CircNet

General Information

circRNA Basic Information

CircID	chr1:31271379\|31292006
Strand	-
CircType	exon
Host Gene	ENSG00000060688.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	TACTGTGGAATGTCTATGGTGACTGTGATAACTATGCCACACTGAAGGGACACAGTGGAGCAGTGATGGAATTGCATTACAACACAGATGGCAGTATGCTTTTCTCAGCATCCACAGATAAAACCGTGGCTGTGTGGGATAGTGAAACAGGTGAGAGGGTTAAAAGGCTAAAGGGACATACTTCCTTTGTGAATTCCTGTTATCCAGCCAGGAGAGGCCCTCAGCTTGTCTGCACTGGCAGTGACGATGGCACAGTTAAGCATAGATAGATAGATAGCCAGGAATATGTCGGTGCTTTTCGAAGCTCTTATTCCCCAAATTGTCTCCTTCCCCAGCCCTTCCTCCCAAGGTTTTTGGTTTGTATTTTTGCCCCAACTGTTTTTCCTTGCCCCCAGGAACCAGAGGCTAATAATGTCCTTTCCTTTAAATGTTTTCAAGGGAAGTTCCAAGTTAGGCAAAATAAATGTAAGTCCTTTGGGCTCATCCTTCAGAGAGCCACCAGACAGGTAAAAATAAACAATTTTTATTGTTTATTCTTTGACAATAAGAAATAGGCCCCCTTTGCTTCCTCAGTACTAGGAAACCATACTGGGAATATGGGTTATCTTCAAAGCTGTTGCTGAGCAGGAGACAGAGCCAGCACAAGTTAAAACACTACAAAGCCCTTTTACTGGGACTCAGGGAGTTTTTTGTTTCCTTTTTCCTCATTAAGGGTTTGCCGGGTTACTATAAACTTTTGATTAGTTTTGAGAGTTCCAACAGTTGATTCTGACAGATTTTGCTGGTTAATTTGCTGCTTTCGTGGAGGGACAAGCTTTTGTCATTGTTTATTATACTATTTTCACTGACATACCCTCTATTTTTTTAAATGTGGGTTGCAGCCTACTAATGAATTAGTCTCTACGGTTTGAAAAAATTGTCTGATATCCTTGTTGTTCTAAAAAATATATGAACTAAGTAGTTAGGGGAATTCCATTCTAAGAGTATGTTGATTTAACTCTGTTCACTTCAACAAAGAAGTCTGAAAATATAACCGAAGTTTTGTTTCACCAGCCTTCAAATGTCTTGGCAAAATTGAGCACACTGCTTACCATGTGTGTTATTAGGATATCCAGGAGTTAGTGATATAGGATCCCAATTATAGATGTGTTCATGTCCACAAAGTCCTCGTACTTAAGGGATATTTGTACTGTGCAATTGCTTCTTAGAATGATGTTGCTGATAGACTGTCTTGTCCTTTGCTTCAGCTTTGGGACATCCGGAAGAAAGCAGCCATCCAGACATTTCAGAACACGTACCAGGTGTTAGCTGTGACCTTCAATGACACAAGTGATCAGATTATTTCTGGTGGAATAGACAATGATATCAAGGTCTGGGACCTGCGCCAGAACAAGCTAACCTACACCATGAGAGGCCATGCAGATTCAGTGACTGGCCTGAGTTTAAGTTCTGAAGGCTCTTATCTTTTGTCCAATGCAATGGACAATACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr1:31271379\|31292006	hsa-miR-134-5p	1	1
chr1:31271379\|31292006	hsa-miR-132-5p	1	1
chr1:31271379\|31292006	hsa-miR-125a-3p	1	1
chr1:31271379\|31292006	hsa-miR-182-5p	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:31271379\|31292006
ORF Type	ORF1
Protein Length	75
Nucleotide Length	225
Protein Sequence	MSVLFEALIPQIVSFPSPSSQGFWFVFLPQLFFLAPRNQRLIMSFPLNVFKGSSKLGKINVSPLGSSFREPPDR*
Nucleotide Sequence	ATGTCGGTGCTTTTCGAAGCTCTTATTCCCCAAATTGTCTCCTTCCCCAGCCCTTCCTCCCAAGGTTTTTGGTTTGTATTTTTGCCCCAACTGTTTTTCCTTGCCCCCAGGAACCAGAGGCTAATAATGTCCTTTCCTTTAAATGTTTTCAAGGGAAGTTCCAAGTTAGGCAAAATAAATGTAAGTCCTTTGGGCTCATCCTTCAGAGAGCCACCAGACAGGTAA

CircID	chr1:31271379\|31292006
ORF Type	ORF2
Protein Length	68
Nucleotide Length	204
Protein Sequence	MELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKHR*
Nucleotide Sequence	ATGGAATTGCATTACAACACAGATGGCAGTATGCTTTTCTCAGCATCCACAGATAAAACCGTGGCTGTGTGGGATAGTGAAACAGGTGAGAGGGTTAAAAGGCTAAAGGGACATACTTCCTTTGTGAATTCCTGTTATCCAGCCAGGAGAGGCCCTCAGCTTGTCTGCACTGGCAGTGACGATGGCACAGTTAAGCATAGATAG

CircID	chr1:31271379\|31292006
ORF Type	ORF3
Protein Length	52
Nucleotide Length	156
Protein Sequence	MSTKSSYLRDICTVQLLLRMMLLIDCLVLCFSFGTSGRKQPSRHFRTRTRC*
Nucleotide Sequence	ATGTCCACAAAGTCCTCGTACTTAAGGGATATTTGTACTGTGCAATTGCTTCTTAGAATGATGTTGCTGATAGACTGTCTTGTCCTTTGCTTCAGCTTTGGGACATCCGGAAGAAAGCAGCCATCCAGACATTTCAGAACACGTACCAGGTGTTAG

CircID	chr1:31271379\|31292006
ORF Type	ORF4
Protein Length	97
Nucleotide Length	291
Protein Sequence	LPNLELPLKTFKGKDIISLWFLGARKNSWGKNTNQKPWEEGLGKETIWGIRASKSTDIFLAIYLSMLNCAIVTASADKLRASPGWITGIHKGSMSL*
Nucleotide Sequence	TTGCCTAACTTGGAACTTCCCTTGAAAACATTTAAAGGAAAGGACATTATTAGCCTCTGGTTCCTGGGGGCAAGGAAAAACAGTTGGGGCAAAAATACAAACCAAAAACCTTGGGAGGAAGGGCTGGGGAAGGAGACAATTTGGGGAATAAGAGCTTCGAAAAGCACCGACATATTCCTGGCTATCTATCTATCTATGCTTAACTGTGCCATCGTCACTGCCAGTGCAGACAAGCTGAGGGCCTCTCCTGGCTGGATAACAGGAATTCACAAAGGAAGTATGTCCCTTTAG

CircID	chr1:31271379\|31292006
ORF Type	ORF5
Protein Length	37
Nucleotide Length	111
Protein Sequence	MLRKAYCHLCCNAIPSLLHCVPSVWHSYHSHHRHSTV
Nucleotide Sequence	ATGCTGAGAAAAGCATACTGCCATCTGTGTTGTAATGCAATTCCATCACTGCTCCACTGTGTCCCTTCAGTGTGGCATAGTTATCACAGTCACCATAGACATTCCACAGTA

CircID	chr1:31271379\|31292006
ORF Type	ORF6
Protein Length	37
Nucleotide Length	111
Protein Sequence	MSGWLLSSGCPKAEAKDKTVYQQHHSKKQLHSTNIP*
Nucleotide Sequence	ATGTCTGGATGGCTGCTTTCTTCCGGATGTCCCAAAGCTGAAGCAAAGGACAAGACAGTCTATCAGCAACATCATTCTAAGAAGCAATTGCACAGTACAAATATCCCTTAA

CircID	chr1:31271379\|31292006
ORF Type	ORF7
Protein Length	84
Nucleotide Length	252
Protein Sequence	LLQLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNT
Nucleotide Sequence	TTGCTTCAGCTTTGGGACATCCGGAAGAAAGCAGCCATCCAGACATTTCAGAACACGTACCAGGTGTTAGCTGTGACCTTCAATGACACAAGTGATCAGATTATTTCTGGTGGAATAGACAATGATATCAAGGTCTGGGACCTGCGCCAGAACAAGCTAACCTACACCATGAGAGGCCATGCAGATTCAGTGACTGGCCTGAGTTTAAGTTCTGAAGGCTCTTATCTTTTGTCCAATGCAATGGACAATACA

CircID	chr1:31271379\|31292006
ORF Type	ORF8
Protein Length	67
Nucleotide Length	201
Protein Sequence	LVCIFAPTVFPCPQEPEANNVLSFKCFQGKFQVRQNKCKSFGLILQRATRQVKINNFYCLFFDNKK*
Nucleotide Sequence	TTGGTTTGTATTTTTGCCCCAACTGTTTTTCCTTGCCCCCAGGAACCAGAGGCTAATAATGTCCTTTCCTTTAAATGTTTTCAAGGGAAGTTCCAAGTTAGGCAAAATAAATGTAAGTCCTTTGGGCTCATCCTTCAGAGAGCCACCAGACAGGTAAAAATAAACAATTTTTATTGTTTATTCTTTGACAATAAGAAATAG

CircID	chr1:31271379\|31292006
ORF Type	ORF9
Protein Length	55
Nucleotide Length	165
Protein Sequence	LCWLCLLLSNSFEDNPYSQYGFLVLRKQRGPISYCQRINNKNCLFLPVWWLSEG*
Nucleotide Sequence	TTGTGCTGGCTCTGTCTCCTGCTCAGCAACAGCTTTGAAGATAACCCATATTCCCAGTATGGTTTCCTAGTACTGAGGAAGCAAAGGGGGCCTATTTCTTATTGTCAAAGAATAAACAATAAAAATTGTTTATTTTTACCTGTCTGGTGGCTCTCTGAAGGATGA

CircID	chr1:31271379\|31292006
ORF Type	ORF10
Protein Length	51
Nucleotide Length	153
Protein Sequence	QKLVPPRKQQINQQNLSESTVGTLKTNQKFIVTRQTLNEEKGNKKLPESQ*
Nucleotide Sequence	CAAAAGCTTGTCCCTCCACGAAAGCAGCAAATTAACCAGCAAAATCTGTCAGAATCAACTGTTGGAACTCTCAAAACTAATCAAAAGTTTATAGTAACCCGGCAAACCCTTAATGAGGAAAAAGGAAACAAAAAACTCCCTGAGTCCCAGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:31271379\|31292006	NOP56	1	0	1
chr1:31271379\|31292006	MOV10	0	0	1
chr1:31271379\|31292006	ELAVL1	4	8	7
chr1:31271379\|31292006	SF3B4	0	0	1
chr1:31271379\|31292006	FAM120A	0	1	1
chr1:31271379\|31292006	PRPF8	0	4	5
chr1:31271379\|31292006	UPF1	0	1	0
chr1:31271379\|31292006	TAF15	1	0	0
chr1:31271379\|31292006	FMR1	0	2	9
chr1:31271379\|31292006	CPSF6	0	0	1
chr1:31271379\|31292006	TROVE2	0	1	0
chr1:31271379\|31292006	FUS	0	1	0
chr1:31271379\|31292006	GNL3	0	1	0
chr1:31271379\|31292006	SRSF7	1	0	0
chr1:31271379\|31292006	SRSF1	1	1	8
chr1:31271379\|31292006	U2AF2	6	12	14
chr1:31271379\|31292006	SRSF3	1	0	0
chr1:31271379\|31292006	U2AF1	0	0	10
chr1:31271379\|31292006	KHSRP	0	0	2
chr1:31271379\|31292006	SRSF9	0	0	4
chr1:31271379\|31292006	DDX54	0	1	1
chr1:31271379\|31292006	RBM10	2	10	0
chr1:31271379\|31292006	HNRNPA2B1	1	0	0
chr1:31271379\|31292006	SF3A3	1	0	2
chr1:31271379\|31292006	FIP1L1	0	1	1
chr1:31271379\|31292006	PTBP1	0	8	1
chr1:31271379\|31292006	TARDBP	1	3	2
chr1:31271379\|31292006	DHX9	0	1	2
chr1:31271379\|31292006	ACIN1	0	1	0
chr1:31271379\|31292006	DDX3X	1	0	1
chr1:31271379\|31292006	SMNDC1	1	0	3
chr1:31271379\|31292006	MSI2	0	0	2
chr1:31271379\|31292006	HNRNPA1	0	1	0
chr1:31271379\|31292006	LIN28B	0	0	8
chr1:31271379\|31292006	FXR1	0	1	1
chr1:31271379\|31292006	FXR2	0	0	5
chr1:31271379\|31292006	SND1	0	0	1
chr1:31271379\|31292006	IGF2BP1	0	0	5
chr1:31271379\|31292006	BUD13	1	0	3
chr1:31271379\|31292006	IGF2BP3	0	0	1
chr1:31271379\|31292006	IGF2BP2	0	4	6
chr1:31271379\|31292006	AUH	0	0	1
chr1:31271379\|31292006	NOP58	1	6	7
chr1:31271379\|31292006	HNRNPC	10	2	0
chr1:31271379\|31292006	GTF2F1	0	0	1
chr1:31271379\|31292006	CNBP	0	0	2
chr1:31271379\|31292006	DDX42	0	0	1
chr1:31271379\|31292006	CSTF2T	0	1	0
chr1:31271379\|31292006	TIA1	0	1	1
chr1:31271379\|31292006	XRN2	0	0	2
chr1:31271379\|31292006	FBL	2	4	5
chr1:31271379\|31292006	AGO1	0	0	1
chr1:31271379\|31292006	EWSR1	1	1	0
chr1:31271379\|31292006	EIF4A3	1	2	8
chr1:31271379\|31292006	AGO2	2	2	3

CircRNA Information