CircRNA Information

General Information
circRNA Basic Information
CircID chr1:32334583|32334815
Strand -
CircType exon
Host Gene ENSG00000175130.6;
Algorism CIRI2;
Sequence CTGCCCCTACCTAGCTACTCATTCTGCTCAGCGCTGGCTGGTGTAGGGCCACTCTCCGGCCCCGAGGGAGTGGATGGCTCTGTAGCCTGGGGCCCTGCCTCTTCTTCTGAGGCTGCACTAGCCTCTGCCCCCTTGGCCTGGGGTTCCTGGCTCTCAGGGGTGGCTGCGGCCTTCCCTTCCTGAGCAGTGCCCTCGTCGCTGCAGGCACCGATCTCCCCCTGCTCCTGCTCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:32334583|32334815 hsa-miR-130a-5p 0 0 1
chr1:32334583|32334815 hsa-miR-130a-3p 0 0 1
chr1:32334583|32334815 hsa-miR-301a-5p 0 0 1
chr1:32334583|32334815 hsa-miR-301a-3p 0 0 1
chr1:32334583|32334815 hsa-miR-130b-5p 0 0 1
chr1:32334583|32334815 hsa-miR-130b-3p 0 0 1
chr1:32334583|32334815 hsa-miR-328-5p 0 0 1
chr1:32334583|32334815 hsa-miR-328-3p 0 0 1
chr1:32334583|32334815 hsa-miR-196b-5p 0 0 1
chr1:32334583|32334815 hsa-miR-196b-3p 0 0 1
chr1:32334583|32334815 hsa-miR-454-5p 0 0 1
chr1:32334583|32334815 hsa-miR-454-3p 0 0 1
chr1:32334583|32334815 hsa-miR-873-5p 0 0 1
chr1:32334583|32334815 hsa-miR-873-3p 0 0 1
chr1:32334583|32334815 hsa-miR-301b-5p 0 0 1
chr1:32334583|32334815 hsa-miR-301b-3p 0 0 1
chr1:32334583|32334815 hsa-miR-940 1 1 1
chr1:32334583|32334815 hsa-miR-1226-5p 0 0 1
chr1:32334583|32334815 hsa-miR-1226-3p 0 0 1
chr1:32334583|32334815 hsa-miR-663b 0 1 1
chr1:32334583|32334815 hsa-miR-1291 0 0 1
chr1:32334583|32334815 hsa-miR-1250-5p 0 0 1
chr1:32334583|32334815 hsa-miR-1250-3p 0 0 1
chr1:32334583|32334815 hsa-miR-1827 0 0 1
chr1:32334583|32334815 hsa-miR-296-5p 0 0 1
chr1:32334583|32334815 hsa-miR-486-3p 0 1 1
chr1:32334583|32334815 hsa-miR-1184 0 1 1
chr1:32334583|32334815 hsa-miR-767-3p 0 0 1
chr1:32334583|32334815 hsa-miR-1207-5p 1 1 1
chr1:32334583|32334815 hsa-miR-125a-5p 0 1 1
chr1:32334583|32334815 hsa-miR-125b 0 0 1
chr1:32334583|32334815 hsa-miR-550 0 0 1
chr1:32334583|32334815 hsa-miR-196a 0 0 1
chr1:32334583|32334815 hsa-miR-638 1 0 0
chr1:32334583|32334815 hsa-miR-650 0 1 0
chr1:32334583|32334815 hsa-miR-663a 1 0 0
chr1:32334583|32334815 hsa-miR-762 1 0 0
chr1:32334583|32334815 hsa-miR-298 1 0 0
chr1:32334583|32334815 hsa-miR-3175 1 1 0
chr1:32334583|32334815 hsa-miR-3185 0 1 0
chr1:32334583|32334815 hsa-miR-4324 0 1 0
chr1:32334583|32334815 hsa-miR-3665 1 0 0
chr1:32334583|32334815 hsa-miR-3918 0 1 0
chr1:32334583|32334815 hsa-miR-4469 0 1 0
chr1:32334583|32334815 hsa-miR-4493 0 1 0
chr1:32334583|32334815 hsa-miR-3975 0 1 0
chr1:32334583|32334815 hsa-miR-4683 1 1 0
chr1:32334583|32334815 hsa-miR-4688 0 1 0
chr1:32334583|32334815 hsa-miR-4706 1 0 0
chr1:32334583|32334815 hsa-miR-4721 1 0 0
chr1:32334583|32334815 hsa-miR-4739 1 0 0
chr1:32334583|32334815 hsa-miR-4767 1 0 0
chr1:32334583|32334815 hsa-miR-5090 1 1 0
chr1:32334583|32334815 hsa-miR-5192 0 1 0
chr1:32334583|32334815 hsa-miR-5698 1 1 0
chr1:32334583|32334815 hsa-miR-6069 1 0 0
chr1:32334583|32334815 hsa-miR-6081 1 0 0
chr1:32334583|32334815 hsa-miR-6085 1 0 0
chr1:32334583|32334815 hsa-miR-6090 1 0 0
chr1:32334583|32334815 hsa-miR-6165 1 1 0
chr1:32334583|32334815 hsa-miR-7150 1 0 0
chr1:32334583|32334815 hsa-miR-7515 0 1 0
chr1:32334583|32334815 hsa-miR-9899 1 0 0
chr1:32334583|32334815 hsa-miR-128-1-5p 0 1 0
chr1:32334583|32334815 hsa-miR-4433a-3p 1 1 0
chr1:32334583|32334815 hsa-miR-6765-5p 1 0 0
chr1:32334583|32334815 hsa-miR-7106-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6825-5p 1 1 0
chr1:32334583|32334815 hsa-miR-1972 0 1 0
chr1:32334583|32334815 hsa-miR-6510-5p 1 1 0
chr1:32334583|32334815 hsa-miR-6089 1 0 0
chr1:32334583|32334815 hsa-miR-6746-5p 1 0 0
chr1:32334583|32334815 hsa-miR-3677-5p 0 1 0
chr1:32334583|32334815 hsa-miR-874-5p 0 1 0
chr1:32334583|32334815 hsa-miR-6727-5p 0 1 0
chr1:32334583|32334815 hsa-miR-6721-5p 1 1 0
chr1:32334583|32334815 hsa-miR-6732-5p 0 1 0
chr1:32334583|32334815 hsa-miR-6805-5p 0 1 0
chr1:32334583|32334815 hsa-miR-6798-5p 1 1 0
chr1:32334583|32334815 hsa-miR-2467-3p 1 1 0
chr1:32334583|32334815 hsa-miR-4693-3p 0 1 0
chr1:32334583|32334815 hsa-miR-4640-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6753-5p 1 0 0
chr1:32334583|32334815 hsa-miR-4691-3p 0 1 0
chr1:32334583|32334815 hsa-miR-652-5p 0 1 0
chr1:32334583|32334815 hsa-miR-4446-3p 1 0 0
chr1:32334583|32334815 hsa-miR-149-3p 1 0 0
chr1:32334583|32334815 hsa-miR-3616-3p 1 1 0
chr1:32334583|32334815 hsa-miR-6824-5p 1 0 0
chr1:32334583|32334815 hsa-miR-7156-3p 0 1 0
chr1:32334583|32334815 hsa-miR-6781-5p 0 1 0
chr1:32334583|32334815 hsa-miR-7112-5p 0 1 0
chr1:32334583|32334815 hsa-miR-7160-3p 0 1 0
chr1:32334583|32334815 hsa-miR-6869-5p 0 1 0
chr1:32334583|32334815 hsa-miR-6501-3p 1 0 0
chr1:32334583|32334815 hsa-miR-2277-5p 1 0 0
chr1:32334583|32334815 hsa-miR-3664-3p 0 1 0
chr1:32334583|32334815 hsa-miR-4717-5p 0 1 0
chr1:32334583|32334815 hsa-miR-6509-5p 0 1 0
chr1:32334583|32334815 hsa-miR-1273h-5p 1 0 0
chr1:32334583|32334815 hsa-miR-4763-3p 1 1 0
chr1:32334583|32334815 hsa-miR-6816-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6870-5p 1 1 0
chr1:32334583|32334815 hsa-miR-5001-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6726-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6743-5p 1 1 0
chr1:32334583|32334815 hsa-miR-6813-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6722-3p 1 1 0
chr1:32334583|32334815 hsa-miR-6797-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6879-5p 1 1 0
chr1:32334583|32334815 hsa-miR-7111-5p 1 0 0
chr1:32334583|32334815 hsa-miR-5196-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6836-5p 1 1 0
chr1:32334583|32334815 hsa-miR-10396b-5p 1 0 0
chr1:32334583|32334815 hsa-miR-1909-3p 1 0 0
chr1:32334583|32334815 hsa-miR-4632-5p 1 0 0
chr1:32334583|32334815 hsa-miR-4649-5p 1 0 0
chr1:32334583|32334815 hsa-miR-4685-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6729-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6735-5p 1 1 0
chr1:32334583|32334815 hsa-miR-6795-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6848-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6858-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6885-5p 1 0 0
chr1:32334583|32334815 hsa-miR-939-5p 1 0 0
chr1:32334583|32334815 hsa-miR-5586-3p 0 1 0
chr1:32334583|32334815 hsa-miR-3085-5p 1 0 0
chr1:32334583|32334815 hsa-miR-6731-5p 1 0 0
chr1:32334583|32334815 hsa-miR-1271-3p 0 1 0
chr1:32334583|32334815 hsa-miR-7843-5p 1 0 0
chr1:32334583|32334815 hsa-miR-10398-3p 0 1 0
chr1:32334583|32334815 hsa-miR-6876-5p 0 1 0
chr1:32334583|32334815 hsa-miR-550a-5p 0 1 0
chr1:32334583|32334815 hsa-miR-4676-5p 0 1 0
chr1:32334583|32334815 hsa-miR-375-5p 0 1 0
chr1:32334583|32334815 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:32334583|32334815
ORF Type ORF1
Protein Length 60
Nucleotide Length 183
Protein Sequence LPLPSYSFCSALAGVGPLSGPEGVDGSVAWGPASSSEAALASAPLAWGSWLSGVAAAFPS
Nucleotide Sequence CTGCCCCTACCTAGCTACTCATTCTGCTCAGCGCTGGCTGGTGTAGGGCCACTCTCCGGCCCCGAGGGAGTGGATGGCTCTGTAGCCTGGGGCCCTGCCTCTTCTTCTGAGGCTGCACTAGCCTCTGCCCCCTTGGCCTGGGGTTCCTGGCTCTCAGGGGTGGCTGCGGCCTTCCCTTCCTGA
CircID chr1:32334583|32334815
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MPPWPGVPGSQGWLRPSLPEQCPRRCRHRSPPAPAL
Nucleotide Sequence CTGCCCCCTTGGCCTGGGGTTCCTGGCTCTCAGGGGTGGCTGCGGCCTTCCCTTCCTGAGCAGTGCCCTCGTCGCTGCAGGCACCGATCTCCCCCTGCTCCTGCTCTT
CircID chr1:32334583|32334815
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MLSAGWCRATLRPRGSGWLCSLGPCLFF
Nucleotide Sequence CTGCTCAGCGCTGGCTGGTGTAGGGCCACTCTCCGGCCCCGAGGGAGTGGATGGCTCTGTAGCCTGGGGCCCTGCCTCTTCTTCTGA
CircID chr1:32334583|32334815
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MGFLALRGGCGLPFLSSALVAAGTDLPLLLLF
Nucleotide Sequence CTGGGGTTCCTGGCTCTCAGGGGTGGCTGCGGCCTTCCCTTCCTGAGCAGTGCCCTCGTCGCTGCAGGCACCGATCTCCCCCTGCTCCTGCTCTTC
CircID chr1:32334583|32334815
ORF Type ORF5
Protein Length 58
Nucleotide Length 177
Protein Sequence MLRKGRPQPPLRARNPRPRGQRLVQPQKKRQGPRLQSHPLPRGRRVALHQPALSRMSS
Nucleotide Sequence CTGCTCAGGAAGGGAAGGCCGCAGCCACCCCTGAGAGCCAGGAACCCCAGGCCAAGGGGGCAGAGGCTAGTGCAGCCTCAGAAGAAGAGGCAGGGCCCCAGGCTACAGAGCCATCCACTCCCTCGGGGCCGGAGAGTGGCCCTACACCAGCCAGCGCTGAGCAGAATGAGTAGCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab