chr1:26941457|26945686 TAF15 0 1 0
chr1:26941457|26945686 FUS 0 1 0
chr1:26941457|26945686 HNRNPK 0 0 1
chr1:26941457|26945686 HNRNPM 0 1 0
chr1:26941457|26945686 HNRNPC 5 4 1
chr1:26941457|26945686 WTAP 0 1 0
chr1:26941457|26945686 LARP4B 0 2 4
chr1:26941457|26945686 SMNDC1 0 3 2
chr1:26941457|26945686 AUH 0 1 4
chr1:26941457|26945686 HNRNPA1 0 0 1
chr1:26941457|26945686 SND1 0 3 16
chr1:26941457|26945686 IGF2BP1 1 6 4
chr1:26941457|26945686 IGF2BP3 1 8 13
chr1:26941457|26945686 IGF2BP2 5 13 41
chr1:26941457|26945686 HNRNPUL1 0 1 0
chr1:26941457|26945686 TARDBP 0 0 6
chr1:26941457|26945686 YTHDC1 0 8 0
chr1:26941457|26945686 DICER1 0 4 0
chr1:26941457|26945686 FBL 0 6 11
chr1:26941457|26945686 NUMA1 0 1 0
chr1:26941457|26945686 SF3B4 2 3 4
chr1:26941457|26945686 FMR1 1 9 22
chr1:26941457|26945686 CPSF6 0 0 6
chr1:26941457|26945686 CPSF3 0 1 0
chr1:26941457|26945686 NOP58 2 1 15
chr1:26941457|26945686 NOP56 2 1 4
chr1:26941457|26945686 LSM11 0 1 0
chr1:26941457|26945686 HNRNPA2B1 1 0 6
chr1:26941457|26945686 TRA2A 2 0 17
chr1:26941457|26945686 SBDS 0 0 1
chr1:26941457|26945686 MSI2 0 1 9
chr1:26941457|26945686 RBM10 1 9 0
chr1:26941457|26945686 NPM1 0 0 4
chr1:26941457|26945686 TIA1 0 6 0
chr1:26941457|26945686 TARBP2 1 0 1