CircRNA Information

General Information
circRNA Basic Information
CircID chr1:32334583|32334800
Strand -
CircType exon
Host Gene ENSG00000175130.6;
Algorism CIRI2;
Sequence CTGCCCCTACCTAGCTACTCATTCTGCTCAGCGCTGGCTGGTGTAGGGCCACTCTCCGGCCCCGAGGGAGTGGATGGCTCTGTAGCCTGGGGCCCTGCCTCTTCTTCTGAGGCTGCACTAGCCTCTGCCCCCTTGGCCTGGGGTTCCTGGCTCTCAGGGGTGGCTGCGGCCTTCCCTTCCTGAGCAGTGCCCTCGTCGCTGCAGGCACCGATCTCCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:32334583|32334800 hsa-miR-130a-5p 0 0 1
chr1:32334583|32334800 hsa-miR-130a-3p 0 0 1
chr1:32334583|32334800 hsa-miR-301a-5p 0 0 1
chr1:32334583|32334800 hsa-miR-301a-3p 0 0 1
chr1:32334583|32334800 hsa-miR-130b-5p 0 0 1
chr1:32334583|32334800 hsa-miR-130b-3p 0 0 1
chr1:32334583|32334800 hsa-miR-328-5p 0 0 1
chr1:32334583|32334800 hsa-miR-328-3p 0 0 1
chr1:32334583|32334800 hsa-miR-196b-5p 0 0 1
chr1:32334583|32334800 hsa-miR-196b-3p 0 0 1
chr1:32334583|32334800 hsa-miR-454-5p 0 0 1
chr1:32334583|32334800 hsa-miR-454-3p 0 0 1
chr1:32334583|32334800 hsa-miR-873-5p 0 0 1
chr1:32334583|32334800 hsa-miR-873-3p 0 0 1
chr1:32334583|32334800 hsa-miR-301b-5p 0 0 1
chr1:32334583|32334800 hsa-miR-301b-3p 0 0 1
chr1:32334583|32334800 hsa-miR-940 1 0 1
chr1:32334583|32334800 hsa-miR-1226-5p 0 0 1
chr1:32334583|32334800 hsa-miR-1226-3p 0 0 1
chr1:32334583|32334800 hsa-miR-663b 0 0 1
chr1:32334583|32334800 hsa-miR-1291 0 0 1
chr1:32334583|32334800 hsa-miR-1250-5p 0 0 1
chr1:32334583|32334800 hsa-miR-1250-3p 0 0 1
chr1:32334583|32334800 hsa-miR-1827 0 0 1
chr1:32334583|32334800 hsa-miR-296-5p 0 0 1
chr1:32334583|32334800 hsa-miR-486-3p 0 0 1
chr1:32334583|32334800 hsa-miR-1184 0 0 1
chr1:32334583|32334800 hsa-miR-767-3p 0 0 1
chr1:32334583|32334800 hsa-miR-1207-5p 0 0 1
chr1:32334583|32334800 hsa-miR-125a-5p 0 0 1
chr1:32334583|32334800 hsa-miR-125b 0 0 1
chr1:32334583|32334800 hsa-miR-550 0 0 1
chr1:32334583|32334800 hsa-miR-196a 0 0 1
chr1:32334583|32334800 hsa-miR-638 1 0 0
chr1:32334583|32334800 hsa-miR-663a 1 0 0
chr1:32334583|32334800 hsa-miR-762 1 0 0
chr1:32334583|32334800 hsa-miR-4706 1 0 0
chr1:32334583|32334800 hsa-miR-4721 1 0 0
chr1:32334583|32334800 hsa-miR-4739 1 0 0
chr1:32334583|32334800 hsa-miR-4767 1 0 0
chr1:32334583|32334800 hsa-miR-6069 1 0 0
chr1:32334583|32334800 hsa-miR-6090 1 0 0
chr1:32334583|32334800 hsa-miR-9899 1 0 0
chr1:32334583|32334800 hsa-miR-17-3p 1 0 0
chr1:32334583|32334800 hsa-miR-6765-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6089 1 0 0
chr1:32334583|32334800 hsa-miR-4640-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6753-5p 1 0 0
chr1:32334583|32334800 hsa-miR-3616-3p 1 0 0
chr1:32334583|32334800 hsa-miR-2277-5p 1 0 0
chr1:32334583|32334800 hsa-miR-4763-3p 1 0 0
chr1:32334583|32334800 hsa-miR-6816-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6743-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6813-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6797-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6879-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6836-5p 1 0 0
chr1:32334583|32334800 hsa-miR-10396b-5p 1 0 0
chr1:32334583|32334800 hsa-miR-4632-5p 1 0 0
chr1:32334583|32334800 hsa-miR-4649-5p 1 0 0
chr1:32334583|32334800 hsa-miR-4685-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6729-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6735-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6795-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6848-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6858-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6887-5p 1 0 0
chr1:32334583|32334800 hsa-miR-6885-5p 1 0 0
chr1:32334583|32334800 hsa-miR-3085-5p 1 0 0
chr1:32334583|32334800 hsa-miR-7843-5p 1 0 0
chr1:32334583|32334800 hsa-miR-525-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:32334583|32334800
ORF Type ORF1
Protein Length 60
Nucleotide Length 183
Protein Sequence LPLPSYSFCSALAGVGPLSGPEGVDGSVAWGPASSSEAALASAPLAWGSWLSGVAAAFPS
Nucleotide Sequence CTGCCCCTACCTAGCTACTCATTCTGCTCAGCGCTGGCTGGTGTAGGGCCACTCTCCGGCCCCGAGGGAGTGGATGGCTCTGTAGCCTGGGGCCCTGCCTCTTCTTCTGAGGCTGCACTAGCCTCTGCCCCCTTGGCCTGGGGTTCCTGGCTCTCAGGGGTGGCTGCGGCCTTCCCTTCCTGA

CircID chr1:32334583|32334800
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MPPWPGVPGSQGWLRPSLPEQCPRRCRHRSP
Nucleotide Sequence CTGCCCCCTTGGCCTGGGGTTCCTGGCTCTCAGGGGTGGCTGCGGCCTTCCCTTCCTGAGCAGTGCCCTCGTCGCTGCAGGCACCGATCTCCC

CircID chr1:32334583|32334800
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MLSAGWCRATLRPRGSGWLCSLGPCLFF
Nucleotide Sequence CTGCTCAGCGCTGGCTGGTGTAGGGCCACTCTCCGGCCCCGAGGGAGTGGATGGCTCTGTAGCCTGGGGCCCTGCCTCTTCTTCTGA

CircID chr1:32334583|32334800
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MGFLALRGGCGLPFLSSALVAAGTDLP
Nucleotide Sequence CTGGGGTTCCTGGCTCTCAGGGGTGGCTGCGGCCTTCCCTTCCTGAGCAGTGCCCTCGTCGCTGCAGGCACCGATCTCCCC

CircID chr1:32334583|32334800
ORF Type ORF5
Protein Length 58
Nucleotide Length 177
Protein Sequence MLRKGRPQPPLRARNPRPRGQRLVQPQKKRQGPRLQSHPLPRGRRVALHQPALSRMSS
Nucleotide Sequence CTGCTCAGGAAGGGAAGGCCGCAGCCACCCCTGAGAGCCAGGAACCCCAGGCCAAGGGGGCAGAGGCTAGTGCAGCCTCAGAAGAAGAGGCAGGGCCCCAGGCTACAGAGCCATCCACTCCCTCGGGGCCGGAGAGTGGCCCTACACCAGCCAGCGCTGAGCAGAATGAGTAGCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites