CircRNA Information

General Information
circRNA Basic Information
CircID chr1:32365909|32366156
Strand +
CircType exon
Host Gene ENSG00000160058.17;
Algorism CIRI2;
Sequence AGTGAACACATTTTGGTTCCTATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAATTTGCCTCTCTTGGGACTCTCCCCCTCCCAGGCATTTTCCATTCCTGGAAAGGCTCCTTTGGGGTTCAGAATCCAGAGACCAAACCCTGACCCACCTCCTTCCTTTCCTCCAGCCCACGCTGGTCTGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCTGTGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:32365909|32366156 hsa-miR-302a-5p 0 0 1
chr1:32365909|32366156 hsa-miR-302a-3p 0 0 1
chr1:32365909|32366156 hsa-miR-302b-5p 0 0 1
chr1:32365909|32366156 hsa-miR-302b-3p 0 0 1
chr1:32365909|32366156 hsa-miR-302c-5p 0 0 1
chr1:32365909|32366156 hsa-miR-302c-3p 0 0 1
chr1:32365909|32366156 hsa-miR-302d-5p 0 0 1
chr1:32365909|32366156 hsa-miR-302d-3p 0 0 1
chr1:32365909|32366156 hsa-miR-372-5p 0 0 1
chr1:32365909|32366156 hsa-miR-372-3p 0 0 1
chr1:32365909|32366156 hsa-miR-373-5p 0 0 1
chr1:32365909|32366156 hsa-miR-373-3p 0 0 1
chr1:32365909|32366156 hsa-miR-326 0 0 1
chr1:32365909|32366156 hsa-miR-133b 0 0 1
chr1:32365909|32366156 hsa-miR-520e-5p 0 0 1
chr1:32365909|32366156 hsa-miR-520e-3p 0 0 1
chr1:32365909|32366156 hsa-miR-519e-5p 0 0 1
chr1:32365909|32366156 hsa-miR-519e-3p 0 0 1
chr1:32365909|32366156 hsa-miR-520b-5p 0 0 1
chr1:32365909|32366156 hsa-miR-520b-3p 0 0 1
chr1:32365909|32366156 hsa-miR-593-5p 0 0 1
chr1:32365909|32366156 hsa-miR-593-3p 0 0 1
chr1:32365909|32366156 hsa-miR-661 0 0 1
chr1:32365909|32366156 hsa-miR-765 1 1 1
chr1:32365909|32366156 hsa-miR-665 0 0 1
chr1:32365909|32366156 hsa-miR-1262 0 0 1
chr1:32365909|32366156 hsa-miR-302e 0 0 1
chr1:32365909|32366156 hsa-miR-324-5p 0 0 1
chr1:32365909|32366156 hsa-miR-1207-3p 0 0 1
chr1:32365909|32366156 hsa-miR-330-5p 0 0 1
chr1:32365909|32366156 hsa-miR-515-3p 0 0 1
chr1:32365909|32366156 hsa-miR-520d-3p 0 0 1
chr1:32365909|32366156 hsa-miR-513a-3p 0 0 1
chr1:32365909|32366156 hsa-miR-519b-3p 0 0 1
chr1:32365909|32366156 hsa-miR-519c-3p 0 0 1
chr1:32365909|32366156 hsa-miR-520a-3p 0 0 1
chr1:32365909|32366156 hsa-miR-520c-3p 0 0 1
chr1:32365909|32366156 hsa-miR-1254 0 0 1
chr1:32365909|32366156 hsa-miR-133a 0 0 1
chr1:32365909|32366156 hsa-miR-519a 0 0 1
chr1:32365909|32366156 hsa-miR-608 1 0 0
chr1:32365909|32366156 hsa-miR-612 1 0 0
chr1:32365909|32366156 hsa-miR-762 1 1 0
chr1:32365909|32366156 hsa-miR-1182 1 0 0
chr1:32365909|32366156 hsa-miR-3131 1 0 0
chr1:32365909|32366156 hsa-miR-3147 1 0 0
chr1:32365909|32366156 hsa-miR-3154 1 0 0
chr1:32365909|32366156 hsa-miR-3175 0 1 0
chr1:32365909|32366156 hsa-miR-3185 1 0 0
chr1:32365909|32366156 hsa-miR-4320 0 1 0
chr1:32365909|32366156 hsa-miR-4259 1 0 0
chr1:32365909|32366156 hsa-miR-4292 0 1 0
chr1:32365909|32366156 hsa-miR-3652 1 1 0
chr1:32365909|32366156 hsa-miR-1268b 1 0 0
chr1:32365909|32366156 hsa-miR-4429 1 0 0
chr1:32365909|32366156 hsa-miR-4430 1 1 0
chr1:32365909|32366156 hsa-miR-4451 1 0 0
chr1:32365909|32366156 hsa-miR-3135b 0 1 0
chr1:32365909|32366156 hsa-miR-4462 1 0 0
chr1:32365909|32366156 hsa-miR-4476 1 1 0
chr1:32365909|32366156 hsa-miR-4481 1 0 0
chr1:32365909|32366156 hsa-miR-4484 1 0 0
chr1:32365909|32366156 hsa-miR-4498 1 1 0
chr1:32365909|32366156 hsa-miR-4505 1 0 0
chr1:32365909|32366156 hsa-miR-4507 1 0 0
chr1:32365909|32366156 hsa-miR-4533 1 1 0
chr1:32365909|32366156 hsa-miR-4534 1 0 0
chr1:32365909|32366156 hsa-miR-1587 1 1 0
chr1:32365909|32366156 hsa-miR-4651 1 0 0
chr1:32365909|32366156 hsa-miR-4656 1 0 0
chr1:32365909|32366156 hsa-miR-4674 1 0 0
chr1:32365909|32366156 hsa-miR-4739 1 1 0
chr1:32365909|32366156 hsa-miR-4741 1 0 0
chr1:32365909|32366156 hsa-miR-5090 1 0 0
chr1:32365909|32366156 hsa-miR-5191 0 1 0
chr1:32365909|32366156 hsa-miR-5703 1 0 0
chr1:32365909|32366156 hsa-miR-5787 1 0 0
chr1:32365909|32366156 hsa-miR-6088 1 0 0
chr1:32365909|32366156 hsa-miR-6124 1 0 0
chr1:32365909|32366156 hsa-miR-6127 1 0 0
chr1:32365909|32366156 hsa-miR-378j 0 1 0
chr1:32365909|32366156 hsa-miR-6129 1 0 0
chr1:32365909|32366156 hsa-miR-6132 1 0 0
chr1:32365909|32366156 hsa-miR-6133 1 0 0
chr1:32365909|32366156 hsa-miR-6860 1 0 0
chr1:32365909|32366156 hsa-miR-7150 1 0 0
chr1:32365909|32366156 hsa-miR-7515 1 0 0
chr1:32365909|32366156 hsa-miR-8060 1 1 0
chr1:32365909|32366156 hsa-miR-8083 0 1 0
chr1:32365909|32366156 hsa-miR-8085 1 0 0
chr1:32365909|32366156 hsa-miR-12118 1 1 0
chr1:32365909|32366156 hsa-miR-150-3p 1 0 0
chr1:32365909|32366156 hsa-miR-4433b-3p 1 0 0
chr1:32365909|32366156 hsa-miR-671-5p 1 1 0
chr1:32365909|32366156 hsa-miR-125b-1-3p 1 0 0
chr1:32365909|32366156 hsa-miR-7106-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6825-5p 1 1 0
chr1:32365909|32366156 hsa-miR-6894-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6799-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6728-5p 1 0 0
chr1:32365909|32366156 hsa-miR-766-5p 1 1 0
chr1:32365909|32366156 hsa-miR-3192-5p 0 1 0
chr1:32365909|32366156 hsa-miR-6757-5p 1 0 0
chr1:32365909|32366156 hsa-miR-7847-3p 1 1 0
chr1:32365909|32366156 hsa-miR-4695-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6730-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6741-5p 1 0 0
chr1:32365909|32366156 hsa-miR-3622b-5p 0 1 0
chr1:32365909|32366156 hsa-miR-6776-5p 1 0 0
chr1:32365909|32366156 hsa-miR-3180-3p 1 0 0
chr1:32365909|32366156 hsa-miR-6748-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6793-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6829-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6732-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6798-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6760-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6881-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6782-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6810-5p 0 1 0
chr1:32365909|32366156 hsa-miR-30b-3p 0 1 0
chr1:32365909|32366156 hsa-miR-5008-5p 1 0 0
chr1:32365909|32366156 hsa-miR-7109-5p 1 0 0
chr1:32365909|32366156 hsa-miR-1226-5p 1 0 0
chr1:32365909|32366156 hsa-miR-204-3p 1 1 0
chr1:32365909|32366156 hsa-miR-1229-5p 1 0 0
chr1:32365909|32366156 hsa-miR-4756-3p 0 1 0
chr1:32365909|32366156 hsa-miR-4787-5p 1 0 0
chr1:32365909|32366156 hsa-miR-4446-3p 1 0 0
chr1:32365909|32366156 hsa-miR-149-3p 1 1 0
chr1:32365909|32366156 hsa-miR-6830-5p 1 1 0
chr1:32365909|32366156 hsa-miR-6781-5p 1 0 0
chr1:32365909|32366156 hsa-miR-664b-5p 1 1 0
chr1:32365909|32366156 hsa-let-7e-5p 1 0 0
chr1:32365909|32366156 hsa-miR-519d-5p 0 1 0
chr1:32365909|32366156 hsa-miR-744-5p 1 0 0
chr1:32365909|32366156 hsa-miR-7113-5p 0 1 0
chr1:32365909|32366156 hsa-miR-3177-3p 1 0 0
chr1:32365909|32366156 hsa-miR-1207-5p 1 0 0
chr1:32365909|32366156 hsa-miR-1273h-5p 0 1 0
chr1:32365909|32366156 hsa-miR-4763-3p 1 0 0
chr1:32365909|32366156 hsa-miR-6769b-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6778-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6816-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6893-5p 1 0 0
chr1:32365909|32366156 hsa-miR-5001-5p 1 1 0
chr1:32365909|32366156 hsa-miR-6726-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6737-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6752-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6754-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6756-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6769a-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6803-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6813-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6815-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6819-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6842-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6851-5p 1 1 0
chr1:32365909|32366156 hsa-miR-7107-5p 1 0 0
chr1:32365909|32366156 hsa-miR-10401-5p 1 0 0
chr1:32365909|32366156 hsa-miR-11181-3p 1 0 0
chr1:32365909|32366156 hsa-miR-1249-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6751-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6774-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6779-5p 1 1 0
chr1:32365909|32366156 hsa-miR-6780a-5p 0 1 0
chr1:32365909|32366156 hsa-miR-6797-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6879-5p 1 0 0
chr1:32365909|32366156 hsa-miR-7111-5p 1 1 0
chr1:32365909|32366156 hsa-miR-186-3p 0 1 0
chr1:32365909|32366156 hsa-miR-3620-5p 1 1 0
chr1:32365909|32366156 hsa-miR-4728-5p 1 1 0
chr1:32365909|32366156 hsa-miR-5196-5p 1 1 0
chr1:32365909|32366156 hsa-miR-10396b-5p 1 0 0
chr1:32365909|32366156 hsa-miR-328-5p 1 0 0
chr1:32365909|32366156 hsa-miR-4632-5p 1 0 0
chr1:32365909|32366156 hsa-miR-4749-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6795-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6846-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6848-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6858-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6883-5p 0 1 0
chr1:32365909|32366156 hsa-miR-6887-5p 1 0 0
chr1:32365909|32366156 hsa-miR-3187-5p 1 0 0
chr1:32365909|32366156 hsa-miR-4723-5p 1 1 0
chr1:32365909|32366156 hsa-miR-939-5p 1 0 0
chr1:32365909|32366156 hsa-miR-4769-5p 1 1 0
chr1:32365909|32366156 hsa-miR-3940-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6856-5p 1 0 0
chr1:32365909|32366156 hsa-miR-4747-5p 1 1 0
chr1:32365909|32366156 hsa-miR-6876-5p 1 1 0
chr1:32365909|32366156 hsa-miR-6891-5p 1 1 0
chr1:32365909|32366156 hsa-miR-6785-5p 1 1 0
chr1:32365909|32366156 hsa-miR-2682-3p 0 1 0
chr1:32365909|32366156 hsa-miR-6791-5p 1 1 0
chr1:32365909|32366156 hsa-miR-520a-5p 0 1 0
chr1:32365909|32366156 hsa-miR-10400-3p 1 0 0
chr1:32365909|32366156 hsa-miR-320a-3p 1 0 0
chr1:32365909|32366156 hsa-miR-320b 1 0 0
chr1:32365909|32366156 hsa-miR-320c 1 0 0
chr1:32365909|32366156 hsa-miR-6859-5p 1 0 0
chr1:32365909|32366156 hsa-miR-6781-3p 0 1 0
chr1:32365909|32366156 hsa-miR-320d 1 0 0
chr1:32365909|32366156 hsa-miR-6843-3p 0 1 0
chr1:32365909|32366156 hsa-miR-3914 0 1 0
chr1:32365909|32366156 hsa-miR-6506-5p 0 1 0
chr1:32365909|32366156 hsa-miR-514b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:32365909|32366156
ORF Type ORF1
Protein Length 73
Nucleotide Length 222
Protein Sequence MVPIPVGKRHLSLGNLPLLGLSPSQAFSIPGKAPLGFRIQRPNPDPPPSFPPAHAGLSPCLPRASSCRMHPSP
Nucleotide Sequence TTGGTTCCTATCCCAGTGGGTAAGAGGCACTTATCTCTGGGAAATTTGCCTCTCTTGGGACTCTCCCCCTCCCAGGCATTTTCCATTCCTGGAAAGGCTCCTTTGGGGTTCAGAATCCAGAGACCAAACCCTGACCCACCTCCTTCCTTTCCTCCAGCCCACGCTGGTCTGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAG
CircID chr1:32365909|32366156
ORF Type ORF2
Protein Length 49
Nucleotide Length 147
Protein Sequence MERLLWGSESRDQTLTHLLPFLQPTLVCPHAFPGLLHVGCTQVLSPAVP
Nucleotide Sequence CTGGAAAGGCTCCTTTGGGGTTCAGAATCCAGAGACCAAACCCTGACCCACCTCCTTCCTTTCCTCCAGCCCACGCTGGTCTGTCCCCATGCCTTCCCAGGGCTTCTTCATGTCGGATGCACCCAAGTCCTTAGCCCAGCTGTGCCA
CircID chr1:32365909|32366156
ORF Type ORF3
Protein Length 66
Nucleotide Length 198
Protein Sequence MGRHGDRPAWAGGKEGGGSGFGLWILNPKGAFPGMENAWEGESPKRGKFPRDKCLLPTGIGTKMCS
Nucleotide Sequence CTGGGAAGGCATGGGGACAGACCAGCGTGGGCTGGAGGAAAGGAAGGAGGTGGGTCAGGGTTTGGTCTCTGGATTCTGAACCCCAAAGGAGCCTTTCCAGGAATGGAAAATGCCTGGGAGGGGGAGAGTCCCAAGAGAGGCAAATTTCCCAGAGATAAGTGCCTCTTACCCACTGGGATAGGAACCAAAATGTGTTCA
CircID chr1:32365909|32366156
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MGASDMKKPWEGMGTDQRGLEERKEVGQGLVSGF
Nucleotide Sequence TTGGGTGCATCCGACATGAAGAAGCCCTGGGAAGGCATGGGGACAGACCAGCGTGGGCTGGAGGAAAGGAAGGAGGTGGGTCAGGGTTTGGTCTCTGGATTCTGA
CircID chr1:32365909|32366156
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MDSEPQRSLSRNGKCLGGGESQERQISQR
Nucleotide Sequence CTGGATTCTGAACCCCAAAGGAGCCTTTCCAGGAATGGAAAATGCCTGGGAGGGGGAGAGTCCCAAGAGAGGCAAATTTCCCAGAGATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab