CircRNA Information

General Information
circRNA Basic Information
CircID chr1:27409935|27410057
Strand +
CircType exon
Host Gene ENSG00000158195.9;
Algorism CIRI2;
Sequence CTCCGCCTCCAATGATAGGCATCCCACCTCCACCACCGCCTGTAGGATTTGGGTCTCCAGGGACGCCTCCACCACCCTCACCCCCATCTTTCCCACCTCACCCTGATTTTGCTGCCCCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:27409935|27410057 hsa-miR-545-5p 0 0 1
chr1:27409935|27410057 hsa-miR-545-3p 0 0 1
chr1:27409935|27410057 hsa-miR-650 1 0 1
chr1:27409935|27410057 hsa-miR-1293 1 0 1
chr1:27409935|27410057 hsa-miR-1294 0 0 1
chr1:27409935|27410057 hsa-miR-548p 0 0 1
chr1:27409935|27410057 hsa-miR-486-3p 1 1 1
chr1:27409935|27410057 hsa-miR-423-5p 1 1 1
chr1:27409935|27410057 hsa-miR-768-5p 0 0 1
chr1:27409935|27410057 hsa-miR-107 1 0 0
chr1:27409935|27410057 hsa-miR-608 1 0 0
chr1:27409935|27410057 hsa-miR-663a 1 0 0
chr1:27409935|27410057 hsa-miR-762 1 0 0
chr1:27409935|27410057 hsa-miR-298 1 0 0
chr1:27409935|27410057 hsa-miR-1268a 1 0 0
chr1:27409935|27410057 hsa-miR-1275 1 0 0
chr1:27409935|27410057 hsa-miR-3141 1 0 0
chr1:27409935|27410057 hsa-miR-3153 1 0 0
chr1:27409935|27410057 hsa-miR-3154 1 0 0
chr1:27409935|27410057 hsa-miR-3175 1 0 0
chr1:27409935|27410057 hsa-miR-3196 1 0 0
chr1:27409935|27410057 hsa-miR-4298 1 0 0
chr1:27409935|27410057 hsa-miR-4271 1 0 0
chr1:27409935|27410057 hsa-miR-3937 0 1 0
chr1:27409935|27410057 hsa-miR-1268b 1 0 0
chr1:27409935|27410057 hsa-miR-4429 1 0 0
chr1:27409935|27410057 hsa-miR-4443 0 1 0
chr1:27409935|27410057 hsa-miR-4466 1 0 0
chr1:27409935|27410057 hsa-miR-4476 1 0 0
chr1:27409935|27410057 hsa-miR-2392 1 1 0
chr1:27409935|27410057 hsa-miR-4507 1 0 0
chr1:27409935|27410057 hsa-miR-4534 1 0 0
chr1:27409935|27410057 hsa-miR-1587 1 0 0
chr1:27409935|27410057 hsa-miR-3960 1 0 0
chr1:27409935|27410057 hsa-miR-4648 1 0 0
chr1:27409935|27410057 hsa-miR-4651 1 1 0
chr1:27409935|27410057 hsa-miR-4654 1 0 0
chr1:27409935|27410057 hsa-miR-4656 1 0 0
chr1:27409935|27410057 hsa-miR-4658 1 0 0
chr1:27409935|27410057 hsa-miR-4688 1 1 0
chr1:27409935|27410057 hsa-miR-4710 1 1 0
chr1:27409935|27410057 hsa-miR-5090 1 0 0
chr1:27409935|27410057 hsa-miR-5194 1 0 0
chr1:27409935|27410057 hsa-miR-5572 1 0 0
chr1:27409935|27410057 hsa-miR-5739 1 0 0
chr1:27409935|27410057 hsa-miR-5787 1 0 0
chr1:27409935|27410057 hsa-miR-6086 1 0 0
chr1:27409935|27410057 hsa-miR-6090 1 0 0
chr1:27409935|27410057 hsa-miR-6134 1 1 0
chr1:27409935|27410057 hsa-miR-8063 1 1 0
chr1:27409935|27410057 hsa-miR-8085 1 0 0
chr1:27409935|27410057 hsa-miR-9500 1 0 0
chr1:27409935|27410057 hsa-miR-12114 1 1 0
chr1:27409935|27410057 hsa-miR-12115 0 1 0
chr1:27409935|27410057 hsa-miR-12128 1 0 0
chr1:27409935|27410057 hsa-miR-370-3p 1 0 0
chr1:27409935|27410057 hsa-miR-6734-5p 1 0 0
chr1:27409935|27410057 hsa-miR-4731-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6747-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6765-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6825-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6799-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6728-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6804-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6833-5p 1 0 0
chr1:27409935|27410057 hsa-miR-5187-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6515-5p 0 1 0
chr1:27409935|27410057 hsa-miR-6880-5p 1 1 0
chr1:27409935|27410057 hsa-miR-7847-3p 1 1 0
chr1:27409935|27410057 hsa-miR-6730-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6890-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6742-5p 1 0 0
chr1:27409935|27410057 hsa-miR-491-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6871-5p 1 0 0
chr1:27409935|27410057 hsa-miR-3151-5p 1 0 0
chr1:27409935|27410057 hsa-miR-3180-3p 1 0 0
chr1:27409935|27410057 hsa-miR-6748-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6796-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6732-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6798-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6881-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6782-5p 1 1 0
chr1:27409935|27410057 hsa-miR-3156-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6786-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6835-5p 1 0 0
chr1:27409935|27410057 hsa-miR-7109-5p 1 0 0
chr1:27409935|27410057 hsa-miR-1226-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6853-5p 1 0 0
chr1:27409935|27410057 hsa-miR-185-5p 1 0 0
chr1:27409935|27410057 hsa-miR-1229-5p 1 0 0
chr1:27409935|27410057 hsa-miR-885-3p 1 0 0
chr1:27409935|27410057 hsa-miR-3127-5p 1 0 0
chr1:27409935|27410057 hsa-miR-1908-5p 1 0 0
chr1:27409935|27410057 hsa-miR-296-3p 1 0 0
chr1:27409935|27410057 hsa-miR-4690-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6823-5p 1 0 0
chr1:27409935|27410057 hsa-miR-7854-3p 1 0 0
chr1:27409935|27410057 hsa-miR-4787-5p 1 0 0
chr1:27409935|27410057 hsa-miR-103a-3p 1 0 0
chr1:27409935|27410057 hsa-miR-149-3p 1 0 0
chr1:27409935|27410057 hsa-miR-6789-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6802-5p 1 0 0
chr1:27409935|27410057 hsa-miR-4750-5p 1 0 0
chr1:27409935|27410057 hsa-miR-10400-5p 1 0 0
chr1:27409935|27410057 hsa-miR-1207-5p 1 0 0
chr1:27409935|27410057 hsa-miR-1233-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6769b-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6778-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6787-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6812-5p 1 1 0
chr1:27409935|27410057 hsa-miR-6816-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6865-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6870-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6737-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6743-5p 1 1 0
chr1:27409935|27410057 hsa-miR-6752-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6756-5p 1 1 0
chr1:27409935|27410057 hsa-miR-6769a-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6803-5p 1 1 0
chr1:27409935|27410057 hsa-miR-6813-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6815-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6819-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6842-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6851-5p 1 1 0
chr1:27409935|27410057 hsa-miR-7110-5p 1 1 0
chr1:27409935|27410057 hsa-miR-10401-5p 1 0 0
chr1:27409935|27410057 hsa-miR-1249-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6751-5p 1 1 0
chr1:27409935|27410057 hsa-miR-6788-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6797-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6808-5p 1 0 0
chr1:27409935|27410057 hsa-miR-7111-5p 1 0 0
chr1:27409935|27410057 hsa-miR-3620-5p 1 0 0
chr1:27409935|27410057 hsa-miR-4728-5p 1 0 0
chr1:27409935|27410057 hsa-miR-5196-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6780b-5p 1 0 0
chr1:27409935|27410057 hsa-miR-10396b-5p 1 0 0
chr1:27409935|27410057 hsa-miR-1237-5p 1 0 0
chr1:27409935|27410057 hsa-miR-328-5p 1 0 0
chr1:27409935|27410057 hsa-miR-4632-5p 1 0 0
chr1:27409935|27410057 hsa-miR-4649-5p 1 0 0
chr1:27409935|27410057 hsa-miR-4725-3p 1 0 0
chr1:27409935|27410057 hsa-miR-4745-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6729-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6738-5p 1 1 0
chr1:27409935|27410057 hsa-miR-6795-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6846-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6848-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6858-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6887-5p 1 0 0
chr1:27409935|27410057 hsa-miR-4769-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6511b-5p 1 1 0
chr1:27409935|27410057 hsa-miR-3940-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6731-5p 1 0 0
chr1:27409935|27410057 hsa-miR-1914-3p 1 0 0
chr1:27409935|27410057 hsa-miR-4665-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6736-5p 1 0 0
chr1:27409935|27410057 hsa-miR-4747-5p 1 0 0
chr1:27409935|27410057 hsa-miR-6891-5p 1 0 0
chr1:27409935|27410057 hsa-miR-4472 1 0 0
chr1:27409935|27410057 hsa-miR-541-3p 1 0 0
chr1:27409935|27410057 hsa-miR-6766-5p 1 1 0
chr1:27409935|27410057 hsa-miR-6785-5p 1 0 0
chr1:27409935|27410057 hsa-miR-3184-5p 0 1 0
chr1:27409935|27410057 hsa-miR-3689d 0 1 0
chr1:27409935|27410057 hsa-miR-6791-5p 1 0 0
chr1:27409935|27410057 hsa-miR-320a-3p 1 0 0
chr1:27409935|27410057 hsa-miR-320b 1 0 0
chr1:27409935|27410057 hsa-miR-320c 1 0 0
chr1:27409935|27410057 hsa-miR-10394-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:27409935|27410057
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MGLQGRLHHPHPHLSHLTLILLPLH
Nucleotide Sequence TTGGGTCTCCAGGGACGCCTCCACCACCCTCACCCCCATCTTTCCCACCTCACCCTGATTTTGCTGCCCCTCCAC
CircID chr1:27409935|27410057
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPP
Nucleotide Sequence ATGATAGGCATCCCACCTCCACCACCGCCTGTAGGATTTGGGTCTCCAGGGACGCCTCCACCACCCTCACCCCCATCTTTCCCACCTCACCCTGATTTTGCTGCCCCTCCA
CircID chr1:27409935|27410057
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MGVRVVEASLETQILQAVVEVGCLSLEAE
Nucleotide Sequence ATGGGGGTGAGGGTGGTGGAGGCGTCCCTGGAGACCCAAATCCTACAGGCGGTGGTGGAGGTGGGATGCCTATCATTGGAGGCGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab