CircRNA Information

General Information
circRNA Basic Information
CircID chr1:32285689|32286030
Strand -
CircType exon
Host Gene ENSG00000182866.15;
Algorism CIRI2;
Sequence AGAGGGCCAGTACCAGCCTCAGCCTTGAGAGGCCTTGAGAGGCCCTGGGGTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTCTTGTACATGTGTAGCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:32285689|32286030 hsa-miR-18a-5p 0 0 1
chr1:32285689|32286030 hsa-miR-18a-3p 0 0 1
chr1:32285689|32286030 hsa-miR-183-5p 0 0 1
chr1:32285689|32286030 hsa-miR-183-3p 0 0 1
chr1:32285689|32286030 hsa-miR-134-5p 0 0 1
chr1:32285689|32286030 hsa-miR-134-3p 0 0 1
chr1:32285689|32286030 hsa-miR-185-5p 0 0 1
chr1:32285689|32286030 hsa-miR-185-3p 0 0 1
chr1:32285689|32286030 hsa-miR-328-5p 0 0 1
chr1:32285689|32286030 hsa-miR-328-3p 0 0 1
chr1:32285689|32286030 hsa-miR-18b-5p 0 0 1
chr1:32285689|32286030 hsa-miR-18b-3p 0 0 1
chr1:32285689|32286030 hsa-miR-448 0 0 1
chr1:32285689|32286030 hsa-miR-484 0 0 1
chr1:32285689|32286030 hsa-miR-193b-5p 0 0 1
chr1:32285689|32286030 hsa-miR-193b-3p 0 0 1
chr1:32285689|32286030 hsa-miR-589-5p 0 0 1
chr1:32285689|32286030 hsa-miR-589-3p 0 0 1
chr1:32285689|32286030 hsa-miR-592 0 0 1
chr1:32285689|32286030 hsa-miR-597-5p 0 0 1
chr1:32285689|32286030 hsa-miR-597-3p 0 0 1
chr1:32285689|32286030 hsa-miR-624-5p 0 0 1
chr1:32285689|32286030 hsa-miR-624-3p 0 0 1
chr1:32285689|32286030 hsa-miR-641 0 1 1
chr1:32285689|32286030 hsa-miR-298 0 0 1
chr1:32285689|32286030 hsa-miR-892b 0 0 1
chr1:32285689|32286030 hsa-miR-873-5p 0 0 1
chr1:32285689|32286030 hsa-miR-873-3p 0 0 1
chr1:32285689|32286030 hsa-miR-1291 0 0 1
chr1:32285689|32286030 hsa-miR-1293 0 0 1
chr1:32285689|32286030 hsa-miR-1266-5p 0 0 1
chr1:32285689|32286030 hsa-miR-1266-3p 0 0 1
chr1:32285689|32286030 hsa-miR-513c-5p 0 0 1
chr1:32285689|32286030 hsa-miR-513c-3p 0 0 1
chr1:32285689|32286030 hsa-miR-1197 0 0 1
chr1:32285689|32286030 hsa-miR-485-5p 0 0 1
chr1:32285689|32286030 hsa-miR-299-3p 0 0 1
chr1:32285689|32286030 hsa-miR-455-5p 0 0 1
chr1:32285689|32286030 hsa-miR-193a-3p 0 0 1
chr1:32285689|32286030 hsa-miR-153 0 0 1
chr1:32285689|32286030 hsa-miR-612 0 1 0
chr1:32285689|32286030 hsa-miR-762 1 0 0
chr1:32285689|32286030 hsa-miR-3175 0 1 0
chr1:32285689|32286030 hsa-miR-3183 0 1 0
chr1:32285689|32286030 hsa-miR-4306 0 1 0
chr1:32285689|32286030 hsa-miR-4322 1 0 0
chr1:32285689|32286030 hsa-miR-4281 1 0 0
chr1:32285689|32286030 hsa-miR-3652 0 1 0
chr1:32285689|32286030 hsa-miR-3929 0 1 0
chr1:32285689|32286030 hsa-miR-3936 0 1 0
chr1:32285689|32286030 hsa-miR-4430 0 1 0
chr1:32285689|32286030 hsa-miR-3135b 0 1 0
chr1:32285689|32286030 hsa-miR-4478 0 1 0
chr1:32285689|32286030 hsa-miR-4644 0 1 0
chr1:32285689|32286030 hsa-miR-4656 1 0 0
chr1:32285689|32286030 hsa-miR-5093 1 1 0
chr1:32285689|32286030 hsa-miR-5681a 0 1 0
chr1:32285689|32286030 hsa-miR-5739 0 1 0
chr1:32285689|32286030 hsa-miR-12116 0 1 0
chr1:32285689|32286030 hsa-miR-12124 0 1 0
chr1:32285689|32286030 hsa-miR-96-3p 0 1 0
chr1:32285689|32286030 hsa-miR-7114-5p 1 0 0
chr1:32285689|32286030 hsa-miR-7160-5p 0 1 0
chr1:32285689|32286030 hsa-miR-6759-5p 1 1 0
chr1:32285689|32286030 hsa-miR-6721-5p 1 1 0
chr1:32285689|32286030 hsa-miR-6873-3p 0 1 0
chr1:32285689|32286030 hsa-miR-6716-5p 1 0 0
chr1:32285689|32286030 hsa-miR-3180-3p 1 0 0
chr1:32285689|32286030 hsa-miR-6748-5p 0 1 0
chr1:32285689|32286030 hsa-miR-4743-3p 0 1 0
chr1:32285689|32286030 hsa-miR-6878-5p 0 1 0
chr1:32285689|32286030 hsa-miR-199a-5p 0 1 0
chr1:32285689|32286030 hsa-miR-5584-5p 0 1 0
chr1:32285689|32286030 hsa-miR-3678-3p 0 1 0
chr1:32285689|32286030 hsa-miR-1289 0 1 0
chr1:32285689|32286030 hsa-miR-1295b-3p 0 1 0
chr1:32285689|32286030 hsa-miR-4761-5p 0 1 0
chr1:32285689|32286030 hsa-miR-6826-3p 0 1 0
chr1:32285689|32286030 hsa-miR-5089-5p 0 1 0
chr1:32285689|32286030 hsa-miR-3664-3p 0 1 0
chr1:32285689|32286030 hsa-miR-3177-5p 0 1 0
chr1:32285689|32286030 hsa-miR-4763-3p 1 0 0
chr1:32285689|32286030 hsa-miR-5001-5p 0 1 0
chr1:32285689|32286030 hsa-miR-6756-5p 1 1 0
chr1:32285689|32286030 hsa-miR-6788-5p 0 1 0
chr1:32285689|32286030 hsa-miR-6797-5p 0 1 0
chr1:32285689|32286030 hsa-miR-7111-5p 0 1 0
chr1:32285689|32286030 hsa-miR-1915-3p 0 1 0
chr1:32285689|32286030 hsa-miR-10526-3p 0 1 0
chr1:32285689|32286030 hsa-miR-4723-5p 0 1 0
chr1:32285689|32286030 hsa-miR-6731-5p 1 1 0
chr1:32285689|32286030 hsa-miR-6758-5p 0 1 0
chr1:32285689|32286030 hsa-miR-6766-5p 1 0 0
chr1:32285689|32286030 hsa-miR-4667-5p 0 1 0
chr1:32285689|32286030 hsa-miR-6837-5p 0 1 0
chr1:32285689|32286030 hsa-miR-6744-3p 0 1 0
chr1:32285689|32286030 hsa-miR-6783-3p 0 1 0
chr1:32285689|32286030 hsa-miR-6764-5p 0 1 0
chr1:32285689|32286030 hsa-miR-514b-5p 0 1 0
chr1:32285689|32286030 hsa-miR-5197-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:32285689|32286030
ORF Type ORF1
Protein Length 86
Nucleotide Length 258
Protein Sequence MEFLCHSHMAYAHMDSAHESHPHVTHMHLVSVHVSCSCVDSAHVLYMCSLCMYVLDTVQGTPFWLSHFLRPQREGRSLGLTEASAH
Nucleotide Sequence ATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGACACATATGCACCTTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTCTTGTACATGTGTAGCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTTCCTGAGACCACAGAGAGAGGGGAGAAGCCTGGGATTGACAGAAGCTTCTGCCCAC

CircID chr1:32285689|32286030
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence MRGPGVLPLSLQPDLGRWSSCAIVTWPMHIWTLHMNPTHM
Nucleotide Sequence TTGAGAGGCCCTGGGGTTCTCCCCCTTTCTCTCCAGCCTGACTTGGGGAGATGGAGTTCTTGTGCCATAGTCACATGGCCTATGCACATATGGACTCTGCACATGAATCCCACCCACATGTGA

CircID chr1:32285689|32286030
ORF Type ORF3
Protein Length 40
Nucleotide Length 123
Protein Sequence MCLYTCPVVAWTLHMSCTCVACACMSWTLYKVPLSGSPIS
Nucleotide Sequence TTGTGTCTGTACACGTGTCCTGTAGTTGCGTGGACTCTGCACATGTCTTGTACATGTGTAGCCTGTGCATGTATGTCTTGGACACTGTACAAGGTACCCCTTTCTGGCTCTCCCATTTCCTGA

CircID chr1:32285689|32286030
ORF Type ORF4
Protein Length 93
Nucleotide Length 282
Protein Sequence MWSQEMGEPERGTLYSVQDIHAQATHVQDMCRVHATTGHVYRHKVHMCHMWVGFMCRVHMCIGHVTMAQELHLPKSGWRERGRTPGPLKASQG
Nucleotide Sequence CTGTGGTCTCAGGAAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACAGGCTACACATGTACAAGACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACCCCAGGGCCTCTCAAGGCCTCTCAAGGCTGA

CircID chr1:32285689|32286030
ORF Type ORF5
Protein Length 41
Nucleotide Length 126
Protein Sequence MHRLHMYKTCAESTQLQDTCTDTRCICVTCGWDSCAESICA
Nucleotide Sequence ATGCACAGGCTACACATGTACAAGACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAG

CircID chr1:32285689|32286030
ORF Type ORF6
Protein Length 109
Nucleotide Length 327
Protein Sequence MSIPGFSPLSVVSGNGRARKGYLVQCPRHTCTGYTCTRHVQSPRNYRTRVQTQGAYVSHVGGIHVQSPYVHRPCDYGTRTPSPQVRLERKGENPRASQGLSRLRLVLAL
Nucleotide Sequence CTGTCAATCCCAGGCTTCTCCCCTCTCTCTGTGGTCTCAGGAAATGGGAGAGCCAGAAAGGGGTACCTTGTACAGTGTCCAAGACATACATGCACAGGCTACACATGTACAAGACATGTGCAGAGTCCACGCAACTACAGGACACGTGTACAGACACAAGGTGCATATGTGTCACATGTGGGTGGGATTCATGTGCAGAGTCCATATGTGCATAGGCCATGTGACTATGGCACAAGAACTCCATCTCCCCAAGTCAGGCTGGAGAGAAAGGGGGAGAACCCCAGGGCCTCTCAAGGCCTCTCAAGGCTGAGGCTGGTACTGGCCCTC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites